prot_P-wetherbeei_contig17640.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17640.1.1
Unique Nameprot_P-wetherbeei_contig17640.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length261
Homology
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: UPI00148258CA (DNA polymerase IV n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI00148258CA)

HSP 1 Score: 308 bits (790), Expect = 4.650e-101
Identity = 168/257 (65.37%), Postives = 196/257 (76.26%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 257
            IEPVSLDEAYLDLT  H  G+  AA+ALA+IA RVERE+GITVSIGLS NKFLAKLASE+ KPRG+SVIG  EA  +L  M + KINGVG  T ++L ASG+ +IG LQ +SE +LV+++GK GRRLA +A G D+RAVTP R  KSISAETTF  +T S  EL+A A  L ERVA QL RKG +GG +VLKLKT DFRL TR++RLPN TQRA VL  AA  LI  +ADGR FRLIG+GVD L PA  ADPP LF+
Sbjct:  131 IEPVSLDEAYLDLTEAHESGERAAAEALAVIALRVEREVGITVSIGLSCNKFLAKLASEMDKPRGFSVIGAAEAKAVLAPMSIRKINGVGQATAQRLEASGIASIGQLQALSEMQLVTQYGKFGRRLARYAQGEDERAVTPDRPTKSISAETTFSRDTGSADELIAVARRLGERVATQLQRKGLAGGAVVLKLKTSDFRLLTRSKRLPNATQRASVLAEAAEFLIRRDADGRRFRLIGVGVDDLRPATEADPPGLFD 387          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A6N6T3K4_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3K4_9HYPH)

HSP 1 Score: 297 bits (761), Expect = 1.450e-96
Identity = 167/256 (65.23%), Postives = 188/256 (73.44%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            IEPVSLDEAYLDLT D+      AA+ALA IA RVEREIGITVSIGLS NKFLAKLASEL+KPRG+SVIGR EA   L  + V KI+GVGAVT R++  SGL T+  LQ +SE +LV+RFGK G RLA FAHG DDR VTP R  KSISAETTFR +T S AEL   A  L ERVA QL RKG +G ++ LKLKT DFR+ TR+R LP PTQR   +      LIE EADGR+FRLIG+GV  L  A AADP DLF
Sbjct:  131 IEPVSLDEAYLDLTDDYRTEAPPAAEALAHIAARVEREIGITVSIGLSCNKFLAKLASELEKPRGFSVIGRAEAKSFLAPLSVRKIHGVGAVTARRMEESGLTTVAHLQALSEQDLVARFGKFGHRLAQFAHGNDDRIVTPDRPVKSISAETTFRQDTGSPAELCDVARRLSERVAAQLVRKGVAGSSVTLKLKTSDFRVLTRSRSLPYPTQRQATIFQTVAALIEREADGRTFRLIGVGVSELGSAEAADPTDLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A537RU56_9PROT (DNA polymerase IV n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RU56_9PROT)

HSP 1 Score: 293 bits (749), Expect = 1.130e-94
Identity = 163/256 (63.67%), Postives = 193/256 (75.39%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            +EP+SLDEAYLDLT D+      AA+ALA I+RR+E EIGITVSIGLS NKFLAKLASEL KPRG+SVIGR EA   L  + V KI+GVGAVT R++ ASGL TIGDLQ + + ELV+RFGK G+RLA FA G DDRAVT +R  KSISAE TF  +TAS   L   A  LC+RVA QLARKG +G ++VLKLKT DF + TR+RRL +PTQRA ++  +   LI+ EADGR+FRLIG+GV  L  A AADP DLF
Sbjct:  131 VEPLSLDEAYLDLTDDYRTEAPPAAEALATISRRIESEIGITVSIGLSWNKFLAKLASELHKPRGFSVIGRAEAKGFLAPLSVRKIHGVGAVTARRMEASGLKTIGDLQALKDQELVARFGKFGQRLALFAQGDDDRAVTSYRPVKSISAEITFGQDTASGGRLREIAQGLCDRVAAQLARKGVAGTSIVLKLKTSDFSILTRSRRLAHPTQRASLIFESIAALIDREADGRTFRLIGVGVADLGSATAADPADLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A2E3KYU5_9PROT (DNA polymerase IV n=2 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E3KYU5_9PROT)

HSP 1 Score: 291 bits (745), Expect = 5.810e-94
Identity = 160/258 (62.02%), Postives = 189/258 (73.26%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTAD-HLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 257
            I+PVSLDEAYLDL+ D  + GD   A ALA  A R+E E+GITVSIGL+ NKFLAKLAS+L KPRGYSVIGR EA   L D+PV KINGVGAVT +K+   G+ TIG LQ MS+ ELV R+G+ GRRLA F  G D R V+  RAAKS+SAETTF T+    A+L     P+CERVA++L  KG +GGT+VLKLKT DF++ TRNR+L  PTQ+ D++   A  LIEAEADGR FRLIGIGV  L     ADPPDLFE
Sbjct:  152 IQPVSLDEAYLDLSRDVRVEGDXPPAVALARAALRIEAEVGITVSIGLAYNKFLAKLASDLDKPRGYSVIGREEALDFLSDLPVNKINGVGAVTAKKMAEHGIETIGQLQAMSDDELVGRYGRFGRRLAGFVRGEDRRKVSSGRAAKSVSAETTFVTDLRDAADLREQVRPMCERVADRLKAKGIAGGTVVLKLKTADFQILTRNRQLSQPTQKGDLIFEQAAVLIEAEADGRVFRLIGIGVTDLVSGAKADPPDLFE 409          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A2D6T213_9PROT (DNA polymerase IV n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T213_9PROT)

HSP 1 Score: 289 bits (740), Expect = 1.740e-93
Identity = 157/260 (60.38%), Postives = 190/260 (73.08%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFEGKS 260
            IEPVSLDEAYLDL+AD       AA+ LA  A R+ER++ ITVSIGLS NKFLAKLAS+L+KPRG+S++GR EA   L  +PV KINGVG VT +K+   G+  I +LQ M E++LV+ FGK GRRLA +  G D+R VT HRAAKSISAETTF  + A+  EL     PLCERVA +L R   +G TLVLKLKT DF++ TRNRRLP+PTQ+ADV+   A  LI  EADGR FRLIG+G+  L PA  ADPPDLF G++
Sbjct:  131 IEPVSLDEAYLDLSADVRSDPRPAARVLAETAMRIERDVNITVSIGLSYNKFLAKLASDLEKPRGFSLVGRAEARDFLAPLPVAKINGVGPVTAKKMADLGITEIRELQAMPESQLVTTFGKFGRRLAGYVQGVDERQVTSHRAAKSISAETTFAQDIAAAEELRRVIKPLCERVAGRLERNQVAGHTLVLKLKTADFQVLTRNRRLPHPTQQADVIYEHAADLIAREADGRYFRLIGVGLSDLCPAAEADPPDLFGGRA 390          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A3N5MV63_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MV63_9HYPH)

HSP 1 Score: 286 bits (733), Expect = 2.950e-92
Identity = 159/256 (62.11%), Postives = 192/256 (75.00%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            IEP+SLDEAYLDLT D+      AA+ALA +A R+E E+GITVSIGLS NKFLAKLASEL+KPRG+SVIGR EA   L  + V KI+GVGAVT  ++ ASGL TI DLQ ++EA LV+RFGK G RLA +AHG DDR VTP++A KSISAETTF+ +TAS  EL   A  L ERVA QL RKG +G  +VLKLKT DFR+ +R+RRL +PTQ+A V+      LI+  ADGR+FRLIG+GV  +  A +ADP DLF
Sbjct:  139 IEPLSLDEAYLDLTDDYRTEAPPAAEALAQLAARIESEVGITVSIGLSCNKFLAKLASELEKPRGFSVIGRDEARDFLAPLSVRKIHGVGAVTAGQMEASGLRTIADLQALNEAVLVARFGKFGHRLALYAHGNDDRRVTPYQALKSISAETTFQHDTASAGELRDIAGRLSERVAGQLLRKGVAGSGIVLKLKTSDFRILSRSRRLSHPTQKAQVIYENVAALIDKAADGRTFRLIGVGVVDIEAAASADPLDLF 394          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A3S0GMR3_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0GMR3_9HYPH)

HSP 1 Score: 279 bits (714), Expect = 2.110e-89
Identity = 155/256 (60.55%), Postives = 183/256 (71.48%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            IEPVSLDEAYLDL  +H L    AA+ALA IARRVERE+GITVSIGL+ANKF+AKLASEL+KP G+SVIG  EA   L  + V KI+GVG+ T +++  +G  TIGDLQ +    LV+R+GK G RLA F  G D R VTP R  KSISAETTFR +T+   ELL     L  RVA QLARKG + GT+VLKLKT DF++ TRNRRL +PTQ+A VL  +A  L+  E DGR FRL+GIG   L PA  ADP DLF
Sbjct:  131 IEPVSLDEAYLDLADEHRLRGTCAAEALAEIARRVEREVGITVSIGLAANKFMAKLASELRKPAGFSVIGEAEAIAFLAPLSVRKIHGVGSATAKRMEEAGFNTIGDLQALPAQALVARYGKFGSRLAQFVRGEDSRTVTPDRPTKSISAETTFRRDTSRFDELLETGRGLATRVAAQLARKGLAAGTVVLKLKTADFKVVTRNRRLAHPTQKAAVLSESAEALLAREVDGRFFRLLGIGAADLRPAVEADPVDLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A849U1Q8_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849U1Q8_9HYPH)

HSP 1 Score: 274 bits (700), Expect = 1.850e-87
Identity = 153/257 (59.53%), Postives = 187/257 (72.76%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 257
            IEPVSLDEAYLDL+ +      TAA ALA IA RVERE+ ITVSIGL+ NKFLAKLAS+L KPRG++VIG  EA   L  MPV KI+GVGAVT  ++ A GL TI DLQ  SEAELV  FG  GRRLA+++ G+D+R VTP R  KSISAE TF  NTA+  EL A   P+C R+ +QL RK  SG T+V+KLKT DF+L +R+ RL +PTQ+++++  AA  LI  EADGR FRL+G+G+  LA A  ADPP LF+
Sbjct:  132 IEPVSLDEAYLDLSEEQRYEGPTAASALAHIALRVEREVCITVSIGLAPNKFLAKLASDLDKPRGFAVIGATEAATTLAAMPVKKIHGVGAVTAERMEALGLNTIADLQGRSEAELVGLFGSFGRRLAAYSQGQDERRVTPSRETKSISAEDTFSRNTAASDELCAAIVPMCVRLGSQLVRKRLSGRTVVVKLKTHDFKLISRHARLQHPTQKSELIYDAASKLIAREADGRMFRLVGVGLTDLADAEQADPPGLFD 388          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A1M3LKT4_9PROT (DNA polymerase IV n=1 Tax=Magnetospirillum sp. 64-120 TaxID=1895778 RepID=A0A1M3LKT4_9PROT)

HSP 1 Score: 273 bits (698), Expect = 3.390e-87
Identity = 146/256 (57.03%), Postives = 183/256 (71.48%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            IEP+SLDEAYLDL+ +H L D   A  LA +AR VER++GIT+SIGLS NKFLAK+AS+ +KPRG+SVIGR EA  +L  MPV  I GVGA T  ++  +G+ TIG LQ+M EAEL++RFGK GR L + A G+D R VTP R AKS+S ETTF  +     +L A   PL ++VA +LA+   +G T+V+KLKT DFR  TRN RL  PT+RAD++   A  L+E EADGR+FRLIG+GV  L P   ADPPDLF
Sbjct:  129 IEPLSLDEAYLDLSPEHRLVDRPPAILLARLARAVERQVGITISIGLSYNKFLAKMASDRQKPRGFSVIGRAEAVSMLAQMPVSAIWGVGAATASRMAEAGIDTIGQLQQMPEAELLARFGKFGRHLFAMARGQDSRPVTPDRPAKSVSNETTFARDIRGFDDLRAALVPLADKVAGRLAKADLAGHTVVMKLKTADFRSLTRNHRLAEPTRRADIIAGVATALLEKEADGRAFRLIGVGVTDLCPGGMADPPDLF 384          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: V6F755_MAGGM (DNA polymerase IV n=3 Tax=Rhodospirillaceae TaxID=41295 RepID=V6F755_MAGGM)

HSP 1 Score: 273 bits (697), Expect = 4.800e-87
Identity = 143/256 (55.86%), Postives = 185/256 (72.27%), Query Frame = 0
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 256
            +EP+SLDEAYLDL+ +H L D  AA  LA +AR +ER++GIT+S+GLS NKFLAK+AS+  KPRG+SVIGR EA   L  +PV  I GVGA T  ++ A+G+ TI  LQ+M+EA+LV+RFGK GR L   A G D+R + P R AKS+S ETTFR +    A+LLA   PL E+VA +L + G +G T+VLK+K  DFR+ TRN RL  PT+RAD+++  A+ L+E EADGR+FRLIG+GV  L     ADPPDLF
Sbjct:  129 VEPLSLDEAYLDLSPEHRLSDRPAAVLLARLARAIERQVGITISVGLSYNKFLAKMASDRNKPRGFSVIGRAEAVGQLAGLPVAAIWGVGAATAARMEAAGITTISQLQKMAEADLVARFGKFGRHLFLMARGEDNRPIIPDRPAKSVSNETTFRHDMHRPADLLAALLPLAEKVAARLGKAGLAGHTVVLKMKASDFRVLTRNHRLSEPTRRADIIMRTAQSLLEREADGRAFRLIGVGVADLCSGDNADPPDLF 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00148258CA4.650e-10165.37DNA polymerase IV n=1 Tax=Rhodomicrobium TaxID=106... [more]
A0A6N6T3K4_9HYPH1.450e-9665.23DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A537RU56_9PROT1.130e-9463.67DNA polymerase IV n=1 Tax=Alphaproteobacteria bact... [more]
A0A2E3KYU5_9PROT5.810e-9462.02DNA polymerase IV n=2 Tax=Magnetovibrio sp. TaxID=... [more]
A0A2D6T213_9PROT1.740e-9360.38DNA polymerase IV n=1 Tax=Rhodospirillaceae bacter... [more]
A0A3N5MV63_9HYPH2.950e-9262.11DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A3S0GMR3_9HYPH2.110e-8960.55DNA polymerase IV n=1 Tax=Hyphomicrobiales bacteri... [more]
A0A849U1Q8_9HYPH1.850e-8759.53DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A1M3LKT4_9PROT3.390e-8757.03DNA polymerase IV n=1 Tax=Magnetospirillum sp. 64-... [more]
V6F755_MAGGM4.800e-8755.86DNA polymerase IV n=3 Tax=Rhodospirillaceae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001126UmuC domainPFAMPF00817IMScoord: 1..59
e-value: 2.2E-12
score: 47.2
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..90
score: 21.129072
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 146..246
e-value: 1.8E-16
score: 60.6
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 1..85
e-value: 2.1E-21
score: 78.1
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 142..248
e-value: 6.1E-24
score: 86.4
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 143..242
NoneNo IPR availableGENE3D1.10.150.20coord: 86..133
e-value: 2.0E-14
score: 55.6
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 2..244
IPR022880DNA polymerase IVCDDcd03586PolY_Pol_IV_kappacoord: 1..244
e-value: 7.12923E-92
score: 272.473
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17640contigP-wetherbeei_contig17640:1..783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17640.1.1mRNA_P-wetherbeei_contig17640.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17640 1..783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17640.1.1 ID=prot_P-wetherbeei_contig17640.1.1|Name=mRNA_P-wetherbeei_contig17640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSAN
KFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTAS
GLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISA
ETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRL
STRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAA
DPPDLFEGKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC
IPR017961DNA_pol_Y-fam_little_finger
IPR043128Rev_trsase/Diguanyl_cyclase
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR022880DNApol_IV
IPR043502DNA/RNA_pol_sf