prot_P-wetherbeei_contig17435.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17435.1.1
Unique Nameprot_P-wetherbeei_contig17435.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length251
Homology
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7X8XMX3_9BURK (Flagellar biosynthetic protein FliR n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XMX3_9BURK)

HSP 1 Score: 242 bits (618), Expect = 5.580e-77
Identity = 132/251 (52.59%), Postives = 180/251 (71.71%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMA-QFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMAP 251
            F RI++VFVQAPI+G+ H   PV  GMA+ +  +  P++P P + P     F+ A+L    VG +IG+VSFLVMAAAQFGGEMLDIQMGLS AA  DPASHGAVNLLR++HFY+AM L+L+++GHH L  ++  SF+++P+TYF I         T+ +A + I+L+S+L VIG QIA+PA+GALF+ Q ALG++AR APQMNVFM+SFP+N++IGL LLTL    ++ V+  QF  N   +  ++  M P
Sbjct:   15 FTRIVLVFVQAPIFGSHHIPKPVLAGMAVTMALVMYPHIPVPADMPQDLFPFIGALLTQACVGLLIGFVSFLVMAAAQFGGEMLDIQMGLSVAASFDPASHGAVNLLRKVHFYLAMNLWLVLDGHHALIRALEASFRVIPVTYFHI---------TSDIAFEMIRLTSNLLVIGTQIAAPALGALFITQCALGLLARVAPQMNVFMLSFPLNIAIGLALLTLSLPLIVRVLSVQFDANINHLVHSIKLMVP 256          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A355TRN3_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRN3_9BACT)

HSP 1 Score: 240 bits (613), Expect = 3.400e-76
Identity = 130/251 (51.79%), Postives = 177/251 (70.52%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQ-FIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMAP 251
            F RI ++FVQAPI G+ H  + V +G A  +T    P +P P + P     F  A+L    VG VIG+VSF+V+AAAQFGGEMLDIQMGLS+AA  DPASHGA+NLLR++ FY +M LYL+++GHH+L  +IYKS+Q+VPLTYF          ++  +A   ++++SDL VIG QIA+PA+ ALF+AQ ALG++AR APQMN+FM+SFP+N++IGLILL L    +M VM  QF+ N + + + +  M P
Sbjct:   20 FVRIALIFVQAPILGSNHIPNTVLVGFAAAITVAIYPTLPVPNDMPTDLFPFFGAILTQACVGLVIGFVSFIVIAAAQFGGEMLDIQMGLSSAASFDPASHGAINLLRKVLFYTSMNLYLVLDGHHQLLAAIYKSYQVVPLTYFN---------MSENLAMTLLRMTSDLLVIGTQIAAPALAALFIAQCALGLLARVAPQMNIFMLSFPLNIAIGLILLRLSYPLIMRVMGNQFEINLDLLLQCIGMMKP 261          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7Z9PXS3_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PXS3_9BACT)

HSP 1 Score: 219 bits (559), Expect = 1.990e-67
Identity = 114/245 (46.53%), Postives = 172/245 (70.20%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAV 246
            F RI  +F QAPI  ++H K  +++G+A  +  +  P +P PE FP     ++L +L  I VG  IG+VS+L MAAAQFGGEM+DIQMGLS AA  DP+S G   LL RL+FY+AMLLYL V+GHH+L  +++ SF+++PLT F++      G L   + +FI+ + ++++IGLQ+A+P + ALF+ QVA+G++AR APQMNVFM+SFPMN++IGL+L ++    +M +   QF+ N+++  + +
Sbjct:   16 FVRIAFIFQQAPILASKHIKPQMKVGLAGAMAVVAFPNLPMPEYFPEEPRAYILCILGQIVVGLAIGFVSYLCMAAAQFGGEMMDIQMGLSVAASMDPSSGGTSKLLMRLNFYVAMLLYLGVDGHHQLLRALFYSFRVIPLTEFRV-----SGNL---VLRFIEHTEEIFLIGLQVAAPPLAALFITQVAMGLLARVAPQMNVFMLSFPMNIAIGLMLFSIGLPMIMQLHLKQFEINQDRTIDVI 252          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A3D1Z1Z3_9ACTN (Flagellar biosynthetic protein FliR n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A3D1Z1Z3_9ACTN)

HSP 1 Score: 140 bits (353), Expect = 4.270e-37
Identity = 78/239 (32.64%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    4 RILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQV 242
            R+  VF  API+G+++    V++G+AL  + + LP++P   +  +    F L + + + VGA+IG+ + LV       G+++DIQMG       DP S+ +V+++ +    +A+L++L +NGHH L+ ++ KSF ++PLT F+      G  +T+    F+ + ++++VIGL+I  PA+G L +  +ALG++AR  PQMNVF+++ P+ +++G I +      ++  M   F +  EQ+
Sbjct:   25 RVSGVFFLAPIFGSRNIPTQVKVGLALLTSLVVLPFIPSNVDPGMHMIDFALLLAKELTVGALIGFSATLVFMGFLLAGQIIDIQMGFGMVNVIDPLSNLSVSIMGQFKNLLAILVFLAINGHHFLFTALAKSFDVLPLTMFEF-----GPAITSH---FVGMVANMFVIGLKIGGPAIGVLLITDLALGIIARTVPQMNVFIVAMPLKITVGFIAIISMLSLLLIYMSQIFGQMPEQM 255          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A2M7T6B2_9ACTN (Flagellar biosynthetic protein FliR n=1 Tax=Candidatus Aquicultor secundus TaxID=1973895 RepID=A0A2M7T6B2_9ACTN)

HSP 1 Score: 137 bits (344), Expect = 8.390e-36
Identity = 77/232 (33.19%), Postives = 140/232 (60.34%), Query Frame = 0
Query:    4 RILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPE-NFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIG----LILLTLCSGWVMDV 230
            R+  VF  AP+ G+++    V+IG+AL  +    P++P P+ +  +    F L + + + VGAVIG+ + LV       G+++D QMG S     DP S+ +V+++ + +  +A+L++L +NGH+ L  ++ KSF+IVPLT F I    PG         F+ +  ++++IGL++  PA+G LF+  +A+G+V+RA PQ+N+F++  P+ ++IG    + +L   S +V+ +
Sbjct:   20 RVSGVFFLAPVLGSRNIPTQVKIGLALMTSIALFPFIPSPQIDKSIDMINFTLLIAKELSVGAVIGFTANLVFMGFLLAGQIIDFQMGFSMVNVVDPLSNLSVSIMGQFNNLLAVLIFLAINGHYYLLTALAKSFEIVPLTTFAIT---PG-----VTENFLGMIVNMFIIGLKVGGPAIGVLFMTDLAMGLVSRAVPQINIFIVGMPLKIAIGFATVIAMLAFFSAYVVKI 243          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A7X9BLL9_9FIRM (Flagellar biosynthetic protein FliR n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7X9BLL9_9FIRM)

HSP 1 Score: 134 bits (337), Expect = 8.730e-35
Identity = 79/220 (35.91%), Postives = 129/220 (58.64%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPV-SAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILL 220
            F RI  +F+ API+ ++     V++ +AL + A+  P +  P    + S G FMLA+L  +  G  IG V++LV A  Q  G+++D+QMG       DP S   + L+   ++ +A+L+YL +NGHH L ++I++S+Q +P     +     G   T  + Q   L + ++VI L++A+P V A+F+A +ALG +AR  PQMNVF+I  P+ +  G I+L
Sbjct:   12 FGRISGLFLSAPIYASRQIPAQVKVLLALTLAAMMSPTVSAPYKTAIDSTGMFMLALLVEMVTGYAIGLVAYLVFAGIQLAGQLIDMQMGFGIVNVVDPQSGTQLPLIGSFNYLLALLIYLGMNGHHWLLMAIHQSYQFIP-----VMGPNFGAGFTHYLMQ---LGAQMFVIALKVAAPIVAAIFIADIALGFMARTVPQMNVFLIGIPLKILAGFIML 223          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A4J751_DESRM (Flagellar biosynthetic protein FliR n=1 Tax=Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1) TaxID=349161 RepID=A4J751_DESRM)

HSP 1 Score: 133 bits (334), Expect = 2.500e-34
Identity = 77/235 (32.77%), Postives = 129/235 (54.89%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYM-PYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQF 235
            F R+L      P++        V+ G++L + A+  P + P   +FP    G  LAV   +GVG  IG V   V  A +  G++LD Q+G + AA  DP   G   L+ R  F+M ++LY+ ++GHH L  ++ KS+++VPLT      A   GELT  +   I++ +D + + +QI +P V  L +  +A+G++ + APQ+N+F + FP+ +++G+  L +    +  V KY F
Sbjct:   14 FVRMLSFIFSCPLYAIPGIPPLVKAGLSLVLAALTAPLVEPAAASFPGGLWGLGLAVFSEVGVGLAIGLVCTFVFNAIRIAGQLLDFQIGFAMAAVMDPLGGGMNTLVSRFLFFMTLVLYMNMDGHHALIRALVKSYELVPLTA-----AAMNGELTLLI---IRIFTDTFALAVQICAPVVAVLVITDLAMGLIGKTAPQLNIFQLGFPLKIAVGVSTLAILLPALTSVFKYLF 240          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A496TN29_9BACT (Flagellar biosynthetic protein FliR n=6 Tax=unclassified candidate division KSB1 TaxID=1046950 RepID=A0A496TN29_9BACT)

HSP 1 Score: 132 bits (333), Expect = 3.790e-34
Identity = 82/236 (34.75%), Postives = 136/236 (57.63%), Query Frame = 0
Query:    3 ARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMP-YPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQR 237
            AR+  V    PI+G Q     +RIG+A+ ++ I  P  P  PEN  ++ G F +A+ Q++ VG  I +   L+ A  QFGGE+   +MG S  +  DP S   ++L+ +  +  ++L++L+++GH  L   + +SF+  PL      H  P     A   Q I+ +S+++VIG++I++P + A  +A+V LG++AR  PQ+NVF++ FP+ + IGLI L L     M +  Y FQ+
Sbjct:   19 ARVAAVVAVIPIFGHQAVPPRLRIGLAVFLSIIIFPLAPGVPENVSLTIGQFFVALFQSVCVGLAISFFVILIFAGVQFGGEIAGFEMGFSIISVIDPLSSSRMSLITQFQYIFSLLIFLVLDGHLFLIQGLVESFRTAPLLGV---HFVP-----ASANQLIRATSNIFVIGVKISAPIMVATLLAKVGLGILARTMPQLNVFIVGFPLQIGIGLITLVLS----MPIFFYTFQK 242          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A6N8BKD1_9FIRM (Flagellar biosynthetic protein FliR n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N8BKD1_9FIRM)

HSP 1 Score: 131 bits (329), Expect = 1.380e-33
Identity = 74/219 (33.79%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    4 RILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTL 222
            RI    V AP +  ++F    ++G+ALG+T + +P +P PE    S   F LA+ + + VG  +G++  L+ +A   GG+++DI++G  A+   DP +   V ++ R  F + +   L  N HH L   + KSF+ VP+T  Q   A+  G L      FI+  +D+ V+ L+IA+P +       V+LG+V R APQMN+FM+ FP+ + +G+  L++
Sbjct:   17 RISAFLVAAPFFSLKNFPTKAKVGLALGITVVLVPLVPAPETQFSSIVHFALAISKEVMVGLAMGFICTLIFSALSVGGQLIDIKIGFFASQMFDPMTGAQVTIISRFFFLLGIAFLLATNTHHDLIAILAKSFEAVPVT--QATAARELGLL------FIRAFADMMVLALKIAAPIMAVTLAIDVSLGLVGRTAPQMNIFMLGFPLKIVVGIFTLSI 227          
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Match: A0A2D5ZLC2_9BACT (Flagellar biosynthetic protein FliR n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZLC2_9BACT)

HSP 1 Score: 131 bits (329), Expect = 1.560e-33
Identity = 74/222 (33.33%), Postives = 125/222 (56.31%), Query Frame = 0
Query:    2 FARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSAGGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPASHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHAQPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAPQMNVFMISFPMNLSIGLILLTLC 223
            F R+  +   AP +G ++    VRIG+AL +  I  P +  P+        F+L  L+ I +G  +G+   +V AAAQF G +   QMGL+ A   DP    +++++    + +A+LL+L+ +GH  +  ++  SF++VP+  F +     GG     M   ++L+SDL+ + +Q+A+P + ALF   V LG++AR  PQMNVF++ FP+ + +G     LC
Sbjct:   18 FMRLATLLALAPFYGFKNVSVRVRIGLALLIALILTPVVDVPDLEESPLSQFVLLGLKEIAIGGFLGFALSIVFAAAQFAGHIAGFQMGLAMANTVDPQGQVSLSVVGEFFYVLAVLLFLVFDGHLFVLKTVVHSFELVPVDAFSLN----GGA----MRHMVRLTSDLFGLAVQLAAPVIAALFATSVTLGLIARTVPQMNVFIVGFPIKIGLGFFACILC 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17435.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XMX3_9BURK5.580e-7752.59Flagellar biosynthetic protein FliR n=1 Tax=Burkho... [more]
A0A355TRN3_9BACT3.400e-7651.79Flagellar biosynthetic protein FliR n=1 Tax=bacter... [more]
A0A7Z9PXS3_9BACT1.990e-6746.53Flagellar biosynthetic protein FliR n=1 Tax=Phycis... [more]
A0A3D1Z1Z3_9ACTN4.270e-3732.64Flagellar biosynthetic protein FliR n=3 Tax=Actino... [more]
A0A2M7T6B2_9ACTN8.390e-3633.19Flagellar biosynthetic protein FliR n=1 Tax=Candid... [more]
A0A7X9BLL9_9FIRM8.730e-3535.91Flagellar biosynthetic protein FliR n=1 Tax=Syntro... [more]
A4J751_DESRM2.500e-3432.77Flagellar biosynthetic protein FliR n=1 Tax=Desulf... [more]
A0A496TN29_9BACT3.790e-3434.75Flagellar biosynthetic protein FliR n=6 Tax=unclas... [more]
A0A6N8BKD1_9FIRM1.380e-3333.79Flagellar biosynthetic protein FliR n=1 Tax=Firmic... [more]
A0A2D5ZLC2_9BACT1.560e-3333.33Flagellar biosynthetic protein FliR n=1 Tax=Gemmat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002010Type III secretion system inner membrane R proteinPRINTSPR00953TYPE3IMRPROTcoord: 63..82
score: 25.68
coord: 4..25
score: 23.76
coord: 193..212
score: 38.86
coord: 171..193
score: 27.27
IPR002010Type III secretion system inner membrane R proteinPFAMPF01311Bac_export_1coord: 1..236
e-value: 2.2E-53
score: 181.1
IPR002010Type III secretion system inner membrane R proteinPANTHERPTHR30065FLAGELLAR BIOSYNTHETIC PROTEIN FLIRcoord: 2..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17435contigP-wetherbeei_contig17435:294..1046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17435.1.1mRNA_P-wetherbeei_contig17435.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17435 294..1061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17435.1.1 ID=prot_P-wetherbeei_contig17435.1.1|Name=mRNA_P-wetherbeei_contig17435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MFARILMVFVQAPIWGAQHFKDPVRIGMALGVTAIFLPYMPYPENFPVSA
GGFMLAVLQNIGVGAVIGWVSFLVMAAAQFGGEMLDIQMGLSAAAQSDPA
SHGAVNLLRRLHFYMAMLLYLMVNGHHRLWISIYKSFQIVPLTYFQIQHA
QPGGELTAQMAQFIKLSSDLYVIGLQIASPAVGALFVAQVALGMVARAAP
QMNVFMISFPMNLSIGLILLTLCSGWVMDVMKYQFQRNEEQVDEAVIRMA
P
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002010T3SS_IM_R