prot_P-wetherbeei_contig17418.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17418.1.1
Unique Nameprot_P-wetherbeei_contig17418.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length466
Homology
BLAST of mRNA_P-wetherbeei_contig17418.1.1 vs. uniprot
Match: D7G470_ECTSI (HDAC_interact domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G470_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.200e-13
Identity = 66/207 (31.88%), Postives = 100/207 (48.31%), Query Frame = 0
Query:   23 AGGGKLPRWQSLMFCTQDMYVLLRLHHVLVERLAAATRLCAAA--------ADTSQPTAASEAFTMNGVSASSANTKRAGXXXXXXXXXXXXGEEGTAAARMEALLALTYAWAEGGLSPDRFDEGCRQLVGSGGYILSTLDKILKHFLKYASRVGGDGVAQKLQRLFLHEAALAALSGGGFDVAGYRDRVRWMMRRRRRDELVRVQY 221
            A    LP+ Q +MF T D Y++LR+HH+L ERLA A +LC+ A        A   +   AS   T  G+ A++ + +  G                      +  L   Y   E  ++ +R++EG RQLVG+ GY+L +LDK++   L+   R   D V  KL +L+ +E         G   A YR  V+ ++ R  + E+VRVQY
Sbjct:  986 ASSNPLPQGQEVMFTTTDFYLVLRMHHLLAERLAEAKKLCSEAGLSRQTVVASPQEVLRASAGVTGTGMHAANGDKEEIGY---------------------KTFLGHLYDLLEEKINTERYEEGVRQLVGNQGYVLCSLDKLVVGLLQNLYRASADKVFHKLTQLYYYERTTQT---EGVVPAIYRGHVQELLSRSEK-EVVRVQY 1167          
BLAST of mRNA_P-wetherbeei_contig17418.1.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 4.350e-7
Identity = 51/180 (28.33%), Postives = 79/180 (43.89%), Query Frame = 0
Query:   22 AAGGGKLPRWQSLMFCTQDMYVLLRLHHVLVERLAAATRLCAAAADTSQPTAASEAFTMNGVSASSANTKR----------AGXXXXXXXXXXXXGEEGTAAARM--EALLALTYAWAEGGLSPDRFDEGCRQLVGSGGYILSTLDKILKHFLKYASRVGGDGVAQKLQRLFLHEAALAA 189
            A  G  LP  + ++ CTQ++YVL+R+HHVL +RL  A +L   A D     A  +    N +   S  T             G              +G           LAL YA+ +   S  + ++  +  VG+  Y+L + DK++  FL+    V  D  + K+ +LF H+AAL A
Sbjct:  497 AEAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKL---AEDAKALKAGQKDHPQNPIIRESCETDEEKLMRSLGLGGGDSPLAFSLAPPPSSDGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQAALGA 673          
BLAST of mRNA_P-wetherbeei_contig17418.1.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 6.360e-7
Identity = 54/180 (30.00%), Postives = 81/180 (45.00%), Query Frame = 0
Query:   22 AAGGGKLPRWQSLMFCTQDMYVLLRLHHVLVERLAAATRLCAAAADTSQPTAASEAFTMNGVSASSANTKR----------AGXXXXXXXXXXXXGEEGTAAARM--EALLALTYAWAEGGLSPDRFDEGCRQLVGSGGYILSTLDKILKHFLKYASRVGGDGVAQKLQRLFLHEAALAA 189
            A  G  LP  + ++ CTQ++YVL+R+HHVL +RL  A +L   A D     A  +    N +   S  T             G         XXX   G           LAL YA+ +   S  + ++  +  VG+  Y+L + DK++  FL+    V  D  + K+ +LF H+AAL A
Sbjct:  901 AGAGPVLPESERVLLCTQELYVLMRIHHVLCDRLGKAVKL---AEDAKALKAGQKDHPQNPIIRESCETDEEKVMRSLGLGVGGSPPASSGAXXXSSHGKGGGLRGYSGFLALLYAFTDQSNSELKLEDAVQLTVGNEAYMLFSYDKVINAFLRQLKLVVDDDSSLKMLQLFEHQAALGA 1077          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17418.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G470_ECTSI2.200e-1331.88HDAC_interact domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KFU2_9PHAE4.350e-728.33Sin3a_C domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0X2_ECTSI6.360e-730.00HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031693Sin3, C-terminalPFAMPF16879Sin3a_Ccoord: 36..208
e-value: 9.3E-17
score: 61.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17418contigP-wetherbeei_contig17418:12..1409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17418.1.1mRNA_P-wetherbeei_contig17418.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17418 10..1409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17418.1.1 ID=prot_P-wetherbeei_contig17418.1.1|Name=mRNA_P-wetherbeei_contig17418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=466bp
SAPAAGAAPSAAAAPSSGFAAAAGGGKLPRWQSLMFCTQDMYVLLRLHHV
LVERLAAATRLCAAAADTSQPTAASEAFTMNGVSASSANTKRAGAAAAAT
AGAATTGEEGTAAARMEALLALTYAWAEGGLSPDRFDEGCRQLVGSGGYI
LSTLDKILKHFLKYASRVGGDGVAQKLQRLFLHEAALAALSGGGFDVAGY
RDRVRWMMRRRRRDELVRVQYCANGSGAVEAADGLTEAAADGDGPAASAA
AAADGVSAMDMDGVSAMGVTEDGGGKEAVAPVLLYEWVGDVGAAIGDDDD
ETNRRIEAVTIEQMASVLGIVAEATAEDGGAAVAAAGSAAGDESGGGDAD
GGGGLAVDGGEKGGASGDAVDDMVADPEDETESGGGSGGNGVGGRGGGKG
RHSKRGGRGRGASGRASPGAASIDAGGSDGEGMADAQPQAAAAAAGDGKK
GGGDSAPGEYGGEQDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031693Sin3_C