prot_P-wetherbeei_contig1732.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1732.5.1
Unique Nameprot_P-wetherbeei_contig1732.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length146
Homology
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9HNV4_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HNV4_FAGSY)

HSP 1 Score: 75.1 bits (183), Expect = 6.160e-13
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQP----AATDA--AGSTWLG----------ADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLAL 139
            TR D+++ V SL ++  +PTSA+++AAKRVLRY+ GT   GLL    P      TDA  A   W+           A  PTV   DNT+A+++A       +++H+ + YHF RE V  G + V+ + TV Q+A  LTK +   R L L
Sbjct: 1018 TRPDLSFAVNSLCQHMHSPTSANLVAAKRVLRYVRGTLSHGLLFQPGPMHLTVFTDADWAEVAWIRMLLRDLHVFLAHCPTVWC-DNTSAISLASNPVFHARTKHVEVDYHFVRERVVRGDLNVQFIPTVDQLADLLTKALPTPRFLQL 1165          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9I1C1_FAGSY (Integrase catalytic domain-containing protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I1C1_FAGSY)

HSP 1 Score: 74.7 bits (182), Expect = 8.500e-13
Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQP-----------AATDAAGSTWLGA---------DTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLAL 139
            TR D+++ V SL ++  +PT  H++AAKRVLRY+ GT   G+L    P           AA  AA   W+            +P VI  DNT+A+ +A       +++H+ + YHF RE V  G + V  +ST  Q+A  LTK +   R L L
Sbjct: 1239 TRPDLSFAVNSLCQHMQSPTEGHLVAAKRVLRYVQGTLSHGVLFQPGPRVLTAFTDSDWAAIGAAELAWIRMLLCDFGVILPSPPVIWCDNTSAIALASNPVFHARTKHVEVDYHFVRERVVRGDLRVLFISTNDQLADLLTKALPAPRFLEL 1391          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9IQM4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IQM4_FAGSY)

HSP 1 Score: 69.3 bits (168), Expect = 6.290e-11
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGT--------PMPGLLNYRQPAATDAAGSTWLG----------ADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLALR 140
            TR D+++ V  + +Y + PT+ H+ AAKRVLRY+ GT        P     +  +  A  +A   W+           + TP ++  DN +AL +A       +++HI + +HF RE V    ++V+ VSTV Q+A   TK++   R L LR
Sbjct:  885 TRPDISFAVHQVCQYMLAPTTTHLAAAKRVLRYIRGTLHHGIEFTPWSSTESEYRALAFASAELCWIRTLLKDLGIFISATP-ILWCDNVSALAIASNPVFHARTKHIEVDFHFVRERVLRKDLLVKFVSTVDQLADIFTKSLPTNRFLDLR 1035          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A8J5EUC0_ZINOF (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5EUC0_ZINOF)

HSP 1 Score: 68.9 bits (167), Expect = 8.510e-11
Identity = 53/128 (41.41%), Postives = 67/128 (52.34%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQPAATDAAGSTWLG-----ADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTK 129
            TR D+++ V  L+RY   PTSAH+ AAKR LRY+ GT   GL     PA  D    T L      A TP +I  DN AA+ +A    H  +++HI + YH  RE V    I +  V T  Q A  LTK
Sbjct:  799 TRPDLSFLVNLLSRYMSQPTSAHLTAAKRALRYVKGTMDLGLFF---PATGDNKSFTNLEGYLDKAATPLMI--DNQAAIAIAKDPTHFSRAKHIKVRYHALREAVKDKEIQLIHVPTKNQKADMLTK 921          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9HGK2_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGK2_FAGSY)

HSP 1 Score: 67.8 bits (164), Expect = 1.580e-10
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    6 ITRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQPAATDAAGSTWLGADTPTVIRE-DNTAALTVAMAAGHT---RQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLALR 140
            +TR D+A+ V  L ++  +PTSAH +AAKRVL YL GT   GL     P  +    S +  +D P+ + +  +T  L   + A +     Q +HI I YHF  E V    I ++ +STV Q+A   TK +   R L LR
Sbjct:  180 LTRPDIAFSVNQLCQFMHSPTSAHWIAAKRVLSYLKGTIDHGLF---LPTGSLQL-SAYCESDWPSGLDDCRSTGGLCAIILASNPVCHAQMKHIEIDYHFVHEKVVRNGISIKYISTVDQVADIFTKGLTSARFLLLR 314          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A8J5FA76_ZINOF (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FA76_ZINOF)

HSP 1 Score: 67.8 bits (164), Expect = 1.940e-10
Identity = 59/166 (35.54%), Postives = 78/166 (46.99%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQPAATDA---------AGSTWLGAD------TPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTK------------NVGLKRLLALRACTMG 145
            TR D+++ V  L+RY   PTSAH+ AAKR LRY+ GT   GL     PA  D          + S + GA+      TP +I  DN AA+ +A    H  +++HI + YH  RE +    I +  V T  Q A  LTK             +GLK L  L A   G
Sbjct:  324 TRPDLSFLVNLLSRYMSQPTSAHLAAAKRALRYVKGTMDLGLFF---PATGDNESFTNLEGYSDSDYAGAEDAEKAATPLMI--DNQAAIAIAKDPTHFSRAKHIKVRYHALREAIKDKEIQLIHVPTENQKADMLTKVLRKTLFIHHRDRIGLKSLRFLNATKSG 484          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9IKE8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IKE8_FAGSY)

HSP 1 Score: 66.2 bits (160), Expect = 6.990e-10
Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYRQPAA----TDA-----------AGSTWLGADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLALRACTM 144
            TR D+++ V  + +Y  +PTS H+ AAKR+LRYL GT   GL     P      TDA             S  +  + P ++  +N +   +A       +++HI + ++F RE V    + V+ VST+ Q+    TK++   R L LR+C M
Sbjct:  454 TRPDISFAVHQVCQYMASPTSVHLTAAKRILRYLKGTLHLGLSFRPGPLTLSTFTDADWDDDPDDRRSTSSLLVYLEAP-ILWCENISTFAIASNPVFHARTKHIEVDFNFVRERVLRKDLAVKFVSTLDQLVDIFTKSLPAHRFLDLRSCLM 605          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A8J5F6A5_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F6A5_ZINOF)

HSP 1 Score: 66.2 bits (160), Expect = 7.380e-10
Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLL-----------NYRQPAATDAAGSTWLG-ADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTK 129
            TR D+++ V  L+RY   PTSAH+ AAKR LRY+ GT   GL            N    + +D AG+     A TP +I  DN AA+ +A    H  +++HI + YH  RE V    I +  V T  Q A  LTK
Sbjct:  603 TRPDLSFLVNLLSRYMSQPTSAHLAAAKRALRYVKGTMDLGLFFPPTGDNESFTNLEGYSDSDYAGAEDAKKAATPLMI--DNQAAIAIAKDPTHFSRAKHIKVRYHTLREAVKDKEIQLIHVPTENQKADMLTK 735          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A8J6CYG6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CYG6_9ROSI)

HSP 1 Score: 66.2 bits (160), Expect = 7.540e-10
Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 0
Query:    6 ITRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLNYR-----------QPAATDAAGSTWL----------GADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLALR 140
            +TR D+AY V  + ++   PTS HM+A KR+LRYL GT   GLL  R           +  A  A+  TWL            D PTV  ++++     A    H++  +H+ +   F RE VA+  +VV +V    Q+A  LTK + +      R
Sbjct: 1046 LTRPDIAYTVNRVCQFMHAPTSLHMVALKRILRYLCGTISHGLLFRRSDRLSLVEAEYRSLAIAASDVTWLVSLLTELNLQSVDLPTVWCDNSSFVAVAANPVLHSK-FKHVELDLFFIREKVASSELVVGEVPACDQVADILTKPLSVSAFTQFR 1200          
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Match: A0A2N9EHK2_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EHK2_FAGSY)

HSP 1 Score: 64.3 bits (155), Expect = 3.170e-9
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 0
Query:    7 TRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTP------MPGLLNYRQPAATDAAGSTWLGADTPTVIREDNTAALTVAMAAGHTRQSRHIHICYHFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLAL 139
            TR D+++ V  + +Y  TPTS H+ A KR+LRY+  T        PGLL Y       +   TW     PTV R  +T +   A+A   T    HI + +HF RE V    +VV+ VST  Q+A   TK++  +R + L
Sbjct:  373 TRPDISFAVHQVCQYMSTPTSIHLTATKRLLRYIKCTLHHGIAFTPGLLVY-----LGSNPITWSAKKQPTVSRS-STESEYRALA---TATIEHIEVDFHFIRERVLRKDLVVKFVSTTDQLADIFTKSLPTQRFIDL 502          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1732.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9HNV4_FAGSY6.160e-1338.26CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A0A2N9I1C1_FAGSY8.500e-1335.29Integrase catalytic domain-containing protein n=3 ... [more]
A0A2N9IQM4_FAGSY6.290e-1132.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5EUC0_ZINOF8.510e-1141.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9HGK2_FAGSY1.580e-1036.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J5FA76_ZINOF1.940e-1035.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9IKE8_FAGSY6.990e-1031.37Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A8J5F6A5_ZINOF7.380e-1038.52Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A8J6CYG6_9ROSI7.540e-1032.05Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9EHK2_FAGSY3.170e-935.97Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 68..132
e-value: 5.69617E-19
score: 75.5825

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1732contigP-wetherbeei_contig1732:6021..6458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1732.5.1mRNA_P-wetherbeei_contig1732.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1732 6021..6482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1732.5.1 ID=prot_P-wetherbeei_contig1732.5.1|Name=mRNA_P-wetherbeei_contig1732.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
MYAARITRLDVAYQVRSLARYAVTPTSAHMMAAKRVLRYLIGTPMPGLLN
YRQPAATDAAGSTWLGADTPTVIREDNTAALTVAMAAGHTRQSRHIHICY
HFTRELVAAGVIVVEQVSTVGQMASGLTKNVGLKRLLALRACTMG*
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