prot_P-wetherbeei_contig1728.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1728.4.1
Unique Nameprot_P-wetherbeei_contig1728.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1262
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1728.4.1 vs. uniprot
Match: A0A7R9ZLS6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLS6_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.020e-5
Identity = 31/77 (40.26%), Postives = 41/77 (53.25%), Query Frame = 0 
Query:  344 FESVIWPHLTGAHKWTVDHGNRVNDCYYLPPGVKRGKPFLVRIHYFDSQKQVIKHMLTNQPKFGAILEQARGAREEY 420
            F   IWP L     WT++ GNR ND Y +PPGVKRG  F  R  +FDS  Q++   + N P++   +E  R     Y
Sbjct:  281 FWGTIWPCLKDELGWTIERGNRPNDIYCMPPGVKRGVGFQNRKDFFDSL-QLVMFFIMNDPRWKDRMEVKRSINLYY 356
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1728.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7R9ZLS6_9STRA1.020e-540.26Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 907..955
e-value: 0.0029
score: 26.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 972..1070
e-value: 9.6E-6
score: 27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 771..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1088..1219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1203..1219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1155..1190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 818..866
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 761..789
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 999..1064
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 907..954

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1728contigP-wetherbeei_contig1728:1887..6351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1728.4.1mRNA_P-wetherbeei_contig1728.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1728 1819..6718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1728.4.1 ID=prot_P-wetherbeei_contig1728.4.1|Name=mRNA_P-wetherbeei_contig1728.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1262bp
MFENGDPTAVGQNGAAGDASSSGVVGDGFSAQGQASVDAAAAATAALRFA
GVSANSLQGQPLQGSGANPAMNPMLPAMGAMQSHANHAPGPNAHAAGLAM
SAQLQAALRQQFGHQLGLVLPHTAGGVVLPPSLLPPGVVAALGGVGGAAS
FITPAQGVQASNAAKAGAYNAFGAIGGVNGLAGAGGSTGTSAPQGSGAAP
TEIRGPAEGADASSGSKQKRIGEDSGHGSSSGAGGTSGGEQPGRAAAAAT
DGAGRVPPLIAAGTEGVPPLDAQASASAASGATAAGAVAGACSGGGKGGK
AGGKSGKGRKGGKDGGGGGGGKARAAAADDGDDTYKTYGGKVAFESVIWP
HLTGAHKWTVDHGNRVNDCYYLPPGVKRGKPFLVRIHYFDSQKQVIKHML
TNQPKFGAILEQARGAREEYIRSRPAQRRAKLGRGGQGLLMKGMYPPRSS
REGDDYQAEIWDVGVMERGAAPVADAAEVPVLPPRPLSPPLPPEPEPEAG
TPAAAGAPAAAGASCANGGGGSSSGGGGGGGGTTGPGASPALREVFGVPT
AAAKVAGASSTAGSASVPAGATSAAGAGTAFAAGDCASAAGAEAAIAALS
PDAVEFGAEEKVRPVAWTAKEAGRHRVRPQQDGCDPAWLRRNGGLVWRPP
PGELELLELERQQRRNSVAPNVASPDDTAGAAAAAAAGTNSGAAVANGVA
MAAANSRTAAANGAAGSSSSGGAGDEGLAMARELEATAAVAAKAAAAAAA
ARVTAPEGPAGGDVDISTAGVATSDGGSSSSPQAAPTDTVPAADLDVGEV
AAAAMAAAAEAGAAATAMAEDTPAGSEAAPTGAAAAVKGESELEPQPEPE
PEPVIPGAAAAAANGLTQHRPGVPIDFELQTLMRHGYNEAVAAAAVAAAA
DGGRARVPRPWGKEEEHEYGELVYAHYKDFSTMQMALENRTLEEVADRYY
QVWKPRARLYVPPAAAVSGRAPSNTALLRSPQSYACLKARWRSERARRDM
YEGPEMFEYARCVVCGADTGEEVLLCDHEKQNGKSCDKPTHFSCAKVDPA
AAPEKFFCVQCRALDNAGSGSGSGGHGSGGNSGAVHCGGGGGGGGGKGGR
TSSSSVNGASSKRKKDSGDSGESAPKKRGRPVGSKNSSGGGAISDGGKGD
SSGGDGSHGSKSNSGGRSGGGKGAGNSKSASSSSGGGGGGGSSKGHSGGL
SGGKSPRSRTASPTNPDAAAAAATASAFNFDAGSLGVDADDYDMANFNEL
FGEGDASMDLV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD
IPR009057Homeobox-like_sf