prot_P-wetherbeei_contig1722.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1722.6.1
Unique Nameprot_P-wetherbeei_contig1722.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length126
Homology
BLAST of mRNA_P-wetherbeei_contig1722.6.1 vs. uniprot
Match: A0A7S2FYU3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.090e-12
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   42 SLLRSVGRSSASFATVIGVLNGVSCSMEKLRGERDWRNQAVGGFAAGALIAMSSRNPTVIMSSALGTALLAGAL 115
            +++ S+GRSS  F   +G+ NGVSC++E +R  +DW N   GG AAG    +++R+P +IM SALGT ++  A+
Sbjct:   45 AVVSSMGRSSLGFGLFLGIFNGVSCNVETIRKRKDWVNSFAGGAAAGTFAGLNTRDPRMIMYSALGTGVVTSAV 118          
BLAST of mRNA_P-wetherbeei_contig1722.6.1 vs. uniprot
Match: A0A484LJY1_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484LJY1_9ASTE)

HSP 1 Score: 53.5 bits (127), Expect = 2.240e-6
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   49 RSSASFATVIGVLNGVSCSMEKLRGERDWRNQAVGGFAAGALIAMSSRN--PTVIMSSALGTALLAGA 114
            R  A + TV GV  G+   +E++RGERDW+N  VGG  AGALI+ +S N    ++M +  G A+   A
Sbjct:   73 REGAYWGTVAGVYAGMEFGVERIRGERDWKNAMVGGALAGALISAASSNNREKIVMDAITGGAIATAA 140          
BLAST of mRNA_P-wetherbeei_contig1722.6.1 vs. uniprot
Match: A0A7S2LNR3_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LNR3_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.470e-5
Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 0
Query:   49 RSSASFATVIGVLNGVSCSMEKLRGERDWRNQAVGGFAAGALIAMSSRNPTVIMSSALGTALLAGAL 115
            R +  F  V G    V C  E+ RGERD  N A+GG AAG L+A  +R    +  +ALGTALL  A+
Sbjct:   86 RPAVFFGAVAGAFATVDCIAEEARGERDSWNAAIGGAAAGMLMAAKTRRFDYMAGAALGTALLCFAV 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1722.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2FYU3_9STRA2.090e-1243.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A484LJY1_9ASTE2.240e-642.65Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A7S2LNR3_9STRA6.470e-544.78Mitochondrial import inner membrane translocase su... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 2..110
e-value: 1.6E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1722contigP-wetherbeei_contig1722:4154..4531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1722.6.1mRNA_P-wetherbeei_contig1722.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1722 4154..4531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1722.6.1 ID=prot_P-wetherbeei_contig1722.6.1|Name=mRNA_P-wetherbeei_contig1722.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
AGVSWGVVNEFWAGFPADGATWRERSAAVGSMQGGLKVAAPSLLRSVGRS
SASFATVIGVLNGVSCSMEKLRGERDWRNQAVGGFAAGALIAMSSRNPTV
IMSSALGTALLAGALHNVLAPKQPT*
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