prot_P-wetherbeei_contig16949.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16949.2.1
Unique Nameprot_P-wetherbeei_contig16949.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length202
Homology
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL)

HSP 1 Score: 148 bits (374), Expect = 3.350e-40
Identity = 88/204 (43.14%), Postives = 122/204 (59.80%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDR--SVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            MKDLG  KY LG++I+       +SI Q+KYI+D+L  +++  C H    P  + +RL K+  P   +E   M+++ Y+ AVG L Y+   TR D+S  V  +S+  SNP   HW AV+  ++Y+ GT   +L    F   G  ++IGY+D+DW GD D+RRSTTGY F+          GAIS N + QPTVALSS EAEYMA
Sbjct:   34 MKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDC-HPVSTPFESSERLDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRILRYLKGTINNRLL---FNKRGNGEIIGYTDADWGGDVDSRRSTTGYVFMFQ-------GGAISWNVKRQPTVALSSCEAEYMA 226          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A0A9X648_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X648_LYGHE)

HSP 1 Score: 148 bits (373), Expect = 5.950e-39
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITF--GDRSVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            M DLG   ++LG ++T     + V ISQ++YI DMLK ++MH C    + P    ++L+K   P+  E++  M+ + Y+ AVG LL+ + V+R D++  V  +SR   NP   HWGAV+  ++Y+ G+   KL  G    E    ++GYSDSDWA D D RRS TGY F+   S        IS +++ QPT+ALS+TEAEYMA
Sbjct:  150 MTDLGEANFVLGFKLTRDRAKKKVWISQERYISDMLKRFNMHECNPV-DTPLSPNEKLSKEQSPVSAEDAAKMKNVPYQEAVGSLLFASQVSRPDINFAVSYVSRFSKNPGTAHWGAVKRILRYLKGSAHWKLEFGG-GMEVVTDIVGYSDSDWASDQDERRSVTGYIFMKNGSP-------ISWSTKKQPTIALSTTEAEYMA 344          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.260e-37
Identity = 90/204 (44.12%), Postives = 120/204 (58.82%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDRS--VSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            M DLG LKY LGME+   D+S  VS+ Q K++  +L  + M  C   K  P   G +LTKA      +    M+ + YR AVG ++YL + TR DL+  V  LS+  ++P PTHW A++  ++Y+  T    +    F   G  +LIGYSD+DWAGD +TRRST+GY FVL         G I+  S+ Q TVALSSTEAEYMA
Sbjct:  217 MSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKT-PQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIR---FAGSGDGELIGYSDADWAGDIETRRSTSGYVFVLN-------GGCITWRSKKQRTVALSSTEAEYMA 409          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A1W7R6K6_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=4 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6K6_AEDAL)

HSP 1 Score: 147 bits (371), Expect = 2.430e-37
Identity = 88/204 (43.14%), Postives = 120/204 (58.82%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDR--SVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            MKDLG  KY LG++I+       +SI Q+KYI+D+L  +++  C H    P  + +RL K+  P    E   M+++ Y+ AVG L Y+   TR D+S  V  +S+  SNP   HW AV+   +Y+ GT   +L    F   G  ++IGY+D+DW GD D+RRSTTGY F+          GAIS N + QPTVALSS EAEYMA
Sbjct: 1072 MKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLADC-HPVSTPFESSERLDKSMTPKSQNEMEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRIFRYLKGTINNRLL---FNKRGNGEIIGYTDADWGGDVDSRRSTTGYVFMFQ-------GGAISWNVKRQPTVALSSCEAEYMA 1264          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A182GR78_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR78_AEDAL)

HSP 1 Score: 140 bits (353), Expect = 4.990e-37
Identity = 84/204 (41.18%), Postives = 119/204 (58.33%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDRS--VSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            MKDLG   + LG+ I    R   +S+ Q+ YI+++++ + M +       PA +G RL K+  P   EE + MR + Y+ AVG L ++   TR D++  V  +S+  SNP   HW AV+  ++Y+ GT  KKL     P +   +L GYSD+DW GD D+RRST+GY F L  +A       I+ N + QPTVALSS EAEYMA
Sbjct:   40 MKDLGPATHCLGIRIKRNRREGKLSLDQQAYIEEIVRRFGMENAYSIAT-PADSGVRLEKSMAPKTEEEEMEMRNVPYKEAVGCLSFVAQTTRPDIAFAVNAVSQFSSNPGKPHWEAVKRIIRYLKGTATKKLEYSRNPTD---ELKGYSDADWGGDPDSRRSTSGYVFTLQGAA-------IAWNVKKQPTVALSSCEAEYMA 232          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A8J4FPT0_9CHLO (Uncharacterized protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FPT0_9CHLO)

HSP 1 Score: 139 bits (349), Expect = 7.310e-37
Identity = 87/203 (42.86%), Postives = 118/203 (58.13%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDRS-VSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            ++DLG  K  LGMEI+ G+   V +SQ++YI+++L+ + +      +  P P G ++     P    E+  +   +YR  +G L YL M TR D++  +  L+R M  PS TH G     ++Y++GTK   L  G     G LKL GYSDSDWAGD  TRRSTTGY F+LG +A       IS NS+LQ TVA SS EAEY A
Sbjct:    1 IRDLGEAKVFLGMEISRGENGEVKLSQQRYIEELLQRHQLADAKP-RSTPLPPGSKV----LPAGDGETELVDSTEYRTLIGELNYLAMSTRPDIAQAMSVLARFMGKPSKTHMGLALGVLRYLAGTKELGLRFGG---AGELKLEGYSDSDWAGDPATRRSTTGYVFLLGGAA-------ISWNSQLQRTVAASSVEAEYQA 188          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: UPI001372DC10 (Ty1/Copia family RNAse HI domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001372DC10)

HSP 1 Score: 139 bits (349), Expect = 1.710e-36
Identity = 89/204 (43.63%), Postives = 116/204 (56.86%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEIT--FGDRSVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            M D+G LKY LGMEI        VS+ Q K+  D+L+ + M      K  P   G +LTKA      +    M  + YR+AVG L+YL + TR DL+  V  LS+  ++P PTHW A++   +Y+ GTK   L    F       L GYSD+DWAGD ++RRST+GYAF++         G IS  S+ Q TVALSSTEAEYMA
Sbjct:   10 MTDMGQLKYFLGMEIEQDVATGKVSVRQTKFAKDILEKFKMDESNPVKT-PQDPGLKLTKAMCEGGCKHDETMANVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIRGTKTHGL---VFQASSEDGLQGYSDADWAGDIESRRSTSGYAFMMN-------GGCISWRSKKQRTVALSSTEAEYMA 202          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A182GKP4_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GKP4_AEDAL)

HSP 1 Score: 139 bits (349), Expect = 1.910e-36
Identity = 81/202 (40.10%), Postives = 113/202 (55.94%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFGDRSVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYMA 202
            MKDLG  + +LGM I+    +V++ Q++YI+++L+ ++M  C      PA   QRL KA  P   +E   M  + YR  VG L +L   TR D++  V  +S    NP   HW A +  ++Y+ GTK+  L    F  E      G+SD+DW  D D+RRS TGY F  G        G++S +SR QPTVALS+ EAEYMA
Sbjct:   40 MKDLGEARQVLGMRISRTGDTVALDQQRYIEELLRKFNMVDCNP-TATPAEVNQRLVKAMSPKTQQEKERMHSVPYRELVGGLQFLAQCTRPDIAYAVNAVSSFCGNPGEAHWTAAKRILRYLQGTKSLGL---VFRKESDAAFEGFSDADWGNDPDSRRSVTGYLFQFG-------GGSVSWSSRKQPTVALSTMEAEYMA 230          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A0K8SE75_LYGHE (Uncharacterized protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8SE75_LYGHE)

HSP 1 Score: 137 bits (346), Expect = 2.350e-36
Identity = 80/203 (39.41%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEITFG--DRSVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYM 201
            M DLG  + +LG E++    ++ + I+Q+KY++++L  ++M  C   K  P+  G RL K+P     E   +MR + Y+ AVG LL+ + V+R D+++ V  +SR  SNP+P HW AV+  ++Y+ GT + +L    +  + P  ++G+ D+DWA D + RRSTTGY F+         SG IS  ++ QPTVALS+TEAEYM
Sbjct:    1 MVDLGEARNVLGFELSRNREEKKLWITQEKYLNEILGKFNMGSCNPAKT-PSSPGDRLKKSPHEQIEE---SMRNVPYQEAVGSLLFASQVSRPDIAHAVSSVSRFNSNPAPEHWTAVKRILRYIKGTTSMRLE---YDGKKPSPILGFCDADWANDLEDRRSTTGYVFLK--------SGPISWATKRQPTVALSTTEAEYM 188          
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Match: A0A6A4Z3J3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z3J3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.460e-36
Identity = 86/204 (42.16%), Postives = 115/204 (56.37%), Query Frame = 0
Query:    1 MKDLGVLKYLLGMEI---TFGDRSVSISQKKYIDDMLKIYDMHHCTHFKELPAPAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRELSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDSDWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEYM 201
            M DLG L+Y LG+++   T G  SV I Q+K++  +L  + M HC   K  P   GQ+L+K   P+  EE L M  + YR AVG L+YL + TR D +  V   S+ +  P   HW AV+   +Y+ GT+   +H           + GYSD+DWAGD DTR ST+GY F+L        +G +S  S  Q TVALSSTEAEYM
Sbjct:   33 MSDLGSLQYCLGIQVERSTSG--SVFIHQQKFLQSVLVKFRMEHCKPVKT-PQEPGQKLSKNMSPVTEEEHLDMESVPYRSAVGCLMYLMVATRPDNATAVGAASQFLERPGRQHWNAVKRIFQYLQGTQDFGIHYERVE----RSVCGYSDADWAGDVDTRHSTSGYCFLLN-------NGIVSWKSHKQRTVALSSTEAEYM 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16949.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182H216_AEDAL3.350e-4043.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9X648_LYGHE5.950e-3941.18Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D6YB57_9STRA1.260e-3744.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1W7R6K6_AEDAL2.430e-3743.14Putative retrovirus-related pol polyprotein from t... [more]
A0A182GR78_AEDAL4.990e-3741.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J4FPT0_9CHLO7.310e-3742.86Uncharacterized protein n=3 Tax=Volvox reticulifer... [more]
UPI001372DC101.710e-3643.63Ty1/Copia family RNAse HI domain-containing protei... [more]
A0A182GKP4_AEDAL1.910e-3640.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0K8SE75_LYGHE2.350e-3639.41Uncharacterized protein n=1 Tax=Lygus hesperus Tax... [more]
A0A6A4Z3J3_9STRA2.460e-3642.16Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 2..152
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..152
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 145..202
e-value: 7.9375E-26
score: 95.2277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16949contigP-wetherbeei_contig16949:867..1472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16949.2.1mRNA_P-wetherbeei_contig16949.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16949 315..1472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16949.2.1 ID=prot_P-wetherbeei_contig16949.2.1|Name=mRNA_P-wetherbeei_contig16949.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
MKDLGVLKYLLGMEITFGDRSVSISQKKYIDDMLKIYDMHHCTHFKELPA
PAGQRLTKAPFPLPPEESLAMREIKYRHAVGHLLYLTMVTRFDLSNVVRE
LSRHMSNPSPTHWGAVRWCMKYVSGTKAKKLHLGPFPCEGPLKLIGYSDS
DWAGDTDTRRSTTGYAFVLGTSADQICSGAISVNSRLQPTVALSSTEAEY
MA
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