prot_P-wetherbeei_contig1694.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1694.2.1
Unique Name	prot_P-wetherbeei_contig1694.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	196

Homology

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A7S3XQ96_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ96_HETAK)

HSP 1 Score: 126 bits (317), Expect = 4.820e-34
Identity = 63/92 (68.48%), Postives = 75/92 (81.52%), Query Frame = 0

Query:   77 PAESV---EENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            PAE V   +E SVYVGQVDY+A+PEELQ +FQ CGTINRVTILCDK TGRPKGYAY+EF +K +V+ A+L++D+ FKGRQLKVT    NL G
Sbjct:   29 PAELVAGLDETSVYVGQVDYEASPEELQAHFQSCGTINRVTILCDKFTGRPKGYAYVEFLEKESVENALLLHDSLFKGRQLKVTPKRHNLPG 120

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A6G0XPI3_9STRA (RRM domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPI3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.220e-33
Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 0

Query:   81 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            ++ENS+Y+GQVDY++TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF +  AV+ A+L+NDTTF+GRQLKVT    N  G
Sbjct:   74 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 158

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A485KGA4_9STRA (Aste57867_5040 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGA4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.510e-33
Identity = 59/85 (69.41%), Postives = 71/85 (83.53%), Query Frame = 0

Query:   81 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            ++ENS+Y+GQVDY++TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF +  AV+ A+L+NDTTF+GRQLKVT    N  G
Sbjct:   77 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTAKRVNERG 161

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A024UT71_9STRA (RRM domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UT71_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.640e-33
Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0

Query:   81 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            ++ENS+Y+GQVDY++TPEELQ  FQ CGTINRVTILCDK TG PKGYAYIEF +  AV+ A+L+NDTTF+GRQLKVT    N  G
Sbjct:   75 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGMPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 159

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A3R6Z628_9STRA (RRM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z628_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.740e-33
Identity = 59/85 (69.41%), Postives = 70/85 (82.35%), Query Frame = 0

Query:   81 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            ++ENS+Y+GQVDY++TPEELQ  FQ CGTINRVTILCDK TG PKGYAYIEF +  AV+ A+L+NDTTF+GRQLKVT    N  G
Sbjct:  105 IDENSIYIGQVDYESTPEELQALFQSCGTINRVTILCDKFTGMPKGYAYIEFANHDAVESALLLNDTTFRGRQLKVTPKRVNERG 189

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A2D4C1U4_PYTIN (Polyadenylatebinding protein 2 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1U4_PYTIN)

HSP 1 Score: 126 bits (317), Expect = 7.030e-33
Identity = 59/86 (68.60%), Postives = 72/86 (83.72%), Query Frame = 0

Query:   80 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            +++ENSVYVGQVDY +TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF ++ AV+ A+L+NDT F+GRQ+KVT    N+ G
Sbjct:   99 ALDENSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFANRDAVESALLLNDTMFRGRQIKVTPKRQNIRG 184

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A067D344_SAPPC (RRM domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D344_SAPPC)

HSP 1 Score: 126 bits (316), Expect = 7.230e-33
Identity = 60/86 (69.77%), Postives = 70/86 (81.40%), Query Frame = 0

Query:   80 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            +++ENS+YVGQVDY+ATPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF    AV+ A L+NDT+F+GRQLKVT    N  G
Sbjct:   70 AMDENSIYVGQVDYEATPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESACLLNDTSFRGRQLKVTPKRVNERG 155

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: M4BK87_HYAAE (RRM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BK87_HYAAE)

HSP 1 Score: 126 bits (316), Expect = 8.700e-33
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 0

Query:   78 AESVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            A  VE+ S+Y+GQVDY +TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF  + AV+ A+L+NDT F+GRQLKVT    N+ G
Sbjct:   97 AAQVEDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLKVTPKRMNVRG 184

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: H3G6Y3_PHYRM (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G6Y3_PHYRM)

HSP 1 Score: 123 bits (309), Expect = 1.210e-32
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0

Query:   80 SVEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            S+++ S+Y+GQVDY +TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF  + AV+ A+L+NDT F+GRQLKVT    N+ G
Sbjct:   53 SMDDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLKVTPKRQNVRG 138

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BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Match: A0A6A3S9W0_9STRA (RRM domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S9W0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.520e-32
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 0

Query:   81 VEENSVYVGQVDYDATPEELQEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFKGRQLKVTQTLFNLSG 165
            +++ S+Y+GQVDY +TPEELQ  FQ CGTINRVTILCDK TG+PKGYAYIEF  + AV+ A+L+NDTTF+GRQLKVT    N+ G
Sbjct:   91 MDDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKYTGQPKGYAYIEFASRDAVESALLLNDTTFRGRQLKVTPKRLNMRG 175

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1694.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3XQ96_HETAK	4.820e-34	68.48	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A6G0XPI3_9STRA	1.220e-33	69.41	RRM domain-containing protein n=1 Tax=Aphanomyces ...	[more]
A0A485KGA4_9STRA	1.510e-33	69.41	Aste57867_5040 protein n=1 Tax=Aphanomyces stellat...	[more]
A0A024UT71_9STRA	2.640e-33	69.41	RRM domain-containing protein n=4 Tax=Aphanomyces ...	[more]
A0A3R6Z628_9STRA	5.740e-33	69.41	RRM domain-containing protein n=1 Tax=Aphanomyces ...	[more]
A0A2D4C1U4_PYTIN	7.030e-33	68.60	Polyadenylatebinding protein 2 putative n=1 Tax=Py...	[more]
A0A067D344_SAPPC	7.230e-33	69.77	RRM domain-containing protein n=4 Tax=Saprolegniac...	[more]
M4BK87_HYAAE	8.700e-33	67.05	RRM domain-containing protein n=1 Tax=Hyaloperonos...	[more]
H3G6Y3_PHYRM	1.210e-32	66.28	RRM domain-containing protein n=2 Tax=Phytophthora...	[more]
A0A6A3S9W0_9STRA	1.520e-32	67.06	RRM domain-containing protein n=3 Tax=Phytophthora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 85..157 e-value: 2.4E-22 score: 90.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 86..155 e-value: 7.2E-17 score: 61.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 84..161 score: 16.022581
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 17..160 e-value: 2.2E-26 score: 94.7
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 22..164
None	No IPR available	PANTHER	PTHR23236:SF12	EUKARYOTIC INITIATION FACTOR 4B-RELATED	coord: 22..164
None	No IPR available	CDD	cd12306	RRM_II_PABPs	coord: 85..157 e-value: 7.00712E-47 score: 146.667
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 77..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1694	contig	P-wetherbeei_contig1694:4825..6559 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1694.2.1	mRNA_P-wetherbeei_contig1694.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1694 4587..6698 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1694.2.1 ID=prot_P-wetherbeei_contig1694.2.1|Name=mRNA_P-wetherbeei_contig1694.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
MSGVDGTAAKDGVVSEDVMKGLASIEEEEDAAAKLMEAELHMATNGAPAD
GAAATTGSAAASTAAAAAAAAAAAGAPAESVEENSVYVGQVDYDATPEEL
QEYFQGCGTINRVTILCDKMTGRPKGYAYIEFQDKGAVDLAILMNDTTFK
GRQLKVTQTLFNLSGSLFRLSFSYFSSMALSLGVVSCCCGSMVML*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf