prot_P-wetherbeei_contig16923.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16923.2.1
Unique Nameprot_P-wetherbeei_contig16923.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length184
Homology
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A7Y4X3A1_9DELT (Nuclear transport factor 2 family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X3A1_9DELT)

HSP 1 Score: 169 bits (428), Expect = 3.400e-50
Identity = 92/185 (49.73%), Postives = 118/185 (63.78%), Query Frame = 0
Query:    3 TRRSAKA---AAAPVKQATRHAPARAPVAXXRSATKGSPMS---DYEGVRALLSRYCVLIDHGKLVELSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVVNGNTATASAYFDSDFVEASGDVRILAGRYDDVLVKDRGRWLFKERTITVCYHYSPDKAKEGM 181
            TR  AKA   AA PVK   R        A  R  T+ SP S     EGVR +LSRYC  +D   L E+  L+H  A FSVSFD  + H+GR  I AWY+RFF + P + S+ RHKL+EP + ++G+TATA  YFDSD V+  G + ++AGRYDD LV++ G+W FK+R ITV YHYSP  ++EGM
Sbjct:    8 TRTQAKAGRGAAKPVKTTVRPLQRARQAAPGR--TRSSPPSLSESVEGVRQVLSRYCFALDTLALQEVGALFHRDATFSVSFDREQQHTGRETIKAWYARFFQQRPGQYSHMRHKLYEPRVTIHGDTATAVTYFDSDAVDQDGKIIVIAGRYDDTLVRESGQWFFKDRRITVLYHYSPGTSREGM 190          
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A7C3MLR0_9BACT (Nuclear transport factor 2 family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C3MLR0_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 1.020e-18
Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 0
Query:   41 DYEGVRALLSRYCVLIDHGKLVELSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVVNGNTATASAYFDSDFV-EASGDVRILAGRYDDVLVKDRGRWLFKERTITVCY 170
            D   ++ +L RYC  +D G   +++ L+H  A     +       GRAAI  W++ +       V Y RH +  P I V+GN AT+  Y  +D V +ASG    ++G Y D LVK+ GRW FKER I V Y
Sbjct:    4 DIVAIQQVLYRYCFAVDKGTADDVAALFHEDATLMPIYSGEPPARGRAAIRNWFTVYHRNQRASVDYLRHCVTNPVIEVSGNEATSQCYLIADAVNKASGKPYSVSGYYLDKLVKEGGRWYFKERQIHVNY 134          
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A523LSI1_9GAMM (Nuclear transport factor 2 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LSI1_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 6.280e-8
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 0
Query:   34 TKGSPMSDYEGVRALLSRYCVLIDHGKLVE-LSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVV--NGNTATASAYFDSDFVEASGDVRI-LAGRYDDVLVKDRGRWLFKERTI 166
            T+ S + D E +R L + YC L D G   + L +L+ + A +      +    GR AI     RFF   P  +S+  H +    I +  +GNTAT   Y        S    + LAGRYDD LV+++ RWLF++ T+
Sbjct:   14 TRISRLEDVERIRRLKAHYCDLCDEGYDADALIDLFTADAVWDGG--DLGRFDGRDAI----HRFFSNMPNVMSFAIHHITNAAIRIEEDGNTATGRWYLLQTATTRSDSQAVWLAGRYDDELVREQDRWLFRQVTL 144          
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A4R7VJC1_9PSED (SnoaL-like protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A4R7VJC1_9PSED)

HSP 1 Score: 52.0 bits (123), Expect = 4.300e-5
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0
Query:   39 MSDYEGVRALLSRYCVLIDHGKLVE-LSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVVNGNTATASAYFD--------SDFVEASGDVRILAGRYDDVLVKDRGRWLFKERT 165
            + D E ++ +  RY   +D G   E ++ L+  + ++ +     +   GRAAI              +S+ +H +F P I +N     A A F+        SD   +SG+  ILAG Y+D LVK RG+W FK  T
Sbjct:   15 LEDVEKIKEIKYRYACHLDDGFDAESIANLFTEEGEWIIKGVGGEVR-GRAAIKLHCENL----KSNISWSQHNIFAPRIELNVEGDKAVARFNLMCLLTMNSDANGSSGEAYILAGHYEDHLVKIRGKWFFKAMT 145          
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A1E3SK78_9MYCO (SnoaL-like domain-containing protein n=2 Tax=Mycobacterium TaxID=1763 RepID=A0A1E3SK78_9MYCO)

HSP 1 Score: 50.8 bits (120), Expect = 6.350e-5
Identity = 45/146 (30.82%), Postives = 64/146 (43.84%), Query Frame = 0
Query:   39 MSDYEGV-RALLSRYCVLIDHGKLVELSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVVNGNTATASAYFDSDFVEASGDVRILAGRYDDVLVKDRGRWLFKERTIT-VCYHYSPDKAKEGMA 182
            MSD   V R LL+ Y + +D G      +L+ + A+F V   +   H G   +            R   +  H      I V GNTAT+ +     FV A GD ++    YDD LV+D GRWLF+ R    +  H   D  + G +
Sbjct:    1 MSDATAVIRGLLADYALALDAGDDDACVQLFTADAEFRVYGRTFTGHEGIGRMF-----------RMAPHGLHLTGVSRIDVQGNTATSRSQVL--FVRA-GDQQLRPALYDDELVQDGGRWLFRRRHCRFITTHGLSDSPEAGQS 132          
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Match: A0A5B2TCV6_9PROT (Nuclear transport factor 2 family protein n=1 Tax=Roseomonas oryzae TaxID=1608942 RepID=A0A5B2TCV6_9PROT)

HSP 1 Score: 50.8 bits (120), Expect = 8.650e-5
Identity = 37/133 (27.82%), Postives = 63/133 (47.37%), Query Frame = 0
Query:   39 MSDYEGVRALLSRYCVLIDHGKLVELSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYEPPRKVSYPRHKLFEPYIVVNGNTATASAYFDSDFVEASGDV-RILAGRYDDVLVKDRGRWLFKERTITVCY 170
            + D   +  L +RYC L+D        EL+     F    ++V+ H   AA++ ++S+     P+      H      + ++G+TA      +  ++ A+  V  + AG YDDV+V+  GRW F+ R IT  Y
Sbjct:   11 IEDELAIGQLRARYCHLLDDRDWPAFVELFTPDGVFQ-GLEAVRGH---AALMEFFSQ---RVPKLAEDFWHFCTNGTVEIDGDTARGRITLE--YLSATNGVSHVSAGHYDDVMVRQGGRWRFQSRVITFYY 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16923.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A7Y4X3A1_9DELT3.400e-5049.73Nuclear transport factor 2 family protein n=1 Tax=... [more]
A0A7C3MLR0_9BACT1.020e-1837.40Nuclear transport factor 2 family protein n=1 Tax=... [more]
A0A523LSI1_9GAMM6.280e-833.58Nuclear transport factor 2 family protein n=1 Tax=... [more]
A0A4R7VJC1_9PSED4.300e-530.15SnoaL-like protein n=2 Tax=Pseudomonas TaxID=286 R... [more]
A0A1E3SK78_9MYCO6.350e-530.82SnoaL-like domain-containing protein n=2 Tax=Mycob... [more]
A0A5B2TCV6_9PROT8.650e-527.82Nuclear transport factor 2 family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037401SnoaL-like domainPFAMPF13577SnoaL_4coord: 40..165
e-value: 1.2E-18
score: 67.3
NoneNo IPR availableGENE3D3.10.450.50coord: 35..176
e-value: 7.8E-26
score: 92.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..33
NoneNo IPR availableCDDcd00531NTF2_likecoord: 45..166
e-value: 7.12024E-5
score: 38.65
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 38..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16923contigP-wetherbeei_contig16923:381..932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16923.2.1mRNA_P-wetherbeei_contig16923.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16923 381..932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16923.2.1 ID=prot_P-wetherbeei_contig16923.2.1|Name=mRNA_P-wetherbeei_contig16923.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp
MATRRSAKAAAAPVKQATRHAPARAPVAPARSATKGSPMSDYEGVRALLS
RYCVLIDHGKLVELSELYHSKAKFSVSFDSVKSHSGRAAILAWYSRFFYE
PPRKVSYPRHKLFEPYIVVNGNTATASAYFDSDFVEASGDVRILAGRYDD
VLVKDRGRWLFKERTITVCYHYSPDKAKEGMAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037401SnoaL-like
IPR032710NTF2-like_dom_sf