prot_P-wetherbeei_contig1692.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1692.4.1
Unique Nameprot_P-wetherbeei_contig1692.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length216
Homology
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: D7G6E6_ECTSI (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E6_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 4.560e-76
Identity = 129/209 (61.72%), Postives = 159/209 (76.08%), Query Frame = 0
Query:    4 DVEGCFGILFAVLDRVGDVEEA-PVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEVGEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHK 211
            DVEGCFGILF++L +  + + A P L+ EIA  +L+ VDD+APLRLKLVT LYNMLP R   QLEVLL V+ YA  AKL++MLS FFAGV+DW+ GWELS  D+RR+YLL++D L   G+A +SQ+FL+KYLAT+ GA    LA V+ AA RG  GAV++PIVSF EQHNLLGM AV QLK D KY  +++LL IFSVEKL  Y AFH+
Sbjct:   70 DVEGCFGILFSLLFKTDNPKAAVPALSMEIATKVLEKVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYAKEAKLVAMLSSFFAGVDDWIKGWELSVADQRRLYLLISDTLGSEGKAVESQKFLMKYLATYDGATTAELAEVKAAAVRGCIGAVKSPIVSFTEQHNLLGMAAVTQLKADPKYSAVHELLHIFSVEKLGEYMAFHE 278          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A835Z3J7_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J7_9STRA)

HSP 1 Score: 202 bits (515), Expect = 5.830e-60
Identity = 114/220 (51.82%), Postives = 153/220 (69.55%), Query Frame = 0
Query:    2 KKDVEGCFGILFAVLDRVGD-VEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEVGEAEQSQRFLIKYLATFS----GAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRSIL 216
            ++ +EGCF +LF +L R+ D  +  PVL  E+ AALLD  +DKA LRL+L T LYNMLP++   Q EVLL+++ YA+   LL+ML+ FFA +   LA W+LS +D+RR++LL+ADVL++  +A  SQ FL+KYL TF     G+   A   VR AAARGA GAV+APIVSF+E HNLLGM AV++L+ D +Y  +Y+LL IF  EKL+ Y AF K    L
Sbjct:   68 EETIEGCFAVLFHLLHRLPDPAKNMPVLVPEVTAALLDS-EDKAGLRLRLATSLYNMLPAKTSVQFEVLLAIIKYAASTGLLAMLNSFFASMESMLAAWQLSLKDQRRLFLLVADVLSKASDAAGSQVFLMKYLVTFDNDAEGSKTSAKE-VRAAAARGAVGAVKAPIVSFMEHHNLLGMSAVQELRNDPEYAQVYELLRIFGEEKLETYLAFAKANQAL 285          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A7S2CTT4_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTT4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 6.650e-36
Identity = 87/213 (40.85%), Postives = 131/213 (61.50%), Query Frame = 0
Query:    4 DVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPS-----RGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEVGEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHK 211
            D EGCF ILF  L    D      L   I +AL    + KA LRLK++  LYN L S      G  +++VLL+++ YA + +  +ML G+F  +++ +  W LS  D+R +++ ++  L      +++ +FLI+YLATF    +DA+   +  AA+GA GA+R PI+ F+E+HNLLGM A++QL+ DA+YG LY+LL IFSV KL  Y  F++
Sbjct:   56 DAEGCFQILFFELQEEKDTAVMLPLVGLITSALTGS-ESKAKLRLKILANLYNALCSDDKVPEGQIRVDVLLAIIKYAGKTQQSAMLHGYFDLLDELMVKWNLSLSDKRTLFVEVSKALEAEELNDKAHQFLIRYLATFDDT-SDAVDTSK--AAQGAIGAIRKPILCFMERHNLLGMTAMQQLENDAEYGKLYELLRIFSVGKLREYLNFYE 264          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A7S2UX52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX52_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.860e-29
Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 0
Query:   75 YASRAKLLSMLSGFFAGVN-DWLAGWELSAEDRRRIYLLMADVLAEVGEAEQSQRFLIKYLATFSG-APADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHK 211
            +A  +    +LS FF     +W+  ++L   D+R +YLLMAD L +   + ++Q+FL+KYLAT+   A A AL+AV+  AARGA GA+R PIVSF E HN+L + AV+QL+ D KY  LY LL +FS EKL AY  F K
Sbjct:    1 FAMASSQNGLLSSFFIKQGQEWVELFDLETGDQRTLYLLMADSLVQSQHSHEAQKFLLKYLATYEDEADAKALSAVKEHAARGAVGAIRFPIVSFTEGHNVLALQAVKQLEGDKKYKNLYNLLRVFSTEKLQAYLDFCK 139          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A2C9WCR1_MANES (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9WCR1_MANES)

HSP 1 Score: 115 bits (289), Expect = 6.520e-27
Identity = 78/217 (35.94%), Postives = 123/217 (56.68%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAE-VGEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRSIL 216
            ++KD+E  F ++  ++ + G  +EA  +A  I   ++    DK  LRLK++  LYN+L     ++  V +  +  A   K++  +   F  ++ +L  W L  +D+R ++L +++VL E     + S +FL KYLATFSG  A A+A  +  A R     V+AP +    Q +LLGM AV QL++DAKY  +YQLL+IF  ++LDAY  FH   S L
Sbjct:   74 SEKDLECIFTVICDLVSKSGSPDEALEMAKLICGKIILQPTDKPALRLKILFNLYNLLED-AYSRFYVYMRALNLAVSGKVMEHIIPSFKTIDSFLKEWNLDVKDQRDLFLGISNVLRENKSSGKDSFKFLTKYLATFSGEDAYAMAEAKEEAVRTIIVFVKAPDIF---QCDLLGMPAVEQLEKDAKYALVYQLLNIFLTQRLDAYLEFHAANSAL 286          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: UPI001C348ED2 (Uncharacterized protein n=7 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C348ED2)

HSP 1 Score: 109 bits (272), Expect = 2.130e-24
Identity = 71/211 (33.65%), Postives = 120/211 (56.87%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEVGE-AEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFH 210
            ++KD+E  F ++  ++ +    +E   +A  I+  ++   +DK  LRLK++  LYN+L +    Q  V +  +  A   K+   +   F  ++ +L  W +   D+R ++L+++++L E    A++S +FL+KYLATFSG  A  ++  +  A R     V+AP +    Q +LL M AV QL++DAKY  +YQLL IF  ++LDAY  FH
Sbjct:   72 SEKDLECIFTVICNLVTKSESSDEKIEMAKVISGKIIQQPNDKPALRLKILFNLYNLLENPH-GQFHVYMKALTLAFNGKVTEHIIPSFKKMDSFLQEWNIGISDQRELFLIISNILKEHKSLAKESFKFLVKYLATFSGEDAYTMSEAKEEAVRAIVEFVKAPDMF---QCDLLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLEFH 278          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A067K648_JATCU (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K648_JATCU)

HSP 1 Score: 108 bits (269), Expect = 4.510e-24
Identity = 76/217 (35.02%), Postives = 119/217 (54.84%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEV-GEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRSIL 216
            ++K++E  F ++  ++ +    +EA  +A  +   ++    DK  LRLK++  LYN+L +   ++  V L  +  A   K+   +   F  ++ +L  W L  +D R ++L +A+VL E    A+ S +FL KYLATFSG  A A+A  +  A R     V+AP +    Q +LL M AV QL++DAKY  +YQLL IF  ++LDAY  F    S L
Sbjct:   74 SEKELECIFTVICNLVTKSESPDEALEMAKLVCGKIIQQPTDKPALRLKILFNLYNLLENTY-SRFYVYLKALNLAVSGKVTEHVIPSFKKIDSFLKEWNLEVKDERELFLSIANVLRESKSSAKDSFKFLTKYLATFSGEDAYAMAEAKEEAVRTIIEFVKAPDMF---QCDLLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLEFQAANSAL 286          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A2I4EC20_JUGRE (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4EC20_JUGRE)

HSP 1 Score: 107 bits (268), Expect = 6.110e-24
Identity = 72/217 (33.18%), Postives = 120/217 (55.30%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEVGE-AEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRSIL 216
            ++KD+E  + ++  ++ +    +E   +A  I+  ++   +DK  LRLK++  LYN+L +    Q  V +  +  A   K+   +   F  ++ +L  W +   D+R ++L +++VL E    ++ S +FL+KYLATFSG  A  ++  +  A R     V+AP +    Q +LL M AV QL++DAKY  +YQLL IF  ++LDAY  FH   S L
Sbjct:   72 SEKDLECIYTVICNLVTKSESSDEEIEMAKVISGKIIQQPNDKPALRLKILFNLYNLLENPH-GQFHVYMKALTLAFNGKVTEHIVPSFKKMDSFLQEWNIGISDQRELFLTISNVLKEHKSLSKDSFKFLVKYLATFSGEDAYTMSEAKEEAVRAIVEFVKAPDMF---QCDLLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYLEFHAANSTL 284          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: A0A022R302_ERYGU (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R302_ERYGU)

HSP 1 Score: 106 bits (264), Expect = 2.240e-23
Identity = 72/217 (33.18%), Postives = 119/217 (54.84%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEV-GEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRSIL 216
            ++KD+E  + ++  ++ +   +++   +A  IA  +     +K  LRLK++  LYN+L +   +Q  V +  +  A   K+   +   F  ++++L  W L   DRR ++L +A+VL +    A+ S  FL+KYL TFSG  A +LA  +  A       ++AP +    Q +LL M A+ QL++D KY  +YQLL IF  ++LDAY AFH   S L
Sbjct:   72 SEKDIECIYTVICNLVKKPESLDQVHEMAELIATKVTQQPSEKPALRLKILFNLYNLLENPY-SQFFVYMKALNLAINGKVTEHIVPSFKKIDNFLREWNLGVNDRRDLFLKVANVLKDSKSSAKDSFNFLVKYLDTFSGDDALSLAEAKEEAVHTVIDFIKAPDMF---QGDLLDMPAIAQLEKDTKYELVYQLLKIFLTQRLDAYMAFHSSNSDL 284          
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Match: UPI001C27E4F6 (eukaryotic translation initiation factor 3 subunit M-like isoform X3 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27E4F6)

HSP 1 Score: 100 bits (249), Expect = 1.210e-21
Identity = 66/215 (30.70%), Postives = 122/215 (56.74%), Query Frame = 0
Query:    1 TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKLVTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWELSAEDRRRIYLLMADVLAEV-GEAEQSQRFLIKYLATFSGAPADALAAVRPAAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSVEKLDAYRAFHKVRS 214
            ++KD+E  + ++  ++ +   +++   +A  IA  +    ++K  LRLK++  LYN+L +   +Q  V +  +  A   K+   +   F  ++D+L+ W L  +D+R ++L +A++L +    A++S  +L+KYL TFSG  A ALA  +  A       V++P +    Q +LL + A+ QL++D+ Y P+YQ+L+IF  ++LDAY  F    S
Sbjct:   72 SEKDLECIYTVICHLVKKPESLDQVHEIAELIATKVTQQPNEKPGLRLKILFNLYNLLENPY-SQFFVYMKALNLAVSGKVTEHIVPSFKKMDDFLSEWNLGTKDKRDLFLTVANILKDSKSSAKESFDYLVKYLETFSGDDALALAEAKEEAVLAVVEFVKSPDMF---QGDLLDIPAIAQLEKDSAYAPVYQILNIFLTQRLDAYLDFQSSNS 282          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1692.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E6_ECTSI4.560e-7661.72Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z3J7_9STRA5.830e-6051.82Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2CTT4_9STRA6.650e-3640.85Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2UX52_9STRA8.860e-2948.20Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2C9WCR1_MANES6.520e-2735.94Eukaryotic translation initiation factor 3 subunit... [more]
UPI001C348ED22.130e-2433.65Uncharacterized protein n=7 Tax=Carya illinoinensi... [more]
A0A067K648_JATCU4.510e-2435.02Eukaryotic translation initiation factor 3 subunit... [more]
A0A2I4EC20_JUGRE6.110e-2433.18Eukaryotic translation initiation factor 3 subunit... [more]
A0A022R302_ERYGU2.240e-2333.18Eukaryotic translation initiation factor 3 subunit... [more]
UPI001C27E4F61.210e-2130.70eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 2..211
IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7PANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 2..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1692contigP-wetherbeei_contig1692:5162..6531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1692.4.1mRNA_P-wetherbeei_contig1692.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1692 5162..6531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1692.4.1 ID=prot_P-wetherbeei_contig1692.4.1|Name=mRNA_P-wetherbeei_contig1692.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
TKKDVEGCFGILFAVLDRVGDVEEAPVLASEIAAALLDIVDDKAPLRLKL
VTYLYNMLPSRGPAQLEVLLSVVGYASRAKLLSMLSGFFAGVNDWLAGWE
LSAEDRRRIYLLMADVLAEVGEAEQSQRFLIKYLATFSGAPADALAAVRP
AAARGAAGAVRAPIVSFVEQHNLLGMDAVRQLKEDAKYGPLYQLLSIFSV
EKLDAYRAFHKVRSIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045237COPS7/eIF3m