prot_P-wetherbeei_contig16880.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16880.2.1
Unique Nameprot_P-wetherbeei_contig16880.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length275
Homology
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: UPI00159653DD (FCD domain-containing protein n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=UPI00159653DD)

HSP 1 Score: 489 bits (1258), Expect = 7.790e-174
Identity = 257/264 (97.35%), Postives = 263/264 (99.62%), Query Frame = 0
Query:   11 MMSATCMLAEVASESSEPLFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPIETHHLE 274
            MMSATCMLAEVASESSEPLF+RVKVTPAYQMI+GVVEKQILSGKL+PGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANV+RLK+HHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWT KHLIDFQRGYTLA+IPMNTPIETHHLE
Sbjct:    1 MMSATCMLAEVASESSEPLFDRVKVTPAYQMITGVVEKQILSGKLSPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVDRLKAHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTRKHLIDFQRGYTLARIPMNTPIETHHLE 264          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A7Y0BXA4_9BURK (FadR family transcriptional regulator n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0BXA4_9BURK)

HSP 1 Score: 339 bits (870), Expect = 8.250e-115
Identity = 176/242 (72.73%), Postives = 207/242 (85.54%), Query Frame = 0
Query:   30 FERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPIETH 271
            FERVKV PAY+ +  VVE++I+ G+L PGT LPTE++LA+QFGVNRSTVREAIRQLEQEGLVERR SKRL VTMPG+YDAAPRAAR+L+L QVTF ELWQVA+VLEP+AARLAA +A  AD+++L   V+RL +H K   S+Q HA++DIEFHA VAR SGNRVLMLAREPINLLYRPSL RLQ  LPQ++RRNL+AHKRI +AIAA DA QA EWT KHLIDFQRGY LA+IPMNTP++ +
Sbjct:   17 FERVKVMPAYKAVCTVVEQRIVRGELKPGTQLPTELDLAQQFGVNRSTVREAIRQLEQEGLVERRGSKRLHVTMPGVYDAAPRAARALLLHQVTFEELWQVALVLEPQAARLAAAAAAPADLQELQEAVDRLCAHDKCEESLQSHAELDIEFHALVARISGNRVLMLAREPINLLYRPSLIRLQQALPQMKRRNLEAHKRIVRAIAAHDADQAYEWTRKHLIDFQRGYALARIPMNTPLQAY 258          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A147GRH4_9BURK (HTH gntR-type domain-containing protein n=2 Tax=Pseudacidovorax intermedius TaxID=433924 RepID=A0A147GRH4_9BURK)

HSP 1 Score: 274 bits (700), Expect = 4.690e-89
Identity = 144/253 (56.92%), Postives = 182/253 (71.94%), Query Frame = 0
Query:   21 VASESSEPLFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPIETHHL 273
            + + S    F+ +K+ P Y+ +S  +E++I+ G+L  G LLPTE+ELA+Q GVNRSTVREAIRQLEQEG + R+  +RL V +PG  D   R AR+LMLQQVTF ELWQVA+VLEP+AA LAA +  A  +  L     +L+  H  GG+ Q HA++D+ FHA VA AS NRVLM+AREPINLLYRP+L RLQ VLPQ + RN+ AH R+ +AIAAGD   A EW  KHL+DFQRGY LA IPM+T +E  HL
Sbjct:    3 IHANSDAIAFQPMKLVPGYRALSSAIEQRIVRGELQAGMLLPTELELAQQLGVNRSTVREAIRQLEQEGFLVRQGGRRLYVRLPGAEDVGARTARALMLQQVTFHELWQVAMVLEPQAAELAAAAIDAPGLTALRTLAAQLEQCHDEGGTAQRHAELDVAFHAQVAAASRNRVLMMAREPINLLYRPTLVRLQRVLPQTQSRNVQAHTRLIEAIAAGDGRGAAEWMRKHLVDFQRGYALAGIPMDTALEPDHL 255          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A0Q4Y1T2_9BURK (HTH gntR-type domain-containing protein n=2 Tax=Pseudorhodoferax sp. Leaf267 TaxID=1736316 RepID=A0A0Q4Y1T2_9BURK)

HSP 1 Score: 257 bits (656), Expect = 1.740e-82
Identity = 136/244 (55.74%), Postives = 181/244 (74.18%), Query Frame = 0
Query:   29 LFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGG-SMQEHA---QIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            +F+R+++ PAY+++S  +E+ IL G+L PG  LPTE  LAE+FGV+RSTVREAIRQ+EQEGLV+RR  +RL V +PG+Y+ APRAAR L+LQQ TFAELWQVAV LEP AA+LAA +A   D+++LAAN ER       G  S++++A   ++D+EFHA V RAS NR LMLAREPI+LLY P+L ++   LPQ + RNL AH+ I  A+   DA  A EWT KH++DFQ+G+ +  + M TPI
Sbjct:    1 MFQRLRLEPAYKVVSSEIERSILDGQLQPGMPLPTEQSLAERFGVHRSTVREAIRQIEQEGLVQRREGRRLFVALPGLYEMAPRAARLLLLQQTTFAELWQVAVTLEPLAAQLAALNAEPLDLQELAANTERTADLQAQGAESVEDNARLVELDVEFHALVGRASHNRALMLAREPISLLYNPTLLQIHLRLPQSKARNLAAHRAILDALQRRDAAAAAEWTRKHMVDFQKGFEMTGLDMQTPI 244          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A519F1C3_9BURK (FadR family transcriptional regulator n=3 Tax=Comamonadaceae TaxID=80864 RepID=A0A519F1C3_9BURK)

HSP 1 Score: 259 bits (662), Expect = 2.960e-82
Identity = 145/267 (54.31%), Postives = 186/267 (69.66%), Query Frame = 0
Query:    7 PTNSMMSATCMLAEVASESSEP-LFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGG-SMQEH---AQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            PT    ++    + V   + +P LF R+++ PAY+ +S  +E+ ILSGKL PG  LPTE  LAE+FGV+RSTVREAIRQ+EQEGLV+RR  +RL VT+PG+YD APRAAR L+LQQ TF ELW+VAV LEP AARLAA SA   DI++LA N E   +   NG  SM E+    ++D+EFHA V RAS NR LMLAREPI+LLY P + ++   LPQ + RNL AH+ I  A+  GDA  A EWT KH++DF++G+ +    M TPI
Sbjct:   62 PTAGSSASAARASGVPVTAPDPTLFRRLRLEPAYKAVSSEIERSILSGKLTPGMPLPTEQSLAERFGVHRSTVREAIRQVEQEGLVQRREGRRLFVTLPGLYDLAPRAARLLLLQQTTFQELWEVAVTLEPLAARLAAVSAEPGDIDELAHNTEVTAALQANGSASMDENMRLVELDVEFHALVGRASHNRALMLAREPISLLYNPIMLQIHLHLPQSKARNLAAHRAILDALKRGDAAAAGEWTRKHMVDFKKGFEMTGQDMRTPI 328          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: UPI001C2B860E (GntR family transcriptional regulator n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI001C2B860E)

HSP 1 Score: 253 bits (646), Expect = 1.060e-80
Identity = 136/255 (53.33%), Postives = 182/255 (71.37%), Query Frame = 0
Query:   25 SSEPLFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNG--GSMQEHAQ---------IDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            + + +F R+++ PAY+ +S  +E+ ILSG L PG  LPTE ELA+QFGVNRST+REAIRQ+EQEGLVERR  +RL V +PG+ D APRA R+L+LQQ TF ELWQVAVVLEP AA+LAA +A   D++ LAAN+ R+++  +    G  Q  AQ         +D++FHA VARA  NR LMLAREP++LLY  +L R+Q  LPQ+  RNL AH+ I  A+   DA +A+ W  KH++DFQRG+ LA++ M+ P+
Sbjct:   11 AGDQVFRRMRIAPAYKAVSAEIERIILSGALEPGAPLPTEQELAQQFGVNRSTLREAIRQVEQEGLVERREGRRLFVALPGLTDFAPRAMRALVLQQATFHELWQVAVVLEPLAAQLAAHAAREDDLQALAANLARMETLAQQAPEGDAQAQAQAQRESALIDLDVQFHALVARAGRNRALMLAREPVSLLYNATLARMQGQLPQMHARNLAAHRHILDALRQHDAERAEHWMRKHIVDFQRGFMLAQLDMHVPV 265          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A520H6E3_9BURK (FadR family transcriptional regulator n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520H6E3_9BURK)

HSP 1 Score: 253 bits (647), Expect = 1.130e-80
Identity = 136/245 (55.51%), Postives = 175/245 (71.43%), Query Frame = 0
Query:   29 LFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQ----IDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPIE 269
            +F+R+ +TPAY+++S  +E+ IL G+L PG  LPTE  LAE+FGV+RSTVREAIRQ+EQEGLV+RR+ +RL VT+PG+YD APRAAR L+LQQ TF ELWQVA  LEP AARLAA  ATAAD+E L  N    +     G +  E  Q    +D+EFHA V RAS NR LMLAREPI+LLY P+L R+   LPQ + RNLDAH+ I  A+   DA  A +WT +H+ DF+RG+ +  + M  P++
Sbjct:   28 MFDRLHLTPAYKVVSSEIERSILGGQLKPGMPLPTEQSLAERFGVHRSTVREAIRQVEQEGLVQRRAGRRLFVTLPGLYDMAPRAARLLLLQQTTFEELWQVAATLEPLAARLAALHATAADLEALEDNTTLTRQLQGRGAATVEAHQRLVELDVEFHALVGRASHNRALMLAREPISLLYNPTLLRIHLHLPQSKARNLDAHRAIIDALHRRDADAAADWTRRHMDDFRRGFRMTGLDMGAPVQ 272          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A0S9L7P3_9BURK (HTH gntR-type domain-containing protein n=4 Tax=Pseudorhodoferax TaxID=747294 RepID=A0A0S9L7P3_9BURK)

HSP 1 Score: 249 bits (637), Expect = 3.350e-79
Identity = 140/260 (53.85%), Postives = 179/260 (68.85%), Query Frame = 0
Query:   13 SATCMLAEVASESSEPLFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQ----IDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            SA   L E AS     +F R+++ PAY+ +S  +E+ ILSG+L PG  LPTE  LAE+FGV+RSTVREAIRQ+EQEGLV+RR  +RL V +PG+YD APR AR LMLQQ TFAELWQVAV LEP A++LAA+ A  AD+E+LA N E   +    G +  E  Q    +D+EFHA V RAS NR LMLAREPI+LLY P+L ++   LPQ + RNL AH+ I  A+   D   A EWT KH++DF++G+ +  + M  PI
Sbjct:   21 SAPARLREDAS-----MFSRLQLAPAYKQVSTEIERSILSGQLRPGMPLPTEQSLAERFGVHRSTVREAIRQVEQEGLVQRREGRRLFVALPGLYDLAPRTARLLMLQQTTFAELWQVAVTLEPLASQLAAEHAEPADLEELARNTEATAALQAQGTNTLEDDQRLVELDVEFHALVGRASRNRPLMLAREPISLLYNPTLLQIHQRLPQSKARNLAAHRGILDALQRRDGAAAAEWTRKHMVDFKKGFEMTGLDMAAPI 275          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A480AV84_9BURK (GntR family transcriptional regulator n=1 Tax=Aquabacterium pictum TaxID=2315236 RepID=A0A480AV84_9BURK)

HSP 1 Score: 246 bits (629), Expect = 2.000e-78
Identity = 132/246 (53.66%), Postives = 171/246 (69.51%), Query Frame = 0
Query:   23 SESSEPLFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            +++   +F+RV V PAY+ +S  +E+ IL G L PG  LPTE ELAE+FGV+RSTVREAIRQ+EQEGL++RR  +RL V +PG++D APRA R L+L Q TF ELW VA+ LEP AARLAA  AT  D+ QL AN++   +  +    + E   +D+EFHA V RAS NR LMLAREP+ LLY P+L ++   LPQ   RNL AH+    A+ A DA  A EWT KH++DFQRG+ +A + M TPI
Sbjct:    3 AQTGAEVFQRVVVEPAYKTVSAAIERAILDGALRPGAALPTEQELAERFGVHRSTVREAIRQVEQEGLLQRREGRRLFVCLPGVHDLAPRATRLLLLHQTTFQELWDVALTLEPLAARLAAAQATDDDLAQLQANIDASATETR----LPELVALDMEFHALVGRASHNRALMLAREPVGLLYNPTLQQIFQRLPQASARNLAAHRHTLDALRARDAEAAAEWTRKHMVDFQRGFAMAGLSMRTPI 244          
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Match: A0A1F4HJV3_9BURK (HTH gntR-type domain-containing protein n=1 Tax=Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 TaxID=1797561 RepID=A0A1F4HJV3_9BURK)

HSP 1 Score: 239 bits (611), Expect = 1.060e-75
Identity = 130/240 (54.17%), Postives = 168/240 (70.00%), Query Frame = 0
Query:   29 LFERVKVTPAYQMISGVVEKQILSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQVTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAADIEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREPINLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHLIDFQRGYTLAKIPMNTPI 268
            +F+RV V PAY+ +S  +E+ I+ G L PG  LPTE ELAE+FGV+RSTVREAIRQ+EQEGL++RR  +RL V +PG++D APRA R L+L Q TF ELW VA+ LEP AARLAAQ A+  ++  LAANV   ++  +    + +   +D+EFHA V  AS NR LMLAREP+ LLY P+L ++   LPQ   RNL AH     A+ A DA  A EWT KH++DFQRG+ LA + M+TPI
Sbjct:    9 VFQRVVVEPAYKAVSAAIERAIVDGALPPGAALPTEQELAERFGVHRSTVREAIRQVEQEGLLQRREGRRLFVCLPGVHDLAPRATRLLLLHQTTFQELWDVALTLEPLAARLAAQHASDDELALLAANVAATEAETR----LPQLVALDMEFHALVGSASHNRALMLAREPVGLLYNPTLLQIFQRLPQASARNLAAHHHTLAALRARDAEAAAEWTRKHMVDFQRGFALAGLDMSTPI 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16880.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00159653DD7.790e-17497.35FCD domain-containing protein n=2 Tax=unclassified... [more]
A0A7Y0BXA4_9BURK8.250e-11572.73FadR family transcriptional regulator n=1 Tax=Pola... [more]
A0A147GRH4_9BURK4.690e-8956.92HTH gntR-type domain-containing protein n=2 Tax=Ps... [more]
A0A0Q4Y1T2_9BURK1.740e-8255.74HTH gntR-type domain-containing protein n=2 Tax=Ps... [more]
A0A519F1C3_9BURK2.960e-8254.31FadR family transcriptional regulator n=3 Tax=Coma... [more]
UPI001C2B860E1.060e-8053.33GntR family transcriptional regulator n=2 Tax=Novi... [more]
A0A520H6E3_9BURK1.130e-8055.51FadR family transcriptional regulator n=1 Tax=Vari... [more]
A0A0S9L7P3_9BURK3.350e-7953.85HTH gntR-type domain-containing protein n=4 Tax=Ps... [more]
A0A480AV84_9BURK2.000e-7853.66GntR family transcriptional regulator n=1 Tax=Aqua... [more]
A0A1F4HJV3_9BURK1.060e-7554.17HTH gntR-type domain-containing protein n=1 Tax=Bu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000524Transcription regulator HTH, GntRPRINTSPR00035HTHGNTRcoord: 61..75
score: 47.47
coord: 75..91
score: 46.79
IPR000524Transcription regulator HTH, GntRSMARTSM00345gntr3coord: 38..101
e-value: 1.8E-15
score: 67.4
IPR000524Transcription regulator HTH, GntRPFAMPF00392GntRcoord: 39..97
e-value: 6.7E-20
score: 70.5
IPR000524Transcription regulator HTH, GntRPROSITEPS50949HTH_GNTRcoord: 36..104
score: 23.15757
IPR000524Transcription regulator HTH, GntRCDDcd07377WHTH_GntRcoord: 37..94
e-value: 5.06861E-22
score: 84.8064
IPR011711GntR, C-terminalSMARTSM00895FCD_2coord: 126..252
e-value: 7.8E-22
score: 88.5
IPR011711GntR, C-terminalPFAMPF07729FCDcoord: 126..250
e-value: 8.3E-22
score: 77.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 31..104
e-value: 8.4E-22
score: 78.5
IPR008920Transcription regulator FadR/GntR, C-terminalGENE3D1.20.120.530coord: 121..255
e-value: 1.6E-25
score: 91.8
IPR008920Transcription regulator FadR/GntR, C-terminalSUPERFAMILY48008GntR ligand-binding domain-likecoord: 125..255
NoneNo IPR availablePANTHERPTHR43537TRANSCRIPTIONAL REGULATOR, GNTR FAMILYcoord: 39..254
NoneNo IPR availablePANTHERPTHR43537:SF34PYRUVATE DEHYDROGENASE COMPLEX REPRESSORcoord: 39..254
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 32..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16880contigP-wetherbeei_contig16880:589..1413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16880.2.1mRNA_P-wetherbeei_contig16880.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16880 589..1413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16880.2.1 ID=prot_P-wetherbeei_contig16880.2.1|Name=mRNA_P-wetherbeei_contig16880.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp
MQQLVCPTNSMMSATCMLAEVASESSEPLFERVKVTPAYQMISGVVEKQI
LSGKLAPGTLLPTEVELAEQFGVNRSTVREAIRQLEQEGLVERRSSKRLQ
VTMPGIYDAAPRAARSLMLQQVTFAELWQVAVVLEPEAARLAAQSATAAD
IEQLAANVERLKSHHKNGGSMQEHAQIDIEFHATVARASGNRVLMLAREP
INLLYRPSLTRLQAVLPQLERRNLDAHKRIFKAIAAGDAGQAQEWTLKHL
IDFQRGYTLAKIPMNTPIETHHLE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000524Tscrpt_reg_HTH_GntR
IPR011711GntR_C
IPR036388WH-like_DNA-bd_sf
IPR008920TF_FadR/GntR_C
IPR036390WH_DNA-bd_sf