prot_P-wetherbeei_contig16852.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16852.1.1
Unique Nameprot_P-wetherbeei_contig16852.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length187
Homology
BLAST of mRNA_P-wetherbeei_contig16852.1.1 vs. uniprot
Match: A0A835Z0L6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0L6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.800e-17
Identity = 63/194 (32.47%), Postives = 95/194 (48.97%), Query Frame = 0
Query:   13 LQKGPGGPVRAIKARVRTIVSSKKVRLRELFGAFD--IHNNKKISQDCFLRALTVAGIIIPAL--GPS----------ALLAQRYRAVGSTGRDDVDYSRFCAQIEKRPTSGKTTDADAAXXXXXXX--------EFGPDKLTFSAADAGSLRVLLGRLRHMTQTSGLVLRATFRDFDRRNNGCISPEDFVRSL 184
            + KGP  PV+ +K R+R I + +++RL+++F A++   HN K +++  F RAL  AG+ +P    GP+          ALL +RY   G T  D V++ RF  QI+K  T  K  + D                  +G      SA + G L  LL  +  M  T G+   A FRDFD  N G ++P  F+R +
Sbjct:   38 MTKGPSSPVKPVKDRLRGICARRRLRLKDVFQAYETQFHNQKVVTKSQFKRALAQAGLTVPTHDGGPTSNGLLTTKDLALLCKRYEEPGRT--DLVNWGRFADQIDKAFTI-KHLEGDPLREVRVRPPEPEGGACRYGLQSEELSAEELGELEALLSSISRMVTTQGINASAAFRDFDTTNCGHVTPPRFLRQV 228          
BLAST of mRNA_P-wetherbeei_contig16852.1.1 vs. uniprot
Match: A0A7S2CG71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG71_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.430e-7
Identity = 45/172 (26.16%), Postives = 74/172 (43.02%), Query Frame = 0
Query:   27 RVRTIVSSKKVRLRELFGAFDIHNNKKISQDCFLRALT--VAGIIIPALGPSALLAQRYRAVGSTGRDDVDYSRFCAQ---------IEKRPTSGKTTDADAAXXXXXXXEFGPDKLTFSAADAGSLRVLLGRLRHMTQTSGLVLRATFRDFDRRNNGCISPEDFVRSLSHI 187
            ++R IV S+ VRL + F  FD    +KI    F RAL     G++ P         + Y AV       ++Y   C +         +E+ P                    G    + +  +   +  +L RL HM  TSG +++  F DFD+ ++GC++ ++F+RSL  I
Sbjct:   14 KLRGIVKSRNVRLDDFFKEFDRRKTRKIDACNFDRALNNGTQGLLTP---DEVETLKAYFAVPGDALL-INYMELCDEANSVSEIKGLERHPKKNVVLKMQGTGQS----RLGLANPSLTEEELSVVEDILDRLTHMVDTSGTIVKELFVDFDKNHDGCVTKDEFLRSLKTI 177          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16852.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z0L6_9STRA1.800e-1732.47EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2CG71_9STRA6.430e-726.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 30..187
e-value: 2.7E-10
score: 41.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..130
NoneNo IPR availablePANTHERPTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDcoord: 21..186
NoneNo IPR availablePANTHERPTHR20875:SF0GH12158Pcoord: 21..186
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 155..187
score: 11.165957
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 30..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16852contigP-wetherbeei_contig16852:332..1092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16852.1.1mRNA_P-wetherbeei_contig16852.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16852 230..1092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16852.1.1 ID=prot_P-wetherbeei_contig16852.1.1|Name=mRNA_P-wetherbeei_contig16852.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
MAQEDPEIRLEALQKGPGGPVRAIKARVRTIVSSKKVRLRELFGAFDIHN
NKKISQDCFLRALTVAGIIIPALGPSALLAQRYRAVGSTGRDDVDYSRFC
AQIEKRPTSGKTTDADAAPAPPPPPEFGPDKLTFSAADAGSLRVLLGRLR
HMTQTSGLVLRATFRDFDRRNNGCISPEDFVRSLSHI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair