prot_P-wetherbeei_contig16656.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16656.1.1
Unique Nameprot_P-wetherbeei_contig16656.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length271
Homology
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BLAST of mRNA_P-wetherbeei_contig16656.1.1 vs. uniprot
Match: A0A836SB17_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836SB17_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 7.880e-6
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0 
Query:  127 PSVFAMRFFPPLLLIYTLSLLPVGRIFSTWTLSALVLCSLWALESLAFGLLAYSAFVLLHCIG-NRILIAHCLRSLTVLFACVGLTHACVWAGYMLA-YGLPPDYVTYLQLVLFHL---------EGGAYWNLPIEPGIMVWALFGFTY 264
            PS +  RF  PLLLI  +  LP  ++FS WT+ A++LCS ++ E   +G+  Y  + ++ C+  N+    + L     L     L+   +++  +L  YG  P Y  YL+L++ H+              WN  I P  ++W  F   Y
Sbjct:    7 PSTYGARFLWPLLLILAILYLPRNKLFSLWTILAVLLCSFFSAELFVWGIATYLTYTVIFCLTHNKHQKFYDLPKNIFLVLMTFLSSHIIYSLIILGVYGSLPRYDIYLELIISHIFNQDLPHFNNSIVNWNETIRPHFILWGGFAAVY 155
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16656.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836SB17_9GAMM7.880e-628.86Uncharacterized protein n=1 Tax=Thiotrichaceae bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16656contigP-wetherbeei_contig16656:582..1394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16656.1.1mRNA_P-wetherbeei_contig16656.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16656 582..1394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16656.1.1 ID=prot_P-wetherbeei_contig16656.1.1|Name=mRNA_P-wetherbeei_contig16656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
GPIPDATRFIGIALVISLVDVYMMMDSASFAPYIAPAFLVAEGQRPMIDT
FSQYGPNFLIFALAFKVLPLSFFTMSAIVAVLNVLMYLTFLGIAVNISRN
KTFAFVIAICTILFIHSAHLYNINYTPSVFAMRFFPPLLLIYTLSLLPVG
RIFSTWTLSALVLCSLWALESLAFGLLAYSAFVLLHCIGNRILIAHCLRS
LTVLFACVGLTHACVWAGYMLAYGLPPDYVTYLQLVLFHLEGGAYWNLPI
EPGIMVWALFGFTYATMLALA
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