prot_P-wetherbeei_contig1648.3.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1648.3.2
Unique Nameprot_P-wetherbeei_contig1648.3.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length321
Homology
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.750e-43
Identity = 100/282 (35.46%), Postives = 152/282 (53.90%), Query Frame = 0
Query:   45 GRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAG--GXXXXXXXXXXXXXXXGFRQPQFGGSPQQQS---FNGXXXXXXXXXXGDGMMA---FTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 318
            GR ++EKQ+I+PLTI+ ++ ++ D PD K  VD  E+  V++VG I D+   STN+ + +EDGTG +D ++F + DES+ + ERR    +  +V V G ++ +  K       +H+   +IRP+EDTN++T H LE IY HL +T GPL    GGAA G  G               GF +   GG+ QQ +   FNG          G G M         Q +++ F       G+S+      L P+G+   ++R+ V  L+ EGH+Y+T D+ H+KST
Sbjct:   28 GRPSREKQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDESQLQTERRSRCREGVYVAVVGQIKRWQDK-------LHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGFARQ--GGAAQQGNYGAFNG----------GGGEMDSNNLAPLHQKLLDIFQADTNPHGLSLDYCADVLKPQGIGYDDIRDAVVYLSSEGHIYTTVDDFHYKST 290          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.870e-41
Identity = 101/275 (36.73%), Postives = 135/275 (49.09%), Query Frame = 0
Query:   46 RVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFT--GGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 318
            + ++++QT+IP TIR I  A     D    +D  EL QV++V  +  V   ST   Y VED TG++  +M++D DE+E    RR A  Q  +VR++  ++ F+G+ S       +T  +IRP+ED NE+T H LE IY+HL HT+GP  APA   AAG                GF  P         +  G            G   FT  Q   +E           G+ +Q  VQQLG  G  A  VR  V  LA EGHLYST DEEH+K T
Sbjct:   49 KASRDRQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDENEMTATRRAACRQGVYVRIHAYLKVFNGQIS-------VTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPA--TAAG-----WNSTSSGFGTGGFNPPPGNNLSSTMALEGV----------SGNSGFTPVQAKALEAVNQIDSMDGPGVHVQAIVQQLGTSGFDAGAVRAAVEFLASEGHLYSTVDEEHYKVT 299          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A2D4CEA7_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEA7_PYTIN)

HSP 1 Score: 135 bits (341), Expect = 6.020e-34
Identity = 97/276 (35.14%), Postives = 148/276 (53.62%), Query Frame = 0
Query:   46 RVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAG--GXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGM-MAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 318
            R+ ++ QT++P+T+R ++N  + + D    VD  E+  V++VG + +VV  STN ++ ++DGTG++D R+F   D+ E+  E    L    +VR  GS+R F  + S       +    + PI D NE+T+H LE IYVH  HT+GPL +  G  AA   GXXXXXXXXXX      F QPQ   +     + G             M  +F+ +Q+ +++       + G+ I     QL  R +T  ++R+ +  L  EGH+YST DE HFK T
Sbjct:   46 RIARDAQTLVPVTVRQLLN--RSETDDSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLS-------LNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKAAADSGXXXXXXXXXXGSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNMESSFSPEQKAILDVLGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 5.780e-33
Identity = 101/250 (40.40%), Postives = 138/250 (55.20%), Query Frame = 0
Query:   71 DGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGG-GETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKSTN 319
            D  + VD  ++ Q+K+VG I  +   ST + Y +EDGTG++DC+++ D+ +SE + E+R    Q ++VR  G +R F G AS       + + ++RP+ D NE+T+H LE IYVHL +T+G  NA         XXXXXXXXXXXX   GF  P    +      +           G G   F+  Q  V+  FT  G GE G SI  AV+ L   G     VRE V  L+ EGHLYST D+EHFKST+
Sbjct:   11 DSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSEADAEKRALCRQGSYVRAVGVLRDFQGNAS-------VQLYDMRPVTDHNEITHHMLEAIYVHLQNTKGSKNA-----GQPXXXXXXXXXXXXXGVGGFNAPAVNTNLNSAMAS----------DGQGSGDFSTVQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKSTS 238          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: L1IVT0_GUITC (Replication protein A2, 32kDa n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IVT0_GUITC)

HSP 1 Score: 130 bits (326), Expect = 5.380e-32
Identity = 94/276 (34.06%), Postives = 133/276 (48.19%), Query Frame = 0
Query:   45 GRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPL--NAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGP---RGVTAAEVREIVGQLAGEGHLYSTTDEEHF 315
            G+ +  ++ ++P++I+ ++NA QD  D    +D  + +QV I+ +I DV   ST+ ++ +EDGTG +D  M+ D DESE  V  R   V  T+VRV G VR  +GK S       M   ++R + D NELTYH  + I+ HL +TRGPL  + P  G  +                 GF       SP Q    G          G  +             F   G  TG+SI   VQQ+     R V+ AEV   +  LA +GH+YST DEEHF
Sbjct:   27 GKKSNAEKGMLPVSIKQVMNAPQDSQDEDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDESEFMVRSRAEWVVGTYVRVVGQVRSHNGKRS-------MVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSPGKPSMGP----GFT------SPSQPGGAGAGRVDSSRPAGGPVTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.730e-32
Identity = 97/281 (34.52%), Postives = 141/281 (50.18%), Query Frame = 0
Query:   51 KQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDE--SEQEVERRDALVQHTFVRVYGSVRFF-DGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXG----------DGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 318
            +Q+++ + I+ ++ ++    D    +D  ++ Q+K+VG I +V   STN+ Y VED TG L  +MFH+  E  +++  E+R      T+VRV+G+VR + D + S AY         + PI D +E+T HALE IY HL +T+GPL  P   +  GG               G   P F G   Q  F      XXXXXX           +G   FT  QQ V + F G   E G SI      L   G++  +V   V  L+ EGHLYST D++H++ST
Sbjct:   64 QQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAY--------TMTPITDMDEVTLHALETIYTHLFNTKGPL--PGKASTFGGAGVAQPMN-------GVGSPGFNGGSSQHGFTSPGNNXXXXXXXXMYNNSNMDPEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRTDVSTAVQFLSSEGHLYSTIDDDHYRST 327          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A1Y1Z7U3_9FUNG (Replication protein A, subunit RPA32 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z7U3_9FUNG)

HSP 1 Score: 128 bits (321), Expect = 2.130e-31
Identity = 89/288 (30.90%), Postives = 135/288 (46.88%), Query Frame = 0
Query:   32 SPAGXXXXXXXXXGRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKSTN 319
            SP G          R     Q + P++I+ ++ A Q   D  F VD  EL Q+  +G IR     STN SYIVEDGTG +D R + ++D++E + ++R  LV+  +VRV G  + F  K        H+   ++RPIED NE+T+H LEV+YVHL  TR P     G                     G+ QP F G P   +               G     + + ++    +      G+ +++  Q+L  +    AE+ + +  L GEGHLYST D++H + T+
Sbjct:   16 SPFGESASTPTGTKRGGAAAQNLTPVSIKQLLEATQIHADAPFKVDEHELSQITFIGIIRRQSEQSTNVSYIVEDGTGSIDVRTWLENDDNEIQQQKRAQLVEGIYVRVVGQFKQFASKR-------HVVAFSMRPIEDYNEITHHFLEVVYVHLFRTRNPSVKHEG-------------------EQGY-QPSFSGDPFNPTGQYGNQAYKQPEPVYGNEFKPSHKAIIYAIKSFPDTNEGVHVESIAQKLSSQ-FGRAEISQAIEWLVGEGHLYSTIDDDHVRCTD 275          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A1V9Z400_9STRA (Replication protein A 32 kDa subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z400_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.880e-30
Identity = 88/283 (31.10%), Postives = 136/283 (48.06%), Query Frame = 0
Query:   45 GRVNKEKQTIIPLTIRMIVNA-KQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNA--------PAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKST 318
            G  +++ QT+ P+T+R ++ A + +  D    VD  E+  V+IVG + DV   STN ++ V DGTGL+  R+F  +D+   + +  ++L    +V   G++R F GK S       +T  ++ P+E+ N++T+H LE IY HL +  G LN+        P  GA  GG                F     GG  QQ ++                      QQ +++       + G+SI    QQL  R +  A++RE +G L  EGH+YST DE HFK T
Sbjct:   28 GGNSRDNQTLTPVTVRQLMAAIRAEGGDDTVHVDGKEVNNVEIVGLLTDVSQNSTNITFSVNDGTGLISARLFLQADDDHYQQQLVESLRDGVYVAAVGNLRTFGGKTS-------LTCFSVTPVENFNQVTHHFLECIYTHLRNVHGALNSAPTAMKQDPGFGAQTGGYNS-------------FGMSTGGGFGQQSTYQNFAATDSGFSD--------PGQQAILDILGASSLDMGLSIDQIKQQLNGR-LNDAQLREALGYLTNEGHIYSTIDENHFKRT 281          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: A0A433QK24_9FUNG (RPA_C domain-containing protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QK24_9FUNG)

HSP 1 Score: 127 bits (319), Expect = 2.230e-30
Identity = 82/268 (30.60%), Postives = 135/268 (50.37%), Query Frame = 0
Query:   52 QTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKSTN 319
            Q++ P+T++ ++ A Q   D  F +D  ++ QV  V  IR++   STN SY++EDGTG +D R + D D+S+ E ++R    +  ++RV G +  ++ K        H+   +IRP++D NE++YH L+ +YVHL+ T+G L + A  AAA                         G  +  + NG           D  +    KQ+        G  + GI +Q  V+QLG       E+R+ +  L+GEGHL+ST D++H + T+
Sbjct:  108 QSLRPVTVKQLITAVQPHADADFKIDGGDISQVTFVAVIREITEQSTNVSYLMEDGTGQIDVRKWIDVDDSDHEAQKRSEWREGAYMRVIGHLNLYNQKR-------HVVAYHIRPVKDHNEVSYHQLDALYVHLMFTKGLLPSLATPAAAASNGNGHSFNGSAYNPHNASA----GIYRTGTANGESSRFPNPLYND--IIKITKQR--------GDAQEGIHVQELVRQLGQ--FPPNEIRQAIEWLSGEGHLFSTIDDDHVQVTD 352          
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Match: UPI00201E87CE (replication protein A 32 kDa subunit-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201E87CE)

HSP 1 Score: 124 bits (312), Expect = 4.170e-30
Identity = 98/290 (33.79%), Postives = 138/290 (47.59%), Query Frame = 0
Query:   32 SPAGXXXXXXXXXGRVNKEKQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNSSYIVEDGTGL-LDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGKASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGAAAGGXXXXXXXXXXXXXXXGFRQPQFGGSPQQQSFNGXXXXXXXXXXGDGMMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQLAGEGHLYSTTDEEHFKSTNG 320
            SP G          +     Q I+P T+  ++NA  DQ D KF   + EL QV IVG +R V    T   Y ++D TG  L+ + F D+DE+  E ER  A+ ++T+VRVYG +R F GK S    T  MT     P+ D NEL+ H LEVI+ H+  + G      GGA A                 GF     GG                     G+    ++ Q++++       +TG SI    +QL  R V   ++RE V  L+GEGH+YST DE+H+K+T+G
Sbjct:   25 SPGGFGTPQQSQERKSRTRAQNIMPSTVAQVLNA--DQTDDKFYQGDVELSQVTIVGLVRTVKESPTRIDYEIDDMTGPPLEVKQFVDNDENLPEEERVQAMRENTYVRVYGHLRSFAGKRSVV--TFKMT-----PLTDMNELSCHMLEVIHSHVTLSSG--QGAGGGAMAS-----------VNSGAGFSDVGSGGGGSSTI--------------PGLSPLQSQIQLIIKNHPS---DTGASIDAVCKQL--RNVPEQQIREAVDFLSGEGHIYSTIDEDHYKATDG 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1648.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU42_9STRA2.750e-4335.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SSA9_9STRA5.870e-4136.73Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2D4CEA7_PYTIN6.020e-3435.14Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A7S2B4J1_9STRA5.780e-3340.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
L1IVT0_GUITC5.380e-3234.06Replication protein A2, 32kDa n=2 Tax=Guillardia t... [more]
D8LPM7_ECTSI6.730e-3234.52RPA_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A1Y1Z7U3_9FUNG2.130e-3130.90Replication protein A, subunit RPA32 n=1 Tax=Basid... [more]
A0A1V9Z400_9STRA1.880e-3031.10Replication protein A 32 kDa subunit n=1 Tax=Achly... [more]
A0A433QK24_9FUNG2.230e-3030.60RPA_C domain-containing protein (Fragment) n=2 Tax... [more]
UPI00201E87CE4.170e-3033.79replication protein A 32 kDa subunit-like n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014646Replication factor A protein 2PIRSFPIRSF036949RPA32coord: 20..319
e-value: 1.3E-47
score: 160.1
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 47..190
e-value: 1.1E-36
score: 127.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 54..189
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 249..319
e-value: 1.5E-16
score: 61.9
IPR014892Replication protein A, C-terminalPFAMPF08784RPA_Ccoord: 232..313
e-value: 8.5E-9
score: 36.0
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 84..168
e-value: 2.4E-7
score: 30.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..47
NoneNo IPR availablePANTHERPTHR13989:SF16REPLICATION PROTEIN A2coord: 8..318
NoneNo IPR availableCDDcd04478RPA2_DBD_Dcoord: 83..186
e-value: 1.30357E-26
score: 98.8256
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 8..318
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 255..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1648contigP-wetherbeei_contig1648:1656..3610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1648.3.2mRNA_P-wetherbeei_contig1648.3.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1648 1200..4072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1648.3.2 ID=prot_P-wetherbeei_contig1648.3.2|Name=mRNA_P-wetherbeei_contig1648.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MEYGAQGGGYFGGGGGGFIQGANGSPGYPDGSPAGGGGGGGGAGGRVNKE
KQTIIPLTIRMIVNAKQDQPDGKFMVDNCELQQVKIVGFIRDVVAMSTNS
SYIVEDGTGLLDCRMFHDSDESEQEVERRDALVQHTFVRVYGSVRFFDGK
ASDAYGTMHMTVNNIRPIEDTNELTYHALEVIYVHLLHTRGPLNAPAGGA
AAGGGFAVGGGGFGMGGGGGFRQPQFGGSPQQQSFNGGGMGMGIGGGGDG
MMAFTAKQQMVVECFTGGGGETGISIQTAVQQLGPRGVTAAEVREIVGQL
AGEGHLYSTTDEEHFKSTNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014646Rfa2/RPA32
IPR012340NA-bd_OB-fold
IPR036388WH-like_DNA-bd_sf
IPR014892RPA_C
IPR004365NA-bd_OB_tRNA
IPR040260RFA2-like
IPR036390WH_DNA-bd_sf