prot_P-wetherbeei_contig16372.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig16372.2.1
Unique Name	prot_P-wetherbeei_contig16372.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	104

Homology

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A357FFE4_9RHOB (GntR family transcriptional regulator n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A357FFE4_9RHOB)

HSP 1 Score: 114 bits (285), Expect = 5.570e-29
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    7 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            G VD  +P PLYHQ+YLILR +I  G +  GA LP+E E S  + VSRITAKRAL++LA DGLV+R RGRGT VV    + PV+AN+ GL+ENLL +G
Sbjct:   22 GHVDERLPMPLYHQVYLILRNKILTGEYGFGALLPSEQETSETFGVSRITAKRALNDLAGDGLVLRERGRGTKVVFHAPTPPVKANVEGLLENLLAMG 119

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A7X2FR46_9PROT (UTRA domain-containing protein n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FR46_9PROT)

HSP 1 Score: 109 bits (273), Expect = 3.110e-27
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    7 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            GGVD   PTPLYHQ++ +LR++I  GA+E   +LP+E ++   + VSRITAKRALDELAADGLV R R RGT V  +  + PV A+++GL EN++ +G
Sbjct:   14 GGVDPSNPTPLYHQLFTLLRDRIFDGAYEEDEKLPSEQQLVDLFGVSRITAKRALDELAADGLVYRARARGTRVAAQTRTRPVNASVHGLFENVMSLG 111

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A545TG17_9PROT (GntR family transcriptional regulator n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TG17_9PROT)

HSP 1 Score: 108 bits (269), Expect = 1.940e-26
Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 0

Query:   10 DSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
              G+ TPLYHQIYLIL+ QI  G + + ARLP+E +++  + VSRITAKRA+DELAA+GLVVR R RGT V+ +  S P+ +++ GL+ENL+ +G
Sbjct:   33 SQGLKTPLYHQIYLILKGQITDGVYSTDARLPSEQDLTERFGVSRITAKRAMDELAAEGLVVRERARGTRVIYQPPSAPIASSVEGLLENLIAMG 127

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A5J4ECA5_9BACT (HTH-type transcriptional repressor YvoA n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4ECA5_9BACT)

HSP 1 Score: 105 bits (263), Expect = 8.250e-26
Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 0

Query:    9 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            +D   PTPLYHQI+LILR++I  G +   + +P+E EI   + VSRITAKRALDELA+  LVVRRRGRGTSV  + AS PV  ++ GL E+LL +G
Sbjct:   14 IDESSPTPLYHQIFLILRDRISDGTYAFESAMPSENEICRIFGVSRITAKRALDELASANLVVRRRGRGTSVSHRTASLPVHYSVEGLFEDLLAMG 109

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A553FCT5_9GAMM (GntR family transcriptional regulator n=1 Tax=Thalassomonas sp. M1454 TaxID=2594477 RepID=A0A553FCT5_9GAMM)

HSP 1 Score: 104 bits (259), Expect = 2.590e-25
Identity = 51/96 (53.12%), Postives = 73/96 (76.04%), Query Frame = 0

Query:    9 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            + S +PTPLYHQ+YL L+E+I  G    G ++PTE ++S A+SVSRITAKRA+DELA +G + RRRG+G+ V+ K  +E V A ++GL+ENL ++G
Sbjct:   16 LKSDVPTPLYHQVYLFLKEKIHLGDIPFGEKMPTEHQLSEAFSVSRITAKRAMDELAEEGYISRRRGKGSHVIYKNRAEHVAAPLSGLLENLKVLG 111

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A3M1GDX1_9PROT (GntR family transcriptional regulator (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1GDX1_9PROT)

HSP 1 Score: 99.4 bits (246), Expect = 3.540e-25
Identity = 45/77 (58.44%), Postives = 63/77 (81.82%), Query Frame = 0

Query:    4 IPAGGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSV 80
            +P+  +DS +PTPLYHQIY+++RE+I +G +  G+ +P+E E+   + VSRITAKRALDELA++GLV RRRGRGT+V
Sbjct:   13 LPSEAIDSALPTPLYHQIYVLMREKIISGVYHDGSLIPSEHELEKMFGVSRITAKRALDELASEGLVTRRRGRGTTV 89

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A2E7QJD2_9PROT (GntR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QJD2_9PROT)

HSP 1 Score: 103 bits (258), Expect = 3.570e-25
Identity = 52/92 (56.52%), Postives = 71/92 (77.17%), Query Frame = 0

Query:   13 MPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            M  PLYHQIYLILR+++ +G F    R+P+E E+   Y VSRITA+RALDELAA+GLVVR+RGRGT    +  ++P+E+++ GL+ENLL +G
Sbjct:    1 MRMPLYHQIYLILRQKLLSGEFAYDDRIPSEQELVEEYEVSRITARRALDELAAEGLVVRQRGRGTRARFRPPTQPLESSVEGLLENLLAMG 92

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A4P7JLN1_9GAMM (GntR family transcriptional regulator n=1 Tax=Thalassotalea sp. HSM 43 TaxID=2552945 RepID=A0A4P7JLN1_9GAMM)

HSP 1 Score: 103 bits (258), Expect = 3.640e-25
Identity = 50/96 (52.08%), Postives = 73/96 (76.04%), Query Frame = 0

Query:    9 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            + S +PTPLYHQ+YL L+E+I  G    G ++PTE ++S A+SVSRITAKRA+DELA +G + RRRG+G+ V+ K  +E ++A ++GL+ENL  +G
Sbjct:   16 LKSDVPTPLYHQVYLFLKEKIHLGEIPFGEKMPTEHQLSEAFSVSRITAKRAMDELAEEGYISRRRGKGSHVIYKHRAEQLKAPLSGLLENLKTLG 111

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A3M0CRU6_9PROT (GntR family transcriptional regulator n=1 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0CRU6_9PROT)

HSP 1 Score: 103 bits (258), Expect = 4.740e-25
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0

Query:    7 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMV 103
            G V+  +PTPLYHQIY++LRE+I  G +  G+ + +E E+   + VSRITAKRALDELAA+GLV R+RGRGT+V  K       +++ GLIENLL +
Sbjct:   14 GAVNESLPTPLYHQIYVLLREKIMTGVYPDGSLIHSEHELEKMFGVSRITAKRALDELAAEGLVARQRGRGTTVTYKQPVSHPSSDMEGLIENLLTI 110

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BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A523FFA8_9PROT (GntR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FFA8_9PROT)

HSP 1 Score: 103 bits (258), Expect = 4.930e-25
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 0

Query:    9 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 104
            VD   PTPLYHQIY ILR +I    +  G +  +E E++ AY VSRITA+RALD+LA DGLVVR+RGRGT V     S P++A I G +ENLL +G
Sbjct:   14 VDGKFPTPLYHQIYSILRGKIVEREYADGDQFLSEKEVAEAYGVSRITARRALDDLAKDGLVVRKRGRGTQVTYNAPSRPLQAGIEGALENLLAMG 109

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A357FFE4_9RHOB	5.570e-29	59.18	GntR family transcriptional regulator n=4 Tax=Rhod...	[more]
A0A7X2FR46_9PROT	3.110e-27	54.08	UTRA domain-containing protein n=1 Tax=Alphaproteo...	[more]
A0A545TG17_9PROT	1.940e-26	54.74	GntR family transcriptional regulator n=1 Tax=Deni...	[more]
A0A5J4ECA5_9BACT	8.250e-26	57.29	HTH-type transcriptional repressor YvoA n=1 Tax=ba...	[more]
A0A553FCT5_9GAMM	2.590e-25	53.13	GntR family transcriptional regulator n=1 Tax=Thal...	[more]
A0A3M1GDX1_9PROT	3.540e-25	58.44	GntR family transcriptional regulator (Fragment) n...	[more]
A0A2E7QJD2_9PROT	3.570e-25	56.52	GntR family transcriptional regulator n=1 Tax=Rhod...	[more]
A0A4P7JLN1_9GAMM	3.640e-25	52.08	GntR family transcriptional regulator n=1 Tax=Thal...	[more]
A0A3M0CRU6_9PROT	4.740e-25	53.61	GntR family transcriptional regulator n=1 Tax=Eila...	[more]
A0A523FFA8_9PROT	4.930e-25	56.25	GntR family transcriptional regulator n=1 Tax=Alph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000524	Transcription regulator HTH, GntR	PRINTS	PR00035	HTHGNTR	coord: 40..54 score: 38.99 coord: 54..70 score: 39.75
IPR000524	Transcription regulator HTH, GntR	SMART	SM00345	gntr3	coord: 21..80 e-value: 4.1E-20 score: 82.8
IPR000524	Transcription regulator HTH, GntR	PFAM	PF00392	GntR	coord: 17..80 e-value: 5.4E-21 score: 74.0
IPR000524	Transcription regulator HTH, GntR	PROSITE	PS50949	HTH_GNTR	coord: 15..83 score: 22.805855
IPR000524	Transcription regulator HTH, GntR	CDD	cd07377	WHTH_GntR	coord: 16..80 e-value: 4.09093E-24 score: 85.1916
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 14..102 e-value: 6.9E-24 score: 86.5
None	No IPR available	PANTHER	PTHR44846:SF1	MANNOSYL-D-GLYCERATE TRANSPORT/METABOLISM SYSTEM REPRESSOR MNGR-RELATED	coord: 10..100
None	No IPR available	PANTHER	PTHR44846	FAMILY NOT NAMED	coord: 10..100
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 14..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig16372	contig	P-wetherbeei_contig16372:1211..1522 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig16372.2.1	mRNA_P-wetherbeei_contig16372.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig16372 1211..1522 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig16372.2.1 ID=prot_P-wetherbeei_contig16372.2.1|Name=mRNA_P-wetherbeei_contig16372.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp
AAAIPAGGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAY
SVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENL
LMVG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000524	Tscrpt_reg_HTH_GntR
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf