prot_P-wetherbeei_contig16343.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16343.1.1
Unique Nameprot_P-wetherbeei_contig16343.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length114
Homology
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.260e-31
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAP-GVKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTV--SAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            MNKA AF+ +G  FG+ SAV P G KGF+YLEA NEP V+ +I+G+  IYHSKLR VPI DM  VL+V  + +A+P+R+ Q++RL R P Y DDLA+V E+   G RAVV +IPR+D
Sbjct:  179 MNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKP-YTDDLAKVVEVLAGGERAVVQFIPRID 294          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 6.010e-29
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAP-GVKGFIYLEAMNEPDVR------RSISGMSKIYHSKLRMVPIRDMPNVLTV--SAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            MNKA AF+ +G  FG+ SAV P G KGF+YLEA NEP V+      R + G+  IYHSKLR VPI DM  VL+V  + +A+P+R+ Q++RL R P Y DDLA+V E+   G RAVV +IPR+D
Sbjct:   31 MNKALAFKANGQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGVRGVCLIYHSKLRKVPIPDMTAVLSVRSATRAKPVRQNQFIRLKRKP-YTDDLAKVVEVLAGGERAVVQFIPRID 152          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A7S1TVX0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVX0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.770e-23
Identity = 54/115 (46.96%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAPGVKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKAR-PLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            M+KA A  R+GN  GI SA+  G K  I++E  +EP V+ ++ G++ +Y  K+++VP+  M  VL V+ +A+ PLREGQ+VRL R  +YK DLA+V E+ D GS+A+V  +PRLD
Sbjct:   37 MSKAIAEAREGNDIGIESAMTTGSKEIIFVEGRSEPKVKAALGGINNVYMRKIKLVPLGQMTEVLNVARRAKKPLREGQWVRLKRG-VYKGDLAKVLEMVDGGSKALVQLVPRLD 150          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A830HJZ3_9CHLO (Transcription elongation factor SPT5 n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HJZ3_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 6.680e-15
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAPG-VKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKA-RPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            M K   F   G    I S  +   +KG IY+EAM E  VR +  G   IY SK+R+VPI +M  V+TV  +A   +R GQ+VR+ R   YKDDLARV E+ ++  +  V  +PRLD
Sbjct:  274 MQKCVDFASRGTPLMIYSVTSRDELKGHIYVEAMKESHVRDATRGFHFIYQSKVRLVPIDEMVEVVTVVRRASESIRPGQWVRM-RTGAYKDDLARVAEIDEAVGQITVQLVPRLD 388          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A7S2UYJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYJ7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.030e-14
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0
Query:   31 EAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            EA NEP  R+++ G   +    +++VP++DM  V+TV A+ +P++ G +VR+ R  +YK DLA+  E+ DSG++ VV  IPRLD
Sbjct:    1 EATNEPAARQAVQGFRLLSAWSMKLVPVQDMTAVMTVKARRKPIKAGNWVRM-RRGIYKGDLAKAVEVLDSGNKIVVQVIPRLD 83          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A8K0M2J9_9HYPO (Uncharacterized protein n=2 Tax=Ilyonectria TaxID=1079112 RepID=A0A8K0M2J9_9HYPO)

HSP 1 Score: 78.6 bits (192), Expect = 1.240e-14
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    5 AAFRRDGNKFGILSAVAPGVKGFIYLEAMNEPDVRRSISGMSKIY-HSKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            AAF R GN+          +KGFIY+EA  + D+ +++  M  +Y HSK+ +V I+DMP +L V+ K   L  G +VRL RP  +  DLA+V ++ ++G  A V +IPRLD
Sbjct:  247 AAFERGGNE--------SVMKGFIYVEAQRQTDILKALDSMLNVYPHSKMILVEIKDMPELLRVT-KTPTLEPGAWVRLKRPVKHSGDLAQVLDVTENGLEARVRFIPRLD 348          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A0L0DWS7_THETB (Transcription elongation factor SPT5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DWS7_THETB)

HSP 1 Score: 77.8 bits (190), Expect = 2.240e-14
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVA-PGVKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            M K A  +  G + GI S +    ++G+ ++EA  E  V+ +ISG+  +  S + ++P+++M + L V+A+   LR+  +VR+ R   Y+ DLAR+  L DSGSRAVV  IPRLD
Sbjct:  125 MYKFADKQSRGKRMGITSVICRDNLRGYFFVEARREDTVKAAISGLRGVRQSSVTILPLKEMVDTLEVTAQDVTLRKDAWVRMKRGQ-YRGDLARIVRLDDSGSRAVVKLIPRLD 238          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A6A5Y9T8_9PLEO (Transcription elongation factor SPT5 n=1 Tax=Aaosphaeria arxii CBS 175.79 TaxID=1450172 RepID=A0A6A5Y9T8_9PLEO)

HSP 1 Score: 77.8 bits (190), Expect = 2.300e-14
Identity = 41/111 (36.94%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    7 FRRDGNKFGILSAVAPG--VKGFIYLEAMNEPDVRRSISGMSKIYHSKLRM-VPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            + R G + G+ SA   G  + G++YLEA  + D+   I G+  I+ S+ ++ + +++ P++L    K  PL EG++VR++RPPLY+ DLA+V E++ +G    V  +PRLD
Sbjct:  230 YARAGRQIGVYSAFERGGTMTGYMYLEADAKQDMLSLIDGVQNIFMSQPQIAIEVKERPDLLR-KRKRTPLEEGKFVRMVRPPLYRGDLAKVVEVHSNGLDCTVQLVPRLD 339          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A077YWE2_TRITR (Transcription elongation factor SPT5 n=4 Tax=Trichuris TaxID=36086 RepID=A0A077YWE2_TRITR)

HSP 1 Score: 77.0 bits (188), Expect = 4.310e-14
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAP-GVKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAV-VAYIPRLD 114
            M KA A+   G    I SA+   G+KG IY+EA  +  V ++I G+S +  SK++MVPI +MP+VL V    + L+ G +VRL R  +++DDLA+V+ + D   + V +  IPR+D
Sbjct:  211 MRKAIAYENHGEPLQITSAIVKEGLKGIIYIEAFKQSHVVQAIEGISALNSSKIQMVPISEMPDVLNVVKDLQALKPGVFVRLKRT-MFRDDLAQVDWV-DLAQKVVHLKLIPRID 324          
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Match: A0A5S6QVE8_TRIMR (Transcription elongation factor SPT5 n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QVE8_TRIMR)

HSP 1 Score: 76.6 bits (187), Expect = 5.820e-14
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    1 MNKAAAFRRDGNKFGILSAVAP-GVKGFIYLEAMNEPDVRRSISGMSKIYHSKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYDSGSRAVVAYIPRLD 114
            M KA A+   G    I SA+   G+KG IY+EA  +  V ++I G+S +  SK++MVPI +MP+VL V    + L+ G +VRL R  +++DDLA+V+ +  +     +  IPR+D
Sbjct:  191 MRKAIAYENHGEPLQITSAIVKEGLKGIIYVEAFKQSHVIQAIEGISALNASKVQMVPISEMPDVLNVVKDLQALKPGVFVRLKRT-MFRDDLAQVDWVDLAQKMVHLKLIPRID 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16343.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI29_ECTSI4.260e-3156.41Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A6H5JFI1_9PHAE6.010e-2953.66Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A7S1TVX0_9STRA2.770e-2346.96Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A830HJZ3_9CHLO6.680e-1543.10Transcription elongation factor SPT5 n=1 Tax=Pycno... [more]
A0A7S2UYJ7_9STRA1.030e-1442.86Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8K0M2J9_9HYPO1.240e-1441.44Uncharacterized protein n=2 Tax=Ilyonectria TaxID=... [more]
A0A0L0DWS7_THETB2.240e-1439.13Transcription elongation factor SPT5 n=1 Tax=Theca... [more]
A0A6A5Y9T8_9PLEO2.300e-1436.94Transcription elongation factor SPT5 n=1 Tax=Aaosp... [more]
A0A077YWE2_TRITR4.310e-1440.52Transcription elongation factor SPT5 n=4 Tax=Trich... [more]
A0A5S6QVE8_TRIMR5.820e-1439.13Transcription elongation factor SPT5 n=1 Tax=Trich... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005100NGN domainPFAMPF03439Spt5-NGNcoord: 2..65
e-value: 1.0E-11
score: 44.5
IPR036735NusG, N-terminal domain superfamilyGENE3D3.30.70.940coord: 1..78
e-value: 1.1E-16
score: 62.4
IPR039659Transcription elongation factor SPT5PANTHERPTHR11125SUPPRESSOR OF TY 5coord: 1..114
NoneNo IPR availablePANTHERPTHR11125:SF7TRANSCRIPTION ELONGATION FACTOR SPT5coord: 1..114
IPR039385NGN domain, eukaryoticCDDcd09888NGN_Eukcoord: 1..66
e-value: 1.72654E-23
score: 84.5045

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16343contigP-wetherbeei_contig16343:497..1482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16343.1.1mRNA_P-wetherbeei_contig16343.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16343 476..1482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16343.1.1 ID=prot_P-wetherbeei_contig16343.1.1|Name=mRNA_P-wetherbeei_contig16343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MNKAAAFRRDGNKFGILSAVAPGVKGFIYLEAMNEPDVRRSISGMSKIYH
SKLRMVPIRDMPNVLTVSAKARPLREGQYVRLIRPPLYKDDLARVEELYD
SGSRAVVAYIPRLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005100NGN-domain
IPR036735NGN_dom_sf
IPR039659SPT5
IPR039385NGN_Euk