prot_P-wetherbeei_contig1632.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1632.1.1
Unique Nameprot_P-wetherbeei_contig1632.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length380
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1632.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 272..379
e-value: 8.8E-11
score: 43.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 86..179
e-value: 9.3E-16
score: 60.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 104..162
e-value: 2.7E-6
score: 27.3
coord: 307..354
e-value: 0.0023
score: 17.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 9.262356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..236
IPR044657Pentatricopeptide repeat-containing protein NFD5-likePANTHERPTHR46862OS07G0661900 PROTEINcoord: 86..164
coord: 303..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1632contigP-wetherbeei_contig1632:429..1568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1632.1.1mRNA_P-wetherbeei_contig1632.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1632 2..1568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1632.1.1 ID=prot_P-wetherbeei_contig1632.1.1|Name=mRNA_P-wetherbeei_contig1632.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=380bp
MPSGIVSSERHTANGSVVSLLERRPLETHSSHSVTLPPLPSFLFHCSCFT
FLPLSPLFFNRFLLPFPFLPTFFLLSPSLAPSLRKKALMRGYARRGMSNR
AFELLKRAKYRGVAVDVSMHNLCITACGMAGKWRNACDVIPAMRRAGIAP
NAASYAAAIAACAAAMRSKPGKRLPNESPGGDGGSDVGGGRGAASFSRNV
IRRGSNDGASAAARSDGDGSNDSDADNDDEDAESATAAEEGLVAAGVNDD
GSTGSAGRIDSPATAAATGGEAFSTASDGSPKTAAAPKQGSRVIAEFINA
ARRAVALLAEMRAAGVPVDGGTFTSLMQVHGAAGDTVGAAATLADMAAAG
IHPTPRARDALVEAHARAGDLPGAWAAIGA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR044657NFD5-like