prot_P-wetherbeei_contig162.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig162.4.1
Unique Nameprot_P-wetherbeei_contig162.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length608
Homology
BLAST of mRNA_P-wetherbeei_contig162.4.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.950e-27
Identity = 124/372 (33.33%), Postives = 170/372 (45.70%), Query Frame = 0
Query:   37 LYGVVCSFGHRHQTAGDKLV-SVNLIDETVPDPADSVNTNLFSSRWGDLPQVAMVGDILRFHRADLTVRATPFGPRPQLVARVQARSAWVLLRRRRLKAAVYQTGPEGXXXXXXXXXXXXXV-------------GTAAAGGHATSFDPR-EWEVLHNHGSMTIEANDVERARRLSDWFLGALPTIRFNNPGASKT-LSAVFAPPSPAAAAAAQENRLTQMDEYADVVGVLTGLEESTEGGQSAVSRFTVWDGTVPPVTLPTSEVDAAVDAA----IRAA---------GHLPPPLMPRAVRPSLLNVRVAAHGVPLLDLGLRMGLWVRLRRLQVRKNLVTRTLDAS-VGFTTAVNLLPPTTAEVHACVLAY 378
            +YGVVCSF HRHQ+ G  L  SV+L+DE+ P    +V  N FSS    LP   MVGDI+R HRA    +   +  RPQL+A   A  AW+++R+++     YQ  P G       XXXXXX              G  A GG   +  P  +WEV  +  + T+   D +R   LSDW     P +   +    K  +  +F  P        Q   +    E  D+V  LT   E  EGG  ++S   V DGT    ++P  E D   DAA    +RAA            PPP+      P+ L V V  +      L L  G+W+RLRRL + KN  T  + A  +   ++VN L P+  EV    ++Y
Sbjct:  229 VYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRA----KVQEYRGRPQLLAAGGA--AWLVIRKKKAMRETYQKCPIGGISSASGXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAILPATDWEVQSSSANYTLSQVDQDRCIALSDWLARKSPQLWLKSSSEVKVWVQDIFRRP--------QSGDVISKLEV-DLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRAALGKPGWSPGNPRPPPI------PAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSY 579          
BLAST of mRNA_P-wetherbeei_contig162.4.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 8.650e-21
Identity = 95/273 (34.80%), Postives = 128/273 (46.89%), Query Frame = 0
Query:   37 LYGVVCSFGHRHQTAGDKLV-SVNLIDETVPDPADSVNTNLFSSRWGDLPQVAMVGDILRFHRADLTVRATPFGPRPQLVARVQARSAWVLLRRRRLKAAVYQTGPEGXXXXXXXXXXXXXV-------------GTAAAGGHATSFDPR-EWEVLHNHGSMTIEANDVERARRLSDWFLGALPTIRFNNPGASKT-LSAVFAPPSPAAAAAAQENRLTQMDEYADVVGVLTGLEESTEGGQSAVSRFTVWDGTVPPVTLPTSEVDAAVDAAI 293
            +YGVVCSF HRHQ+ G  L  SV+L+DE+ P   D+V  N FSS    LP   MVGDI+R HRA    +   +  RPQL+A   A  AW+++R+++     YQ  P G        XXXXX              G  A GG A +  P  +WEV  +  + T+   D +R   LSDW     P +   +    K  +  +F  P        Q   +    E  D+V  LT   E  EGG  ++S   V DGT    ++P  E D   DAA+
Sbjct:  244 VYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDDAVPCNFFSSTLKGLPAPLMVGDIVRLHRA----KVQEYRGRPQLLAAGGA--AWLVIRKKKAMRETYQKCPIGGISPASGDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRP--------QSGDVISKLEV-DLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAAL 501          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig162.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCK4_9PHAE3.950e-2733.33Telo_bind domain-containing protein n=1 Tax=Ectoca... [more]
D7FIQ5_ECTSI8.650e-2134.80POT1 protection of telomeres 1 homolog n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011564Telomeric single stranded DNA binding POT1/Cdc13PFAMPF02765POT1coord: 35..139
e-value: 5.0E-8
score: 32.9
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 25..145
e-value: 1.1E-16
score: 62.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 29..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..510
IPR028389Protection of telomeres protein 1PANTHERPTHR14513PROTECTION OF TELOMERES 1coord: 5..587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig162contigP-wetherbeei_contig162:3157..4980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig162.4.1mRNA_P-wetherbeei_contig162.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig162 3127..5224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig162.4.1 ID=prot_P-wetherbeei_contig162.4.1|Name=mRNA_P-wetherbeei_contig162.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=608bp
MPSHYTYSALADLPGIIARQQQQQGQVQANRPVAVYLYGVVCSFGHRHQT
AGDKLVSVNLIDETVPDPADSVNTNLFSSRWGDLPQVAMVGDILRFHRAD
LTVRATPFGPRPQLVARVQARSAWVLLRRRRLKAAVYQTGPEGGGSNGAA
VLAGGGVGTAAAGGHATSFDPREWEVLHNHGSMTIEANDVERARRLSDWF
LGALPTIRFNNPGASKTLSAVFAPPSPAAAAAAQENRLTQMDEYADVVGV
LTGLEESTEGGQSAVSRFTVWDGTVPPVTLPTSEVDAAVDAAIRAAGHLP
PPLMPRAVRPSLLNVRVAAHGVPLLDLGLRMGLWVRLRRLQVRKNLVTRT
LDASVGFTTAVNLLPPTTAEVHACVLAYLAAATAPGTGAAGVVPLPISAR
IPANAGGAGAALPQTPVARTAPMTTLTLPRPLAATGLAVSGAGAAASQPF
RCSIEEILGLPAPAECRCQVRAIKFFTMPGGQVIRKRKRGATGGAGGDSS
GADGAGDGASDGTEHIMALRLEDETAAIDAIVCGETLVRVLLGGLSPDAV
EVDTAAAAQAQERLRWLVSGAEPHPMELTVASSYRNLPGGGREKTYAVLG
PIVPSAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011564Telomer_end-bd_POT1/Cdc13
IPR012340NA-bd_OB-fold
IPR028389POT1