prot_P-wetherbeei_contig16142.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig16142.1.1
Unique Name	prot_P-wetherbeei_contig16142.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	111

Homology

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A355TTR3_9BACT (50S ribosomal protein L23 n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TTR3_9BACT)

HSP 1 Score: 104 bits (260), Expect = 6.440e-27
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0

Query:    1 KVVSSVADLRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDGRPLFE 109
            K+ SSV +LR  T  D++ RP+ITEKS+   ADNKYTF V + ANK  IRNAV+ +F V VTKVTTVR  G ++R+ R   G  P+ KKA V++KAG +IE  G PLFE
Sbjct:    5 KITSSVHNLRYST-HDVLLRPLITEKSMEQHADNKYTFLVDLKANKFDIRNAVESMFNVTVTKVTTVRMRGKVKRRGRV-YGKRPDYKKAYVSIKAGDKIEVAGAPLFE 111

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A1V5BSH8_9FIRM (50S ribosomal protein L23 n=2 Tax=Pelotomaculum TaxID=191373 RepID=A0A1V5BSH8_9FIRM)

HSP 1 Score: 90.5 bits (223), Expect = 1.650e-21
Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 104
            RDI+++P+ITEKS + S DNKYTF V + ANK+ IR AV+ +F V V KV T+R  G ++R  R+  G TP+TKKA+VTLK G +IE F+G
Sbjct:    5 RDILRKPVITEKSTSLSKDNKYTFIVDLKANKVEIRQAVENLFKVKVKKVNTMRVKGKLKR-VRRIPGRTPDTKKAIVTLKEGDRIEIFEG 94

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A7C6UQ20_9FIRM (50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6UQ20_9FIRM)

HSP 1 Score: 89.7 bits (221), Expect = 3.320e-21
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 0

Query:   12 LTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 104
            +  RDII RPI+TEKS    ADNKYTFEVA+ ANK  I+ A++ +F V V KV T R  G +RR  R  EG T + KKAVVTL+ G  IE F+G
Sbjct:    2 MESRDIIIRPIVTEKSTDLMADNKYTFEVALRANKTQIKKAIEDIFAVKVIKVNTARVRGKLRRMGR-HEGYTSDWKKAVVTLQEGHHIEVFEG 94

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A522QTT6_9BACT (50S ribosomal protein L23 n=2 Tax=bacterium TaxID=1869227 RepID=A0A522QTT6_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 4.490e-21
Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0

Query:    9 LRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSI----RRKARKDEGVTPETKKAVVTLKAGQQIEFDGRPLFE 109
            +R +  RD++  P+ITEKS+AN+   +YTF VA AA K  IR+AV+ +F VNVTKV T    G +    RR+AR   G   + KKA+VTLK GQ+IE  G   FE
Sbjct:    1 MRIMDARDVVLAPLITEKSMANTMGQQYTFRVASAATKTQIRHAVEDIFKVNVTKVNTTNVKGKMKSFSRRRARPTSGKQSDWKKAIVTLKDGQKIELGGVNFFE 105

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A356BYB2_9FIRM (50S ribosomal protein L23 n=4 Tax=Firmicutes TaxID=1239 RepID=A0A356BYB2_9FIRM)

HSP 1 Score: 89.0 bits (219), Expect = 6.490e-21
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 104
            RDI+KRPI+TEKS    A+NKYTFEV + ANK+ ++ AV+ +F V V +V T+R  G +RR  R  EG T + KKAVVTLK G  IE  G
Sbjct:    4 RDILKRPIVTEKSTDLMAENKYTFEVDLRANKMQVKAAVEEIFNVEVEQVNTLRVKGKLRRMGR-HEGYTSDWKKAVVTLKPGHSIEVFG 92

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A3C1QPY1_9FIRM (50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3C1QPY1_9FIRM)

HSP 1 Score: 89.0 bits (219), Expect = 6.490e-21
Identity = 53/90 (58.89%), Postives = 59/90 (65.56%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 104
            RDIIKRPIITEKS    A NKYTFEV + A K  I+ AV+ +FGV V KV T R  G +RR  R  EG T + KKAVVTLK G  IE  G
Sbjct:    4 RDIIKRPIITEKSTDLMAQNKYTFEVDMRATKPQIKAAVEEIFGVKVEKVNTARIRGKLRRMGR-HEGYTSDWKKAVVTLKPGHSIEVFG 92

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A7C6IPK4_9CLOT (50S ribosomal protein L23 n=1 Tax=Natronincola sp. TaxID=2699832 RepID=A0A7C6IPK4_9CLOT)

HSP 1 Score: 88.6 bits (218), Expect = 9.200e-21
Identity = 52/90 (57.78%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 104
            RDIIK+PI+TEKS    ADNKYTFEV + A+KI I+ AV+ +F V V KV T R  G +RR  R  EG T   KKAVVTLK G  IE  G
Sbjct:    4 RDIIKKPIVTEKSTDLMADNKYTFEVDLRASKIQIKLAVEEIFDVKVQKVNTSRVKGKLRRMGR-HEGYTSNWKKAVVTLKPGHSIEVFG 92

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A1V5BMP5_9FIRM (50S ribosomal protein L23 n=2 Tax=unclassified Pelotomaculum TaxID=2621639 RepID=A0A1V5BMP5_9FIRM)

HSP 1 Score: 87.8 bits (216), Expect = 1.900e-20
Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 104
            RDI+++P++TEKS +   DNKYTF V + ANK+ IR AV+ +F V V KV T+R  G I+R  R+  G TP+TKKA+VTLK G +IE F+G
Sbjct:    5 RDILRKPLVTEKSTSLLKDNKYTFMVDLKANKVEIRQAVEDLFKVKVEKVNTMRVKGRIKR-VRRIPGKTPDTKKAIVTLKKGDRIEIFEG 94

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: R4KHC1_9FIRM (50S ribosomal protein L23 n=3 Tax=Desulfallaceae TaxID=2867375 RepID=R4KHC1_9FIRM)

HSP 1 Score: 87.4 bits (215), Expect = 2.700e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 104
            RDIIK+P++TEKS+    +NKYTF V + ANKI IR AV+ +F V V KV T+R  G ++R  R   G TP+ KKA+VTLK GQ+I+ F+G
Sbjct:    5 RDIIKKPVVTEKSMGLVEENKYTFIVDMGANKIEIRQAVEELFNVKVDKVRTMRVKGKLKR-VRNRWGKTPDRKKAIVTLKEGQKIQLFEG 94

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BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A0F2PTV8_9FIRM (50S ribosomal protein L23 n=2 Tax=Peptococcaceae TaxID=186807 RepID=A0A0F2PTV8_9FIRM)

HSP 1 Score: 87.0 bits (214), Expect = 3.830e-20
Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 0

Query:   15 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 104
            RDI+KRP++TEKS+A  A+NK+TF V + ANK+ I+ AV+ +F V V KV T+R  G +RR  R   G TP+ KKA+VTLK G +IE F+G
Sbjct:    5 RDILKRPVVTEKSMALQAENKFTFIVDLKANKVEIKKAVEELFKVKVKKVHTMRYKGKLRR-VRNVLGRTPDYKKAIVTLKEGDKIELFEG 94

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A355TTR3_9BACT	6.440e-27	55.05	50S ribosomal protein L23 n=1 Tax=bacterium UBP9_U...	[more]
A0A1V5BSH8_9FIRM	1.650e-21	54.95	50S ribosomal protein L23 n=2 Tax=Pelotomaculum Ta...	[more]
A0A7C6UQ20_9FIRM	3.320e-21	55.32	50S ribosomal protein L23 n=1 Tax=Firmicutes bacte...	[more]
A0A522QTT6_9BACT	4.490e-21	48.57	50S ribosomal protein L23 n=2 Tax=bacterium TaxID=...	[more]
A0A356BYB2_9FIRM	6.490e-21	54.44	50S ribosomal protein L23 n=4 Tax=Firmicutes TaxID...	[more]
A0A3C1QPY1_9FIRM	6.490e-21	58.89	50S ribosomal protein L23 n=1 Tax=Firmicutes bacte...	[more]
A0A7C6IPK4_9CLOT	9.200e-21	57.78	50S ribosomal protein L23 n=1 Tax=Natronincola sp....	[more]
A0A1V5BMP5_9FIRM	1.900e-20	53.85	50S ribosomal protein L23 n=2 Tax=unclassified Pel...	[more]
R4KHC1_9FIRM	2.700e-20	53.85	50S ribosomal protein L23 n=3 Tax=Desulfallaceae T...	[more]
A0A0F2PTV8_9FIRM	3.830e-20	53.85	50S ribosomal protein L23 n=2 Tax=Peptococcaceae T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013025	Ribosomal protein L25/L23	PFAM	PF00276	Ribosomal_L23	coord: 16..102 e-value: 3.5E-27 score: 94.6
IPR013025	Ribosomal protein L25/L23	PANTHER	PTHR11620	60S RIBOSOMAL PROTEIN L23A	coord: 5..99
IPR013025	Ribosomal protein L25/L23	HAMAP	MF_01369_B	Ribosomal_L23_B	coord: 15..105 score: 17.800812
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..106 e-value: 3.5E-29 score: 103.0
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 15..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig16142	contig	P-wetherbeei_contig16142:93..425 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig16142.1.1	mRNA_P-wetherbeei_contig16142.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig16142 93..425 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig16142.1.1 ID=prot_P-wetherbeei_contig16142.1.1|Name=mRNA_P-wetherbeei_contig16142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
KVVSSVADLRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIR
NAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQI
EFDGRPLFEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013025	Ribosomal_L25/23
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR012678	Ribosomal_L23/L15e_core_dom_sf