mRNA_P-wetherbeei_contig16142.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A355TTR3_9BACT (50S ribosomal protein L23 n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TTR3_9BACT) HSP 1 Score: 104 bits (260), Expect = 6.440e-27 Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 KVVSSVADLRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDGRPLFE 327
K+ SSV +LR T D++ RP+ITEKS+ ADNKYTF V + ANK IRNAV+ +F V VTKVTTVR G ++R+ R G P+ KKA V++KAG +IE G PLFE
Sbjct: 5 KITSSVHNLRYST-HDVLLRPLITEKSMEQHADNKYTFLVDLKANKFDIRNAVESMFNVTVTKVTTVRMRGKVKRRGRV-YGKRPDYKKAYVSIKAGDKIEVAGAPLFE 111
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A1V5BSH8_9FIRM (50S ribosomal protein L23 n=2 Tax=Pelotomaculum TaxID=191373 RepID=A0A1V5BSH8_9FIRM) HSP 1 Score: 90.5 bits (223), Expect = 1.650e-21 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 312
RDI+++P+ITEKS + S DNKYTF V + ANK+ IR AV+ +F V V KV T+R G ++R R+ G TP+TKKA+VTLK G +IE F+G
Sbjct: 5 RDILRKPVITEKSTSLSKDNKYTFIVDLKANKVEIRQAVENLFKVKVKKVNTMRVKGKLKR-VRRIPGRTPDTKKAIVTLKEGDRIEIFEG 94
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A7C6UQ20_9FIRM (50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6UQ20_9FIRM) HSP 1 Score: 89.7 bits (221), Expect = 3.320e-21 Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 34 LTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 312
+ RDII RPI+TEKS ADNKYTFEVA+ ANK I+ A++ +F V V KV T R G +RR R EG T + KKAVVTL+ G IE F+G
Sbjct: 2 MESRDIIIRPIVTEKSTDLMADNKYTFEVALRANKTQIKKAIEDIFAVKVIKVNTARVRGKLRRMGR-HEGYTSDWKKAVVTLQEGHHIEVFEG 94
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A522QTT6_9BACT (50S ribosomal protein L23 n=2 Tax=bacterium TaxID=1869227 RepID=A0A522QTT6_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 4.490e-21 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 25 LRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSI----RRKARKDEGVTPETKKAVVTLKAGQQIEFDGRPLFE 327
+R + RD++ P+ITEKS+AN+ +YTF VA AA K IR+AV+ +F VNVTKV T G + RR+AR G + KKA+VTLK GQ+IE G FE
Sbjct: 1 MRIMDARDVVLAPLITEKSMANTMGQQYTFRVASAATKTQIRHAVEDIFKVNVTKVNTTNVKGKMKSFSRRRARPTSGKQSDWKKAIVTLKDGQKIELGGVNFFE 105
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A356BYB2_9FIRM (50S ribosomal protein L23 n=4 Tax=Firmicutes TaxID=1239 RepID=A0A356BYB2_9FIRM) HSP 1 Score: 89.0 bits (219), Expect = 6.490e-21 Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 312
RDI+KRPI+TEKS A+NKYTFEV + ANK+ ++ AV+ +F V V +V T+R G +RR R EG T + KKAVVTLK G IE G
Sbjct: 4 RDILKRPIVTEKSTDLMAENKYTFEVDLRANKMQVKAAVEEIFNVEVEQVNTLRVKGKLRRMGR-HEGYTSDWKKAVVTLKPGHSIEVFG 92
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A3C1QPY1_9FIRM (50S ribosomal protein L23 n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3C1QPY1_9FIRM) HSP 1 Score: 89.0 bits (219), Expect = 6.490e-21 Identity = 53/90 (58.89%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 312
RDIIKRPIITEKS A NKYTFEV + A K I+ AV+ +FGV V KV T R G +RR R EG T + KKAVVTLK G IE G
Sbjct: 4 RDIIKRPIITEKSTDLMAQNKYTFEVDMRATKPQIKAAVEEIFGVKVEKVNTARIRGKLRRMGR-HEGYTSDWKKAVVTLKPGHSIEVFG 92
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A7C6IPK4_9CLOT (50S ribosomal protein L23 n=1 Tax=Natronincola sp. TaxID=2699832 RepID=A0A7C6IPK4_9CLOT) HSP 1 Score: 88.6 bits (218), Expect = 9.200e-21 Identity = 52/90 (57.78%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIEFDG 312
RDIIK+PI+TEKS ADNKYTFEV + A+KI I+ AV+ +F V V KV T R G +RR R EG T KKAVVTLK G IE G
Sbjct: 4 RDIIKKPIVTEKSTDLMADNKYTFEVDLRASKIQIKLAVEEIFDVKVQKVNTSRVKGKLRRMGR-HEGYTSNWKKAVVTLKPGHSIEVFG 92
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A1V5BMP5_9FIRM (50S ribosomal protein L23 n=2 Tax=unclassified Pelotomaculum TaxID=2621639 RepID=A0A1V5BMP5_9FIRM) HSP 1 Score: 87.8 bits (216), Expect = 1.900e-20 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 312
RDI+++P++TEKS + DNKYTF V + ANK+ IR AV+ +F V V KV T+R G I+R R+ G TP+TKKA+VTLK G +IE F+G
Sbjct: 5 RDILRKPLVTEKSTSLLKDNKYTFMVDLKANKVEIRQAVEDLFKVKVEKVNTMRVKGRIKR-VRRIPGKTPDTKKAIVTLKKGDRIEIFEG 94
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: R4KHC1_9FIRM (50S ribosomal protein L23 n=3 Tax=Desulfallaceae TaxID=2867375 RepID=R4KHC1_9FIRM) HSP 1 Score: 87.4 bits (215), Expect = 2.700e-20 Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 312
RDIIK+P++TEKS+ +NKYTF V + ANKI IR AV+ +F V V KV T+R G ++R R G TP+ KKA+VTLK GQ+I+ F+G
Sbjct: 5 RDIIKKPVVTEKSMGLVEENKYTFIVDMGANKIEIRQAVEELFNVKVDKVRTMRVKGKLKR-VRNRWGKTPDRKKAIVTLKEGQKIQLFEG 94
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Match: A0A0F2PTV8_9FIRM (50S ribosomal protein L23 n=2 Tax=Peptococcaceae TaxID=186807 RepID=A0A0F2PTV8_9FIRM) HSP 1 Score: 87.0 bits (214), Expect = 3.830e-20 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 43 RDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRNAVQRVFGVNVTKVTTVRQMGSIRRKARKDEGVTPETKKAVVTLKAGQQIE-FDG 312
RDI+KRP++TEKS+A A+NK+TF V + ANK+ I+ AV+ +F V V KV T+R G +RR R G TP+ KKA+VTLK G +IE F+G
Sbjct: 5 RDILKRPVVTEKSMALQAENKFTFIVDLKANKVEIKKAVEELFKVKVKKVHTMRYKGKLRR-VRNVLGRTPDYKKAIVTLKEGDKIELFEG 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16142.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16142.1.1 >prot_P-wetherbeei_contig16142.1.1 ID=prot_P-wetherbeei_contig16142.1.1|Name=mRNA_P-wetherbeei_contig16142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp KVVSSVADLRSLTDRDIIKRPIITEKSIANSADNKYTFEVAVAANKIMIRback to top mRNA from alignment at P-wetherbeei_contig16142:93..425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16142.1.1 ID=mRNA_P-wetherbeei_contig16142.1.1|Name=mRNA_P-wetherbeei_contig16142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig16142:93..425+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16142:93..425+ >mRNA_P-wetherbeei_contig16142.1.1 ID=mRNA_P-wetherbeei_contig16142.1.1|Name=mRNA_P-wetherbeei_contig16142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig16142:93..425+ (Phaeothamnion wetherbeei SAG_119_79)back to top |