prot_P-wetherbeei_contig16012.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16012.1.1
Unique Nameprot_P-wetherbeei_contig16012.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length196
Homology
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A6I2YRG7_9ACTN (3-isopropylmalate dehydratase small subunit n=4 Tax=root TaxID=1 RepID=A0A6I2YRG7_9ACTN)

HSP 1 Score: 343 bits (879), Expect = 1.530e-118
Identity = 161/193 (83.42%), Postives = 181/193 (93.78%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +KAVRV++G+G+PL+RSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDR+FV+NDERYAGAS+LVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVL EP+V K+W  IEADP+T ITVDMERLLVEVP+AG+ E FPMDT TQER+L GLDD+GIT++H  DI+ YE+KRPAWL
Sbjct:    1 MKAVRVVTGSGMPLRRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRNFVMNDERYAGASVLVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLAEPIVEKIWQAIEADPKTPITVDMERLLVEVPAAGITESFPMDTPTQERFLHGLDDIGITMSHVDDITTYEAKRPAWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A7K1B3J9_9ACTN (3-isopropylmalate dehydratase small subunit n=2 Tax=root TaxID=1 RepID=A0A7K1B3J9_9ACTN)

HSP 1 Score: 342 bits (876), Expect = 4.370e-118
Identity = 164/193 (84.97%), Postives = 176/193 (91.19%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +KAVR++SG GVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTW+DDRDFVLNDERY GASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVL +  VT+LW +IE DPQTEI VDMERL+VEVPSAGL EPFPMD ATQ R+L GLDD+GITLTHA  I  YE+ RP+WL
Sbjct:    1 MKAVRIVSGRGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWRDDRDFVLNDERYQGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLSDAAVTRLWGIIETDPQTEIVVDMERLVVEVPSAGLSEPFPMDPATQHRFLNGLDDIGITLTHADAIDRYETTRPSWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A4R7I0G0_9ACTN (3-isopropylmalate dehydratase small subunit n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I0G0_9ACTN)

HSP 1 Score: 336 bits (862), Expect = 5.740e-116
Identity = 160/193 (82.90%), Postives = 175/193 (90.67%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +KAVR++SGTGVPLKRSDVDTDQIIPA+WLKRVERTGFEKGLFSTW+DDRDFVLN E+Y GASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPE  V  +WA IE+DP TEITVDMERL VEVPSAG+ E FPMD  TQ R+L GLDD+GITL+HA  I +YE++RPAWL
Sbjct:    1 MKAVRIVSGTGVPLKRSDVDTDQIIPADWLKRVERTGFEKGLFSTWRDDRDFVLNQEQYQGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPESTVEAIWAAIESDPSTEITVDMERLTVEVPSAGITETFPMDAPTQHRFLEGLDDIGITLSHATAIDEYETQRPAWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A848UGI8_9ACTN (3-isopropylmalate dehydratase small subunit n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UGI8_9ACTN)

HSP 1 Score: 327 bits (839), Expect = 1.900e-112
Identity = 155/193 (80.31%), Postives = 173/193 (89.64%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +KAVR++SGTGVPLKRSDVDTDQIIPA+WLKRVERTGFEKGLFSTW+DDR+FV+N E Y GASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVL E  V  +WA IE DP TEITVD+ERL+VEVP+AG+ E FPMD  TQ RYL GLDD+ +TLTHA  I+DYE++RPAW+
Sbjct:    1 MKAVRIVSGTGVPLKRSDVDTDQIIPADWLKRVERTGFEKGLFSTWRDDREFVMNQEEYQGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLAEATVEAIWAAIERDPSTEITVDVERLVVEVPAAGISESFPMDEPTQHRYLEGLDDIALTLTHADAITDYEARRPAWM 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A3C2B4P9_9ACTN (3-isopropylmalate dehydratase small subunit n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4P9_9ACTN)

HSP 1 Score: 326 bits (836), Expect = 5.450e-112
Identity = 157/194 (80.93%), Postives = 172/194 (88.66%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWLP 194
            +KAVR++SG GVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTW+DDR+FVLNDERY GASILVAGP+FGVGSSREHAVWAIQQ GFDAVIAPSFSDIFRNNCTKNGLVPVV    VV  +WA IEADP TEITVDMERL +EVP+AG+ E FP+D  TQ R+L GLDD+GITLTHA+ I  YES RP+WLP
Sbjct:    1 MKAVRIISGRGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWRDDRNFVLNDERYVGASILVAGPSFGVGSSREHAVWAIQQYGFDAVIAPSFSDIFRNNCTKNGLVPVVASLGVVEAIWAAIEADPATEITVDMERLSLEVPAAGITESFPIDPQTQHRFLNGLDDIGITLTHASAIDSYESTRPSWLP 194          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A7W1HJK2_9ACTN (3-isopropylmalate dehydratase small subunit n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HJK2_9ACTN)

HSP 1 Score: 324 bits (830), Expect = 6.130e-111
Identity = 149/193 (77.20%), Postives = 175/193 (90.67%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            ++AV ++ G G+PL+RSDVDTDQIIPAEWLKRVERTGFE+GLF+TW+DDRDFVLNDERYAGA ++VAGPAFGVGSSREHAVWAIQQ GFDAVIAPSFSDIFRNNCTKNGLVPVVLPE VV ++WA IEADP  E+ VD+ER LVEVP+AG+ EPFPMD AT++RYL GLDDVG+T++HAA I  +E++RP+WL
Sbjct:    1 MRAVHIVQGGGLPLRRSDVDTDQIIPAEWLKRVERTGFEQGLFATWRDDRDFVLNDERYAGAKVIVAGPAFGVGSSREHAVWAIQQSGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEAVVERIWAAIEADPHVELVVDVERRLVEVPAAGITEPFPMDDATRQRYLDGLDDVGLTMSHAAAIDAFEAQRPSWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A7X9Q0I4_9ACTN (3-isopropylmalate dehydratase small subunit n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9Q0I4_9ACTN)

HSP 1 Score: 323 bits (828), Expect = 9.030e-111
Identity = 153/194 (78.87%), Postives = 173/194 (89.18%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWLP 194
            ++AV +++G GVPL+RSDVDTDQIIPAEWLKRVERTGFEKGLF+TW+DDR+FVLNDERYAGAS+LVAGP+FGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVV+PE VV  +WA IEAD   EIT+D+ERL VEVP+AG+   FPMD  TQ RYL GLDDVGITL HA DI+ +E+ RPAWLP
Sbjct:    1 MRAVHIITGRGVPLQRSDVDTDQIIPAEWLKRVERTGFEKGLFATWRDDRNFVLNDERYAGASVLVAGPSFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVVPEAVVHAIWAAIEADHLVEITIDVERLTVEVPAAGITASFPMDPQTQHRYLNGLDDVGITLGHADDITAFEAARPAWLP 194          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A6I3DDI2_9ACTN (3-isopropylmalate dehydratase small subunit n=2 Tax=root TaxID=1 RepID=A0A6I3DDI2_9ACTN)

HSP 1 Score: 323 bits (827), Expect = 1.280e-110
Identity = 153/193 (79.27%), Postives = 171/193 (88.60%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +K+V+VL+G GVPLKRSDVDTDQIIPA+WLKRVERTGFE GLFSTW+DDR+FVLNDERY+GASILVAGP+FGVGSSREHAVWAIQQ GFDAVIAPSFSDIFRNNCTKNGL PV+LP+  V KLW LIEAD  TEI VDME+LLVEVPSAG  E FPMD  TQ R+L GLDD+GIT+THAA+I  +E  RP+WL
Sbjct:    1 MKSVQVLTGRGVPLKRSDVDTDQIIPADWLKRVERTGFEAGLFSTWRDDRNFVLNDERYSGASILVAGPSFGVGSSREHAVWAIQQYGFDAVIAPSFSDIFRNNCTKNGLAPVILPQAAVEKLWELIEADANTEIVVDMEKLLVEVPSAGFKESFPMDAPTQHRFLNGLDDIGITMTHAAEIDSFEKTRPSWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: UPI000E351EDC (3-isopropylmalate dehydratase small subunit n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E351EDC)

HSP 1 Score: 323 bits (827), Expect = 1.420e-110
Identity = 150/193 (77.72%), Postives = 173/193 (89.64%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWL 193
            +KAV V+SG+G+PL+RSDVDTDQIIPAEWLKR+ERTGFEKGLF+TW+DDRDFVLNDER+AGAS+LVAGPAFGVGSSREHAVWAIQQ GFDAVIAPS+SDIFRNNCTKNGLVPVVLPE  V ++W  IE+DPQT I VD+ERL+VEVP+ GLVE FP+D  TQ R++ GLDD+G+TL HA DI  YE+ RPAWL
Sbjct:    1 MKAVSVISGSGLPLRRSDVDTDQIIPAEWLKRIERTGFEKGLFATWRDDRDFVLNDERFAGASVLVAGPAFGVGSSREHAVWAIQQYGFDAVIAPSYSDIFRNNCTKNGLVPVVLPEAAVERIWQAIESDPQTTIVVDVERLVVEVPAIGLVESFPLDPLTQHRFVNGLDDIGLTLAHADDIDSYEATRPAWL 193          
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Match: A0A7K1CRI5_9ACTN (3-isopropylmalate dehydratase small subunit n=2 Tax=root TaxID=1 RepID=A0A7K1CRI5_9ACTN)

HSP 1 Score: 321 bits (822), Expect = 7.670e-110
Identity = 155/195 (79.49%), Postives = 168/195 (86.15%), Query Frame = 0
Query:    1 VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDRDFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDIFRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAGLVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWLPR 195
            +K+VR+L+G GVPLKRSDVDTDQIIPAEWLKRVERTGFE GLFSTW+DDR FVLNDER+AGASILVAG +FGVGSSREHAVWAIQQ GFDAVIAPSFSDIFRNNCTKNGL PVVL +  V KLW +IE+ P TEITVDMERLLVEVPS G  E FPMD  TQ R+L GLDD+GITLTHA  I D+E  RPAWL R
Sbjct:    1 MKSVRILTGRGVPLKRSDVDTDQIIPAEWLKRVERTGFEAGLFSTWRDDRSFVLNDERFAGASILVAGASFGVGSSREHAVWAIQQYGFDAVIAPSFSDIFRNNCTKNGLAPVVLSQAAVEKLWDVIESHPDTEITVDMERLLVEVPSIGFTESFPMDPPTQHRFLNGLDDIGITLTHATKIDDFEKSRPAWLVR 195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16012.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I2YRG7_9ACTN1.530e-11883.423-isopropylmalate dehydratase small subunit n=4 Ta... [more]
A0A7K1B3J9_9ACTN4.370e-11884.973-isopropylmalate dehydratase small subunit n=2 Ta... [more]
A0A4R7I0G0_9ACTN5.740e-11682.903-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A848UGI8_9ACTN1.900e-11280.313-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A3C2B4P9_9ACTN5.450e-11280.933-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A7W1HJK2_9ACTN6.130e-11177.203-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A7X9Q0I4_9ACTN9.030e-11178.873-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A6I3DDI2_9ACTN1.280e-11079.273-isopropylmalate dehydratase small subunit n=2 Ta... [more]
UPI000E351EDC1.420e-11077.723-isopropylmalate dehydratase small subunit n=1 Ta... [more]
A0A7K1CRI5_9ACTN7.670e-11079.493-isopropylmalate dehydratase small subunit n=2 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015928Aconitase/3-isopropylmalate dehydratase, swivelGENE3D3.20.19.10Aconitase, domain 4coord: 1..174
e-value: 1.9E-56
score: 192.5
IPR000573Aconitase A/isopropylmalate dehydratase small subunit, swivel domainPFAMPF00694Aconitase_Ccoord: 6..117
e-value: 2.6E-26
score: 92.5
IPR0044313-isopropylmalate dehydratase, small subunitTIGRFAMTIGR00171TIGR00171coord: 4..181
e-value: 1.4E-50
score: 169.7
IPR0044313-isopropylmalate dehydratase, small subunitHAMAPMF_01031LeuD_type1coord: 1..193
score: 35.793137
NoneNo IPR availablePANTHERPTHR43345:SF53-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNITcoord: 3..190
NoneNo IPR availablePANTHERPTHR433453-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATEDcoord: 3..190
NoneNo IPR availableSUPERFAMILY52016LeuD/IlvD-likecoord: 5..189
IPR0339403-isopropylmalate dehydratase, swivel domainCDDcd01577IPMI_Swivelcoord: 14..139
e-value: 2.94546E-32
score: 109.986

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16012contigP-wetherbeei_contig16012:390..977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16012.1.1mRNA_P-wetherbeei_contig16012.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16012 390..977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16012.1.1 ID=prot_P-wetherbeei_contig16012.1.1|Name=mRNA_P-wetherbeei_contig16012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
VKAVRVLSGTGVPLKRSDVDTDQIIPAEWLKRVERTGFEKGLFSTWKDDR
DFVLNDERYAGASILVAGPAFGVGSSREHAVWAIQQGGFDAVIAPSFSDI
FRNNCTKNGLVPVVLPEPVVTKLWALIEADPQTEITVDMERLLVEVPSAG
LVEPFPMDTATQERYLGGLDDVGITLTHAADISDYESKRPAWLPR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015928Aconitase/3IPM_dehydase_swvl
IPR000573AconitaseA/IPMdHydase_ssu_swvl
IPR0044313-IsopropMal_deHydase_ssu
IPR033940IPMI_Swivel