prot_P-wetherbeei_contig159.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig159.3.1
Unique Nameprot_P-wetherbeei_contig159.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length200
Homology
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BLAST of mRNA_P-wetherbeei_contig159.3.1 vs. uniprot
Match: A0A835YUT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.210e-35
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 0 
Query:    3 ESEAIAYFEAKLRVAPYNFRLHRNLAPLVLARGEVNRALRHYRSAIDLNPADADSRNDLAALLFSLGKWQPALAALKQVWEKCLHQLRQLCFKAARLKTSHEQRTYSCDIKKRMNFPCQVLELNPSHAQAHANLTALYFSRGDIGLARRHAHEAAAFRPLDPAAHRNLARVLDATGNTPEAIRSNKVAIRRGPG 196
            ++E + YF  KLR AP N   HRNLAPL+++ G++ +A+ HYR AI+LNPAD  S+ND+   L+ LGKW+ ALAA  QV  +                                          P    AH N++A+YF RG +  A +HA +A    P+D  AHRNLA+VLDATG++  A+   ++A+ RGPG
Sbjct:   19 QAEGLKYFRHKLRQAPDNASYHRNLAPLLVSEGQLTKAIHHYRRAIELNPADCSSKNDIGVCLWQLGKWEAALAAFVQVTRE-----------------------------------------RPDFTAAHVNMSAVYFGRGMLVQALQHARQAVHLAPMDARAHRNLAKVLDATGDSTCAMAHRQIAVLRGPG 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig159.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YUT1_9STRA1.210e-3538.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 164..197
e-value: 230.0
score: 3.1
coord: 55..88
e-value: 100.0
score: 6.2
coord: 130..163
e-value: 31.0
score: 10.7
coord: 21..54
e-value: 4.2
score: 16.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 21..54
score: 9.6764
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..88
e-value: 2.0E-14
score: 55.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 120..200
e-value: 1.1E-12
score: 49.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..197
NoneNo IPR availablePFAMPF13432TPR_16coord: 139..198
e-value: 1.4E-4
score: 22.4
NoneNo IPR availablePFAMPF14559TPR_19coord: 32..83
e-value: 2.7E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR45586TPR REPEAT-CONTAINING PROTEIN PA4667coord: 4..81
coord: 122..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig159contigP-wetherbeei_contig159:2965..3564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig159.3.1mRNA_P-wetherbeei_contig159.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig159 2965..3564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig159.3.1 ID=prot_P-wetherbeei_contig159.3.1|Name=mRNA_P-wetherbeei_contig159.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
MNESEAIAYFEAKLRVAPYNFRLHRNLAPLVLARGEVNRALRHYRSAIDL
NPADADSRNDLAALLFSLGKWQPALAALKQVWEKCLHQLRQLCFKAARLK
TSHEQRTYSCDIKKRMNFPCQVLELNPSHAQAHANLTALYFSRGDIGLAR
RHAHEAAAFRPLDPAAHRNLARVLDATGNTPEAIRSNKVAIRRGPGAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf