prot_P-wetherbeei_contig15867.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15867.2.1
Unique Nameprot_P-wetherbeei_contig15867.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length193
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig15867.2.1 vs. uniprot
Match: A0A7C1GEZ9_9DELT (Type II secretion system protein GspC n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1GEZ9_9DELT)

HSP 1 Score: 55.8 bits (133), Expect = 6.090e-6
Identity = 47/188 (25.00%), Postives = 84/188 (44.68%), Query Frame = 0 
Query:   33 LRGTMVGTT--TSAVLEYQGMTRVLKEGDAIGPFRVGGIYPKKASVAGEGHKYFLALTPQQPATAAAAGTAPRRESGTA-------------------------QWVNGLTVTQVVREGSPIGLLIHNQGAPLPINSQEGPLSQYGVYDSDVVKTVNGRPLRAQEDLWWLHEELLHSPSLEIAMERGG 193
            L+GT+ G    + A++E +   +  K G+ +   ++  IY  K  +   G +  L +  ++P ++  A +APRR    A                         Q++    V    REG P G  + N        + E  + + GV   D++K+VNG P+R  ED + +++EL +  S+E+ +ER G
Sbjct:   99 LKGTITGPKEISRAIIEEKNEQKSYKIGENVKGAKILAIYRNKVIMDVNGQEQMLIV--EEPRSSLQA-SAPRRREARAPTRPAVPEQREERPSGMTDIMRNLDQYIGKARVVPYFREGEPYGFRVSNV-------TDEALIYELGVRSGDIIKSVNGIPVRTPEDAFLMYQELQNESSVELELERQG 276
[Close]
BLAST of mRNA_P-wetherbeei_contig15867.2.1 vs. uniprot
Match: A0A832JKX3_9BACT (Uncharacterized protein n=1 Tax=Synergistales bacterium TaxID=2268201 RepID=A0A832JKX3_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 7.860e-5
Identity = 24/82 (29.27%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:  112 VNGLTVTQVVREGSPIGLLIHNQGAPLPINSQEGPLSQYGVYDSDVVKTVNGRPLRAQEDLWWLHEELLHSPSLEIAMERGG 193
            ++ + +T  +++G+P+G  + +         ++  L+Q GV + DV+K++NG P+R   D+    + L++SPS+ + +ERGG
Sbjct:  235 MSAVRITPYLKDGNPVGFQVRHL-------KRDNLLAQLGVRNGDVIKSINGIPIRNVGDVMNTIQSLMNSPSISVEVERGG 309
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15867.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7C1GEZ9_9DELT6.090e-625.00Type II secretion system protein GspC n=1 Tax=Delt... [more]
A0A832JKX3_9BACT7.860e-529.27Uncharacterized protein n=1 Tax=Synergistales bact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15867contigP-wetherbeei_contig15867:980..1558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15867.2.1mRNA_P-wetherbeei_contig15867.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15867 980..1558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15867.2.1 ID=prot_P-wetherbeei_contig15867.2.1|Name=mRNA_P-wetherbeei_contig15867.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp
MVASPRPEVSQTPEAPVPSPTPHAEVQPELPILRGTMVGTTTSAVLEYQG
MTRVLKEGDAIGPFRVGGIYPKKASVAGEGHKYFLALTPQQPATAAAAGT
APRRESGTAQWVNGLTVTQVVREGSPIGLLIHNQGAPLPINSQEGPLSQY
GVYDSDVVKTVNGRPLRAQEDLWWLHEELLHSPSLEIAMERGG
back to top