prot_P-wetherbeei_contig15769.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15769.1.1
Unique Nameprot_P-wetherbeei_contig15769.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length248
Homology
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BLAST of mRNA_P-wetherbeei_contig15769.1.1 vs. uniprot
Match: B4KE71_DROMO (Endonuclease III homolog n=4 Tax=mojavensis species complex TaxID=198037 RepID=B4KE71_DROMO)

HSP 1 Score: 55.1 bits (131), Expect = 3.270e-5
Identity = 33/113 (29.20%), Postives = 64/113 (56.64%), Query Frame = 0 
Query:  117 KMADPDADFETRRFHLFVGVLLSSRCRYEVVRTAVAKLRRREGGLTMEAVSSWSADEAAALVSTVHYNKAKGQNLVESAQAIRSRHSGCVPRQEMELRALPGIGAALAKLFVA 229
            K AD +A+ +T+RFH+ VG++LSS+ + E    A+ +L+ +   LT   +     +E   L+  V + K K + L ++++ +  +++  +P    EL  LPG+G  +A + +A
Sbjct:  154 KCADANANEKTQRFHILVGLILSSQTKDETTFEAMNRLKAQT--LTPARLKDLPVEELERLLHPVSFYKNKAKYLKQTSEILVDKYNEDIPNNIKELLKLPGVGPKMAHICMA 264
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BLAST of mRNA_P-wetherbeei_contig15769.1.1 vs. uniprot
Match: A0A6J1LTB1_DROHY (Endonuclease III homolog n=1 Tax=Drosophila hydei TaxID=7224 RepID=A0A6J1LTB1_DROHY)

HSP 1 Score: 53.9 bits (128), Expect = 8.020e-5
Identity = 33/113 (29.20%), Postives = 62/113 (54.87%), Query Frame = 0 
Query:  117 KMADPDADFETRRFHLFVGVLLSSRCRYEVVRTAVAKLRRREGGLTMEAVSSWSADEAAALVSTVHYNKAKGQNLVESAQAIRSRHSGCVPRQEMELRALPGIGAALAKLFVA 229
            K AD  A+ +T+RFH+ VG++LSS+ + E    A+ +L+ +   LT   +      E   L+  V + K K + L ++++ +  +++  +P    EL  LPG+G  +A + +A
Sbjct:  157 KCADASANEKTQRFHILVGLMLSSQTKDETTFEAMKRLKAQT--LTPARIKDLPVAELERLLHPVSFYKNKAKYLKQTSEILVDQYNEDIPNNIKELLKLPGVGPKMAHICMA 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15769.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
B4KE71_DROMO3.270e-529.20Endonuclease III homolog n=4 Tax=mojavensis specie... [more]
A0A6J1LTB1_DROHY8.020e-529.20Endonuclease III homolog n=1 Tax=Drosophila hydei ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 113..231
e-value: 4.3E-16
score: 61.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..50
NoneNo IPR availablePANTHERPTHR43286ENDONUCLEASE III-LIKE PROTEIN 1coord: 118..230
NoneNo IPR availablePANTHERPTHR43286:SF1ENDONUCLEASE III-LIKE PROTEIN 1coord: 118..230
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 134..246
e-value: 2.5E-6
score: 27.9
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 128..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15769contigP-wetherbeei_contig15769:249..1561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15769.1.1mRNA_P-wetherbeei_contig15769.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15769 234..1578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15769.1.1 ID=prot_P-wetherbeei_contig15769.1.1|Name=mRNA_P-wetherbeei_contig15769.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
MSVGEGASSSARQGSQSESEEKGEGAWREGGSNATASLQEDSNASSAHEA
TETIDLDGATYVDDCKETRQESNANSTLPREGNGGDSGASSGGAALLRSV
GEPGGVVLCNLASKWLKMADPDADFETRRFHLFVGVLLSSRCRYEVVRTA
VAKLRRREGGLTMEAVSSWSADEAAALVSTVHYNKAKGQNLVESAQAIRS
RHSGCVPRQEMELRALPGIGAALAKLFVAVDGYATKYYGRAQGWSKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003265HhH-GPD_domain
IPR011257DNA_glycosylase