prot_P-wetherbeei_contig15718.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15718.1.1
Unique Nameprot_P-wetherbeei_contig15718.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length207
Homology
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BLAST of mRNA_P-wetherbeei_contig15718.1.1 vs. uniprot
Match: A0A7C2LMH2_9HYPH (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LMH2_9HYPH)

HSP 1 Score: 115 bits (289), Expect = 1.860e-26
Identity = 104/182 (57.14%), Postives = 124/182 (68.13%), Query Frame = 0 
Query:   26 LKGLQEISANFYKSGSYLQALEFAEKALVLTIREFGPDHEKAGIQTYSLGLIAEAAGRLDDAERHYRESARIRDKVYGVDSAGTAQALEKLGGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIALRNYPAALGYYREAVRLLTTQRPAQTIAKSVVDDEIRRNRAAF 207
            L+ L E S  +Y+SG Y +AL  AE+AL L +R +G DHE+ G+  YSLGL AE AG L  AER+YRE+ R+R+KVYGVD    A+ALEKLGG+ +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  RLLT Q  +QT+ KS+V+DEIRR R  F
Sbjct:   36 LQRLVESSHAYYRSGDYARALAVAEEALPLVLRTWGSDHERTGLHYYSLGLTAEMAGNLAAAERYYRETVRVREKVYGVDGPSVAEALEKLGGIHVKQGRPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLTAQDTSQTVVKSIVEDEIRRYRDTF 217
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BLAST of mRNA_P-wetherbeei_contig15718.1.1 vs. uniprot
Match: A0A6N6T529_9HYPH (CHAT domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T529_9HYPH)

HSP 1 Score: 112 bits (280), Expect = 4.160e-25
Identity = 107/190 (56.32%), Postives = 135/190 (71.05%), Query Frame = 0 
Query:   18 LSTEPSEALKGLQEISANFYKSGSYLQALEFAEKALVLTIREFGPDHEKAGIQTYSLGLIAEAAGRLDDAERHYRESARIRDKVYGVDSAGTAQALEKLGGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIALRNYPAALGYYREAVRLLTTQRPAQTIAKSVVDDEIRRNRAAF 207
            L+ +PS  L+ LQ+ + +FYK+G++ +AL+FAE+AL L IRE+GP+HE+  IQ YSLGLI+EAAG LD A R+Y E  RIR+KV                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ++  AL  YREAVRLLT Q  +  + KS+V+++I+R+R  F
Sbjct:   31 LAQQPSRELQNLQDATRDFYKAGAHAEALQFAERALPLVIREYGPEHEQTSIQHYSLGLISEAAGNLDAAGRYYAECLRIREKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWAEALASYREAVRLLTGQDTSHVVVKSIVEEDIKRHRDTF 220
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BLAST of mRNA_P-wetherbeei_contig15718.1.1 vs. uniprot
Match: A0A537RDA6_9PROT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RDA6_9PROT)

HSP 1 Score: 75.5 bits (184), Expect = 2.300e-12
Identity = 89/145 (61.38%), Postives = 105/145 (72.41%), Query Frame = 0 
Query:   63 DHEKAGIQTYSLGLIAEAAGRLDDAERHYRESARIRDKVYGVDSAGTAQALEKLGGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIALRNYPAALGYYREAVRLLTTQRPAQTIAKSVVDDEIRRNRAAF 207
            +HE+  +Q  SLGL+AE AG L  A+++Y ES RIR+KVYG +SAG AQALE       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               +A+RL+T Q  +QTI KS+V+DEIRR+R  F
Sbjct:    1 EHEQTLVQYTSLGLVAEKAGNLVAAQKYYAESVRIREKVYGPESAGVAQALESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAIRLMTGQDTSQTIVKSIVEDEIRRSRDTF 145
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15718.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7C2LMH2_9HYPH1.860e-2657.14Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A6N6T529_9HYPH4.160e-2556.32CHAT domain-containing protein n=1 Tax=Hyphomicrob... [more]
A0A537RDA6_9PROT2.300e-1261.38Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 110..143
e-value: 8.8
score: 15.3
coord: 68..101
e-value: 20.0
score: 12.4
coord: 152..185
e-value: 10.0
score: 14.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 152..185
score: 8.0834
NoneNo IPR availablePFAMPF13424TPR_12coord: 71..140
e-value: 1.0E-14
score: 54.5
NoneNo IPR availablePANTHERPTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)coord: 25..182
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 9..198
e-value: 1.9E-32
score: 114.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15718contigP-wetherbeei_contig15718:247..867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15718.1.1mRNA_P-wetherbeei_contig15718.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15718 247..867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15718.1.1 ID=prot_P-wetherbeei_contig15718.1.1|Name=mRNA_P-wetherbeei_contig15718.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp
LTLATGLTPAARAQTQPLSTEPSEALKGLQEISANFYKSGSYLQALEFAE
KALVLTIREFGPDHEKAGIQTYSLGLIAEAAGRLDDAERHYRESARIRDK
VYGVDSAGTAQALEKLGGVLLRAGKTAAAEALFQRVLKIRGDLVGNQHAF
TASARADLGAVNIALRNYPAALGYYREAVRLLTTQRPAQTIAKSVVDDEI
RRNRAAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf