prot_P-wetherbeei_contig1564.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1564.2.1
Unique Nameprot_P-wetherbeei_contig1564.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length321
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1564.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028083Spt6 acidic, N-terminal domainPFAMPF14632SPT6_acidiccoord: 182..254
e-value: 1.4E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1564contigP-wetherbeei_contig1564:2816..3876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1564.2.1mRNA_P-wetherbeei_contig1564.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1564 2816..4078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1564.2.1 ID=prot_P-wetherbeei_contig1564.2.1|Name=mRNA_P-wetherbeei_contig1564.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MSDSDSDAAGPADSKARTRTVAPDSDSDGTDGATALSPAGRAAAGNGKGK
AARGGKSAVSDDSDNGGGSGDGGGGNAGSSRGADGDDDDASNKAGSGDDG
GGGGGGGGGGGSGAESSSEEEGEVMEEGSDDDGGSASRRKKTKKKRPVGS
GNSDRNKVNRKRSRAARAYVDEMAVDEDAEGDGDDDDEEGDENDDYEYDD
FVVQAADDGDGEGGADKRRERKKKRSRLVKARGATQLDEEDLALIAENAG
KDLREGVGGQQRGPQHPRRHVEEHDFDSDDDDGFIVDDDVGYARDSGGRR
GGRAPSEFDDGGPTQAQMDEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028083Spt6_acidic_N_dom