prot_P-wetherbeei_contig1562.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1562.4.1
Unique Nameprot_P-wetherbeei_contig1562.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length315
Homology
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA)

HSP 1 Score: 382 bits (982), Expect = 2.590e-130
Identity = 189/314 (60.19%), Postives = 245/314 (78.03%), Query Frame = 0
Query:    1 MPS-RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            MP+ RAPKIE++EL+ D+V+F LSDTDTSVANALRR MIAEVPTMAIDLVTIT N+S LQDEFLAHRLGL+PL+  +P  KF+YN DC+CED+C++CSV  SLDVS+     +   +H+KD PV VT+ +L S DPRV P+HF++SD ++   + GIM+AKL++GQR+ LTAVAKKG+AKEHAKWSPV VATY+FDP++++ +DV   L   Q+Q+ VE CP KVY LD RT N  V++  EC+YCD+C  +AS+ K RPEDD VVTV    D F+F VETNG++ A+ VV  AL+ LS KLQ LRNE+++++Q
Sbjct:    1 MPNTRAPKIEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRC-EPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKA-AGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDIIDASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELINVKQ 312          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL)

HSP 1 Score: 316 bits (810), Expect = 3.360e-104
Identity = 155/316 (49.05%), Postives = 221/316 (69.94%), Query Frame = 0
Query:    1 MPS-RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPL----QITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHL 311
            MP+ R PKIE++ELRDD+++F LS+TD SVANA+RR MIAEVPT+AIDLVTI  NTSV+ DEFLAHRLG+IPL     + + + +F+Y+ DC+C++HC  CSVEF+LDV  +  +            + VT+++L+S+DP + P+HFS+ +      + G++IAKL  GQRI L+A+AK G+ KEHAKWSPVAVAT+ ++P++ +N+ VM  L+  QK E  + CP +VY  D       V DA  C+YCD+CV +A++FK  PEDD  +T+R R+D F+F VET G +  E VV  AL ++ EKL +L+++ + L
Sbjct:    1 MPNPRFPKIEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDVVADQGV------------LTVTSESLRSTDPYIRPMHFSSEEEFSNTQDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQCLEL 304          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.910e-101
Identity = 154/318 (48.43%), Postives = 215/318 (67.61%), Query Frame = 0
Query:    1 MPS-RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDP----KVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            MP+ R PKI++ E+RDD+++F LS+TDTSVANA+RR MIAEVPT+AIDLV+I  NTSV+ DEFLAHRLG+IPL++       K +F+Y+ DC+C++HC  CSVEF LDV       S  Q         VT+ +L+S DP + P+HFS+ +      + G++IAKL  GQR+ L A+AK G+ KEHAKWSPVAVATY F+P++ +N++V+      Q+ E  + CPT+V+ +D       V+D   C+YCD+CV LAS+++  PEDD  VTV    D F+F VET G +  E VV  AL ++ +KL AL+++ + L Q
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDVRAE----SGTQT--------VTSDSLRSLDPYIKPVHFSSEEEANNTQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQ 306          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA)

HSP 1 Score: 309 bits (792), Expect = 3.340e-101
Identity = 153/312 (49.04%), Postives = 215/312 (68.91%), Query Frame = 0
Query:    3 SRAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDPKV-KFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            +R PK+++ ELRDD + F LSDTD SVANALRR MIAE PT+AIDLVTI TNTSV+QDEFLAHRLGLIP++     V KF +N+DC+CED+C +C+V FSLDVS+ D   +   +H+ D P+ VT+Q+L S++P V  +HF+++D  +   + GI + KLA+GQ I LTA+AK G  KEH+KW    VATY++DP++++NE+ +  L+  Q  +  E CP  V+ +D +TG   V +  +C+YC++C  L    K R EDDP + +    + FLF VETNG++ AE VV  AL VL  KL+ L+   M +++
Sbjct:    5 TRFPKVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSF-DQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQSQDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKLRDLQMACMEIKE 315          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD)

HSP 1 Score: 306 bits (785), Expect = 2.130e-100
Identity = 153/318 (48.11%), Postives = 217/318 (68.24%), Query Frame = 0
Query:    1 MPS-RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQ----ITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            MP+ R PKIEI ELRDD+++F LS+TD SVANA+RR MI+EVPT+AIDLV+I  NTSV+ DEFLAHRLG+IPL     + + + +F+Y+ DC+C++HC  CSVEF LDV  +  +            + VT++ LKS DP + P++FS+ + +    + G++IAKL  GQR+ L+A+AK G+ KEHAKWSPVAVAT+ ++P++ +N+ V+      QK E  + CPT+VY  D       V D+  C+YCD+CV +A +FK  PEDD  V+VR R+D F+F VET G +  E VV  AL ++ EKL +L+++ + L Q
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVRADQGV------------MTVTSEALKSLDPYIRPVNFSSEEELNNTQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQCLELSQ 306          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC)

HSP 1 Score: 305 bits (780), Expect = 1.260e-99
Identity = 151/314 (48.09%), Postives = 209/314 (66.56%), Query Frame = 0
Query:    4 RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDP----KVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            R PKI+I ELRDD+++F LS+TDTSVAN++RR MIAEVPT+AIDLV+I  NTSV+ DEFLAHRLG+IPL         K +F+Y+ DC+C++HC  CSVEF LDV     + +            VT+Q+L+S DP V P+HFS+ + +    + G++IAKL  GQR+ L A+AK G+ KEHAKWSPVAVATY F+P++ +N+ V+      Q+ E  + CPT+V+ +D       V+D   C+YCD+CV LA ++   PEDD  VTV    D F+F VET G +  E VV  AL ++ +KL +L+++ + L Q
Sbjct:    5 RFPKIDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDVRAESGMQT------------VTSQSLRSLDPYVHPVHFSSEEELNNTQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQ 306          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC)

HSP 1 Score: 310 bits (794), Expect = 1.420e-98
Identity = 154/314 (49.04%), Postives = 216/314 (68.79%), Query Frame = 0
Query:    4 RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQ----ITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            R PKIEI ELRDD++ F LS+TD SVANA+RR MIAEVPT+AIDLV+I  NTSV+ DEFLAHRLG+IPL     + + + +F+Y+ DC+C+++C  CSVEFSLDV+ +  + S            VT++ LKSSDP + P++FS+ + +    + G++IAKL  GQR+ L+A+AK G+ KEHAKWSPVAVATY +DP++ +N+ V+ +    QK E  + CPT+V+  D       V D   C+YCD+CV LA +FK  PEDD  V+++ R+D F+F VET G +  E VV  AL ++ EKL +L+++ + L Q
Sbjct:  249 RFPKIEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGVLS------------VTSEALKSSDPYIRPVNFSSEEELNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 550          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.890e-97
Identity = 153/247 (61.94%), Postives = 192/247 (77.73%), Query Frame = 0
Query:    1 MPS-RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHV--EFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVY 244
            MP+ RAP++EI++LR+D+VEF LS+TDTSVANALRR MIAEVPTMAIDLVTI  N+SVLQDEFL+HRLGLIPL   DP V++ YN+DC+CED+C +CS  F+LDVS+ D       EH +D+PVHVT+ +L SSDPR+  +HF+ SD    +   + GI+IAKLAKGQR+ LTAVAKKG+AKEHAKWSPVAVATYKF+PV+EINE+    L   QK EFVE CP KVY  D ++G  +V+    C++
Sbjct:    1 MPNLRAPQVEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLA-ADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSW-DKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMW 245          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A2P4YFS8_9STRA (DNA-directed RNA polymerase II n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YFS8_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.690e-95
Identity = 155/314 (49.36%), Postives = 220/314 (70.06%), Query Frame = 0
Query:    4 RAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPL----QITDPKVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            R PKIEI ELRDD++ F LS+TD SVANA+RR MI+EVPT+AIDLV+I  NTSV+ DEFLAHRLG+IPL    ++ + + +F+Y+ DC+C+++C  CSVEFSLDV+ ++ + S            VT++ LKSSDP + P++FS+ + +    + G++IAKL  GQR+ L+A+AK G+ KEHAKWSPVAVAT+ +DP++ +N+ V+   +  QK E  +CCPT+V+  D       V DA  C+YCD+CV LA +FK  PEDD  V++R R+D F+F VET G +  E VV  AL ++ EKL +L+++ + L Q
Sbjct:  839 RFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGRLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADNGVLS------------VTSEALKSSDPYIRPVNFSSEEELNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYDPIITLNQAVLSTYSPEQKAELYKCCPTEVFETDENYEQFTVGDAMRCMYCDECVKLADSFKDNPEDDSAVSIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQ 1140          
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA)

HSP 1 Score: 293 bits (751), Expect = 2.880e-95
Identity = 147/312 (47.12%), Postives = 205/312 (65.71%), Query Frame = 0
Query:    6 PKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVTITTNTSVLQDEFLAHRLGLIPLQITDP----KVKFLYNHDCECEDHCQRCSVEFSLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEFQTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEINEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVLLASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEKLQALRNEVMHLRQ 313
            PK+EI++LRDD+++F L +TD SVANALRR MIAEVPT+AIDLVTI  NTSV+ DEFLAHRLG+IPL         + +F+Y+ DC+CE+HC  CSVEF LDV     + S            VT+  LKS DP + P++FS+ +      + G++IAKL  GQ I L+A+AK G+ KEHAKWSPVAVAT+ ++P + +N+ ++      QK E  + CPT+VY  D       + +   C+YCD+CV +A+++K  PEDD  VTV+ ++D F+F VET G +  E VV  AL ++ EKL  L+++ + L Q
Sbjct:    7 PKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVRAEQGMLS------------VTSDALKSVDPYIRPVNFSSEEEFNNTQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLELSQ 306          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1562.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK59_9STRA2.590e-13060.19Putative DNAdirected RNA polymerase II 36 kDa poly... [more]
A0A8K1CE06_PYTOL3.360e-10449.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4FWZ6_9STRA1.910e-10148.43RPOLD domain-containing protein n=8 Tax=Aphanomyce... [more]
A0A7S2Y381_9STRA3.340e-10149.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3W7V5_GLOUD2.130e-10048.11RPOLD domain-containing protein n=21 Tax=Oomycota ... [more]
A0A067CJB5_SAPPC1.260e-9948.09RNA polymerase Rpb3/Rpb11 dimeriZation domain-cont... [more]
A0A484DTY5_BRELC1.420e-9849.04RPOLD domain-containing protein n=1 Tax=Bremia lac... [more]
D7FHB9_ECTSI1.890e-9761.94RPOLD domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A2P4YFS8_9STRA1.690e-9549.36DNA-directed RNA polymerase II n=1 Tax=Phytophthor... [more]
A0A024G378_9STRA2.880e-9547.12RPOLD domain-containing protein n=2 Tax=Albugo Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 4..309
NoneNo IPR availablePANTHERPTHR11800:SF2DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3coord: 4..309
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 17..307
e-value: 3.7E-65
score: 232.4
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 19..301
e-value: 4.5E-20
score: 72.1
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 8..300
e-value: 3.9E-85
score: 287.6
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 5..310
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 43..182
e-value: 3.9E-85
score: 287.6
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 42..186
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 49..185
e-value: 4.1E-30
score: 104.4
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved sitePROSITEPS00446RNA_POL_D_30KDcoord: 31..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1562contigP-wetherbeei_contig1562:2867..4398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1562.4.1mRNA_P-wetherbeei_contig1562.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1562 2820..4484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1562.4.1 ID=prot_P-wetherbeei_contig1562.4.1|Name=mRNA_P-wetherbeei_contig1562.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp
MPSRAPKIEIIELRDDYVEFRLSDTDTSVANALRRAMIAEVPTMAIDLVT
ITTNTSVLQDEFLAHRLGLIPLQITDPKVKFLYNHDCECEDHCQRCSVEF
SLDVSYNDLIGSAAQEHDKDEPVHVTTQNLKSSDPRVAPIHFSASDHVEF
QTEPGIMIAKLAKGQRISLTAVAKKGVAKEHAKWSPVAVATYKFDPVVEI
NEDVMQALNQVQKQEFVECCPTKVYALDPRTGNPYVKDAQECVYCDDCVL
LASAFKRRPEDDPVVTVRPRDDSFLFQVETNGSVTAEAVVADALQVLSEK
LQALRNEVMHLRQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR036603RBP11-like
IPR036643RNApol_insert_sf
IPR011262DNA-dir_RNA_pol_insert
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS