prot_P-wetherbeei_contig15570.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15570.3.1
Unique Nameprot_P-wetherbeei_contig15570.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length58
Homology
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BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Match: A0A4D9D3F9_9STRA (Sld5 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3F9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.410e-12
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    1 VELPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFY 50
            VELP WL   L  +NMV +ELP +YSARFR+ L AG  AV++RERS +FY
Sbjct:   47 VELPLWLALALQAKNMVRVELPRHYSARFREDLLAGPDAVDIRERSAFFY 96
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BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Match: A0A482SDB0_9ARCH (Sld5 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDB0_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 1.420e-10
Identity = 24/52 (46.15%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:    1 VELPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFYRV 52
            VELP W+ ++L ++ M+ ++LP ++  + RD +AAGA+ +NL+E SNYFY V
Sbjct:   46 VELPLWMAQILFRKGMITMDLPKHFERKMRDNIAAGASNLNLKEYSNYFYEV 97
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BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Match: A0A7S2RKA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKA9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.450e-8
Identity = 22/50 (44.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:    1 VELPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFY 50
            V+LP WL R+L ++NM  + LP ++  +FR++L AG A++NLR++S +F+
Sbjct:   67 VDLPLWLARLLHEKNMCQVGLPRHFREKFREELEAGPASINLRDKSAHFF 116
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BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Match: A0A4V3WRA3_CAMSI (Sld5 domain-containing protein n=3 Tax=Ericales TaxID=41945 RepID=A0A4V3WRA3_CAMSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.910e-7
Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0 
Query:    1 VELPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFYRVCLRL 56
            VELPFWL R L  +  V I LP  ++ + R++LAA AA V+LR R  YFY +  +L
Sbjct:   46 VELPFWLARELHLRQAVSINLPHCFNQKTREELAADAAHVDLRNRCPYFYELGRKL 101
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BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Match: A0A1R2CRV2_9CILI (Sld5 domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CRV2_9CILI)

HSP 1 Score: 52.4 bits (124), Expect = 1.090e-6
Identity = 20/54 (37.04%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:    3 LPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFYRVCLRL 56
            +P WLG  +A++++  IE+P ++S  +R+ L A    ++L+ER+NYF+ V ++L
Sbjct:   50 IPLWLGISMARRDLAKIEVPKFFSDSYRNTLKADPKIISLKERTNYFFEVGIKL 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15570.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4D9D3F9_9STRA7.410e-1260.00Sld5 domain-containing protein n=3 Tax=Monodopsida... [more]
A0A482SDB0_9ARCH1.420e-1046.15Sld5 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S2RKA9_9STRA1.450e-844.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4V3WRA3_CAMSI3.910e-748.21Sld5 domain-containing protein n=3 Tax=Ericales Ta... [more]
A0A1R2CRV2_9CILI1.090e-637.04Sld5 domain-containing protein n=1 Tax=Stentor coe... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038437GINS complex, subunit Psf3 superfamilyGENE3D1.20.58.2050coord: 1..57
e-value: 8.3E-16
score: 59.9
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 1..57
e-value: 9.4E-7
score: 29.3
IPR010492GINS complex, subunit Psf3PANTHERPTHR22768UNCHARACTERIZEDcoord: 1..56
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 21..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15570contigP-wetherbeei_contig15570:1209..1547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15570.3.1mRNA_P-wetherbeei_contig15570.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15570 1209..1547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15570.3.1 ID=prot_P-wetherbeei_contig15570.3.1|Name=mRNA_P-wetherbeei_contig15570.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp
VELPFWLGRVLAKQNMVHIELPAYYSARFRDQLAAGAAAVNLRERSNYFY
RVCLRLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038437GINS_Psf3_sf
IPR021151GINS_A
IPR010492GINS_Psf3
IPR036224GINS_bundle-like_dom_sf