prot_P-wetherbeei_contig15570.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15570.2.1
Unique Nameprot_P-wetherbeei_contig15570.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length47
Homology
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: A0A2R5G683_9STRA (DNA replication complex GINS protein PSF3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G683_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.550e-8
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MADGYFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGSKA 47
            MA  Y++++AIL  EERVP TF SDAQD+G+LD ++    L  G+KA
Sbjct:    1 MASAYYDLDAILAEEERVPTTFLSDAQDLGILDSSSDNDDLSRGTKA 47          
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: A0A662XEE6_9STRA (Sld5 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEE6_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.470e-6
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    4 GYFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGS 45
            GYF+I+ IL ++ERV CTF +DAQ  G LD +  E+ L++GS
Sbjct:    2 GYFDIDEILASDERVKCTFATDAQGCGYLDASCTEEDLKSGS 43          
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: A0A662Y8C0_9STRA (Sld5 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8C0_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 3.930e-6
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MADGYFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGS 45
            M+ GYF+I+ IL  +ERV CTF +DAQ  G LD +  E+ L+ GS
Sbjct:    1 MSGGYFDIDEILAGDERVKCTFATDAQGCGYLDASCTEEDLKNGS 45          
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: A0A8K1FII7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FII7_PYTOL)

HSP 1 Score: 48.5 bits (114), Expect = 2.060e-5
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MADGYFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGS 45
            M+ GYF++  IL  +ER+ CTFQ+DA D   LDP+  +  L++G+
Sbjct:    1 MSAGYFDVNDILAGDERIKCTFQTDAIDCAYLDPSCVDDDLKSGA 45          
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: A0A024GCS2_9STRA (Sld5 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCS2_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 5.450e-5
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    5 YFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGSK 46
            Y++I  IL  EERV CTF +DAQ+   LDP++ E  ++AGS+
Sbjct:    4 YYDIHEILAGEERVNCTFLTDAQECAYLDPSSLEDDIKAGSE 45          
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Match: F0WWF5_9STRA (Uncharacterized protein AlNc14C321G10589 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWF5_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 5.450e-5
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    5 YFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGSK 46
            Y++I  IL  EERV CTFQ+DAQ+   LDP++    ++AGS+
Sbjct:    4 YYSIHEILAGEERVNCTFQTDAQECAYLDPSSLGDDIKAGSE 45          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15570.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2R5G683_9STRA3.550e-853.19DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
A0A662XEE6_9STRA2.470e-652.38Sld5 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A662Y8C0_9STRA3.930e-651.11Sld5 domain-containing protein n=2 Tax=Nothophytop... [more]
A0A8K1FII7_PYTOL2.060e-544.44Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GCS2_9STRA5.450e-550.00Sld5 domain-containing protein n=1 Tax=Albugo cand... [more]
F0WWF5_9STRA5.450e-550.00Uncharacterized protein AlNc14C321G10589 n=1 Tax=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038437GINS complex, subunit Psf3 superfamilyGENE3D1.20.58.2050coord: 4..47
e-value: 1.3E-9
score: 39.7
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 2..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15570contigP-wetherbeei_contig15570:946..1086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15570.2.1mRNA_P-wetherbeei_contig15570.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15570 946..1086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15570.2.1 ID=prot_P-wetherbeei_contig15570.2.1|Name=mRNA_P-wetherbeei_contig15570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
MADGYFNIEAILQAEERVPCTFQSDAQDMGVLDPTTGEQHLRAGSKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038437GINS_Psf3_sf