prot_P-wetherbeei_contig15567.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15567.1.1
Unique Nameprot_P-wetherbeei_contig15567.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length497
Homology
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Match: A0A1F9RS40_9BACT (Uncharacterized protein n=5 Tax=Bacteria TaxID=2 RepID=A0A1F9RS40_9BACT)

HSP 1 Score: 317 bits (813), Expect = 1.520e-98
Identity = 161/257 (62.65%), Postives = 198/257 (77.04%), Query Frame = 0
Query:    3 KRVVYGLAFLGAIAIAAPPFVKLVTNQSVVISDISVPSALDDRGLGGAVISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVGGLSLGGLVTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQGVIYNSPKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIANDTPGDDGWAFNMRGLIQRDQRHYPEAIAQFREAIRREPAFVYAYSNLSQTLRMSGQFDE 259
            KRV + +  + AIA+  P FVKLVT + VVI+DI+VPSA+ DRGL   VIS+RILD L E+    GS+K + A+TG+S  SQLP+IQLPVGG++L   ++Q+R FLGY DT ISGEIVT + GD DK     YTLRLRM   GV+Y+S K S ++DS I +AA+E+MHRFDPINLG+Y Y++KDY NAYRMTETA+AND+PGDDGWAFNMRGLI RDQ   PEAIAQFREAIRREP F  AY  LS+TLR++G  +E
Sbjct:   38 KRVAFNVVIIAAIAVGVPVFVKLVTTRGVVINDITVPSAVADRGLTSDVISRRILDQLHEMKMNAGSKKEQEAITGTSTESQLPDIQLPVGGINLAVAISQIRHFLGYVDTKISGEIVTESAGD-DKGNAPAYTLRLRMVGHGVLYHSAKPSASIDSQIAEAAIEVMHRFDPINLGYYLYRRKDYVNAYRMTETALANDSPGDDGWAFNMRGLILRDQGQCPEAIAQFREAIRREPKFAVAYYKLSETLRLTGDLEE 293          
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Match: A0A1W6MYI3_9HYPH (Uncharacterized protein n=1 Tax=Methylocystis bryophila TaxID=655015 RepID=A0A1W6MYI3_9HYPH)

HSP 1 Score: 194 bits (493), Expect = 1.630e-51
Identity = 101/235 (42.98%), Postives = 144/235 (61.28%), Query Frame = 0
Query:   24 KLVTNQSVVISDISVPSALDDRGLGGAVISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVGGLSLGGLVTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQGVIYNSPKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIANDTPGDDGWAFNMRGLIQRDQRHYPEAIAQFREAIRREPAFVYAYSNLSQTLRMSGQFD 258
            KL    S V+ DISVP+AL ++G+ G VI+Q+ILDH+ E+    GSRK ++ ++G    S +P I LPVGG ++G +V++VR  LGY +T I+GE+        DKD  + Y LRLR+  +G IY S     +V  LI  AA  IMH+FDPINLG+++Y++KDY  A    + A+A+    +  WA+ MRGLI RD+    EA   F + +  +P F   + NLS  LR+ GQ D
Sbjct:   63 KLAAKTSFVVKDISVPAALQEQGITGNVIAQQILDHISEIDAAAGSRKQKAQISGLDFQSTMPTINLPVGGFNMGTIVSEVRRLLGYTETVITGEVFIEE--PKDKDQPAKYGLRLRIAGEGPIYKSETPEPDVQRLIAAAAERIMHKFDPINLGYFYYRQKDYDKAGETADFALASANADNYPWAYTMRGLIARDRGKVSEAARDFHQVVSLDPNFGMGHVNLSGILRLDGQLD 295          
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Match: UPI001BFECBF9 (tetratricopeptide repeat protein n=1 Tax=Polynucleobacter sp. TSB-Sco08W16 TaxID=1758374 RepID=UPI001BFECBF9)

HSP 1 Score: 164 bits (415), Expect = 7.030e-41
Identity = 87/253 (34.39%), Postives = 144/253 (56.92%), Query Frame = 0
Query:    9 LAFLGAIAIAAPPFVKLVTNQSVVISDISVPSALDDRGLGGAVISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVG--GLSLGGLVTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQGVIYNSPKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIANDTPGDDGWAFNMRGLIQRDQRHYPEAIAQFREAIRREPAFVYAYSNLSQTLRMSGQFDE 259
            L  +   A+  P   K++T  ++++ +++VP+ L++RGL G V SQR++D + E+   T   K    + G S  +Q P+I LP+   G++L  L+  ++  +G  D  I GE++T      + D L+ Y++R R+   G IY S     ++D L E AAM +M  ++PI + +Y+  K+ Y +A+RMTE AI    PGD  WA  +RGLI+ DQ  +  A  +FR  + R  +F   ++NLS  LR  G+F++
Sbjct:   42 LTVIALFALIVPLIFKVLTKNTIMVQEVTVPAELENRGLSGRVFSQRVIDKILEIANYTEVLKEREDIYGLSKKNQRPDIDLPINIFGVNLETLLGFIKTGIGKSDVRIVGEVITEIPAKPNSDELAGYSVRFRVAKVGTIYQSTSPITDIDLLAEKAAMGVMEEYEPITMAYYYRGKQKYEDAFRMTEKAILKKRPGDIVWAHFVRGLIEMDQARWALAEEEFRFVLERNTSFPRIHNNLSIVLRRQGKFED 294          
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Match: A0A8I1TEN7_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A8I1TEN7_9HYPH)

HSP 1 Score: 82.0 bits (201), Expect = 6.250e-13
Identity = 66/245 (26.94%), Postives = 113/245 (46.12%), Query Frame = 0
Query:    1 MVKRVVYGLAFLGAIAIAAPPFVKLVTNQSVVISDISVPSALDDRGLGGAVISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVGGLSLGGLVTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQG--VIYNSPKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIANDTPGDDGWAFNMRGLIQRDQRHYPEAIAQFREAIRREPAFVYA 243
            +++ +++ +  + A+ +  P  +  + +  V I+ ISVP+AL+++GL G VI  R+ D   +V     + K    V  SS   Q  E  +P  G+S   L+  VRAF G  +T ISGE+       +D  T+    LRLR+  +   VI   P  + +++     A  E +   DP+  G    + +            +A +   D  WA  +   +  D++ Y +A A   EA+R +  FV A
Sbjct:   35 LIRSILFNVLVVLAMIVIVPVMLSELASDRVTITTISVPAALEEKGLNGTVIGNRLWDAWSKVTDEVKAAKETRDVLPSS---QRIEFSIPDSGISFESLIHHVRAFFGRAETRISGELTCV----ADPCTIENSALRLRIIDKEIHVIDLPPPGNGDINLWFRKAVAEALMFIDPVR-GILALRSESETRTIAELRR-LAREGHPDAAWALTVAAQLTTDRKEYDKARALADEALRLDKHFVDA 270          
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Match: A0A847ZT05_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZT05_9HYPH)

HSP 1 Score: 74.3 bits (181), Expect = 1.380e-10
Identity = 70/267 (26.22%), Postives = 120/267 (44.94%), Query Frame = 0
Query:    2 VKRVVYGLAFLGAIAIAAPPFVKLVTNQSVVISDISVPSALDDRGLGGAVISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVGGLSLGGLVTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQGV---IYNSPKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIANDTPGDDG----WAFNMRG--LIQRDQRHYPE----AIAQFREAIRREPAFVYAYSNLSQTLRMSG 255
            V++++  LAFLG + +     VK++ +  +V+  I +P  + D G      +  + D+++ +         +  V  +    ++P+I +PV GLS G ++  +R   G     + G+ V      S+    ST  LR+R+  QGV   +  SP    + D++++ AA   M    P+ L  Y + +     A R    AIA      D      A N+ G  L++R ++  PE    AIA F++ I  EP    AY+N    L   G
Sbjct:   40 VRKIILNLAFLGVVGLLIFTAVKVLRSDEMVVDAIGLPKNIKDLGYTEDGAALMLSDNIRRIAGAANDSDAQLQVLANY---EVPDIAVPVEGLSFGSIIRLLRQTFGLPQNRLIGDFVCP----SEPCLSSTMELRMRL-RQGVNKPVALSPVRGTSHDAILQSAAERFMEATAPMELALYLHNEP--TGARRAEGVAIAQQIALTDNENRLTAINLLGVDLLERPEKR-PEDLKAAIAYFQQVIEAEPNAAIAYTNWGAALSALG 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15567.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1F9RS40_9BACT1.520e-9862.65Uncharacterized protein n=5 Tax=Bacteria TaxID=2 R... [more]
A0A1W6MYI3_9HYPH1.630e-5142.98Uncharacterized protein n=1 Tax=Methylocystis bryo... [more]
UPI001BFECBF97.030e-4134.39tetratricopeptide repeat protein n=1 Tax=Polynucle... [more]
A0A8I1TEN7_9HYPH6.250e-1326.94Tetratricopeptide repeat protein n=1 Tax=Hyphomicr... [more]
A0A847ZT05_9HYPH1.380e-1026.22Tetratricopeptide repeat protein n=1 Tax=Phyllobac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 411..444
e-value: 2.4E-5
score: 33.8
coord: 241..274
e-value: 0.052
score: 22.7
coord: 377..410
e-value: 6.1
score: 15.8
coord: 207..240
e-value: 0.034
score: 23.3
coord: 343..376
e-value: 0.014
score: 24.6
coord: 445..478
e-value: 0.32
score: 20.1
coord: 275..308
e-value: 6.9
score: 15.6
coord: 309..342
e-value: 3.8
score: 16.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 207..240
score: 8.1424
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 275..308
score: 9.3814
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 241..274
score: 9.7059
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 411..444
score: 10.5614
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 343..376
score: 10.3254
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 445..478
score: 8.5554
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 354..495
e-value: 5.7E-31
score: 109.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 149..353
e-value: 1.6E-37
score: 131.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 175..482
NoneNo IPR availablePFAMPF13432TPR_16coord: 383..444
e-value: 7.0E-7
score: 29.7
coord: 212..274
e-value: 4.7E-8
score: 33.5
coord: 280..341
e-value: 2.3E-8
score: 34.5
NoneNo IPR availablePFAMPF13374TPR_10coord: 343..370
e-value: 0.0076
score: 16.1
NoneNo IPR availablePANTHERPTHR44809FAMILY NOT NAMEDcoord: 331..483
coord: 209..309
coord: 298..404
coord: 215..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15567contigP-wetherbeei_contig15567:36..1526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15567.1.1mRNA_P-wetherbeei_contig15567.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15567 36..1532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15567.1.1 ID=prot_P-wetherbeei_contig15567.1.1|Name=mRNA_P-wetherbeei_contig15567.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=497bp
MVKRVVYGLAFLGAIAIAAPPFVKLVTNQSVVISDISVPSALDDRGLGGA
VISQRILDHLQEVVTGTGSRKGESAVTGSSIASQLPEIQLPVGGLSLGGL
VTQVRAFLGYRDTTISGEIVTATVGDSDKDTLSTYTLRLRMGSQGVIYNS
PKASDNVDSLIEDAAMEIMHRFDPINLGFYHYKKKDYANAYRMTETAIAN
DTPGDDGWAFNMRGLIQRDQRHYPEAIAQFREAIRREPAFVYAYSNLSQT
LRMSGQFDEAAQAARKVIELAPKERQGYTNLALVLIEQGKGDEAVELMNK
AVAAEPRSHHSHFDLGVILQRLKRLDASAAAFRKSAEVKPDFADAYMHLS
NVLHLTGNYPEALALAQKAADLDPKSPMPWNLLGLYALERKDYPHAAASF
RKATAIDKVFVEGYGNLGIALSGEKKYPDAIAAFRKAAEFDPTNADILVH
WAEALEAHGDAAGAIDSYRKAIVLDPKAADALNVRIARLSQGRARH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf