prot_P-wetherbeei_contig15519.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15519.1.1
Unique Nameprot_P-wetherbeei_contig15519.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length215
Homology
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A140GUT3_9HYPH (Nucleic-acid-binding protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GUT3_9HYPH)

HSP 1 Score: 272 bits (696), Expect = 6.200e-90
Identity = 138/210 (65.71%), Postives = 162/210 (77.14%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDGVVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGKSGESGNESGNG 210
            GPR+ GP  ER C  TRTVKPVE+LIRFVV PDGVVPDLK KLPGRG+W+TA +  + DA+    FARGFKRD+R   +L D TE ++ RAVLDALAIAGK+G V+ GF KVEAA+ R+ +  L+HA+DAGHDGVAKL G L  RPD DRI  ++ FT+AQLDLAL RSNVVHAALLAGPA+DT L R  RLERFR+G  G+SG   GNG
Sbjct:   13 GPRKGGPGTERLCAVTRTVKPVEDLIRFVVGPDGVVPDLKRKLPGRGLWITADRLTLKDAVTRNVFARGFKRDIRATAELIDQTELMLQRAVLDALAIAGKAGSVLTGFAKVEAAIAREPIVGLIHASDAGHDGVAKLAGALRHRPDCDRILAIKTFTTAQLDLALGRSNVVHAALLAGPANDTVLARLARLERFRSGVPGDSG---GNG 219          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A6N7GTM7_9HYPH (RNA-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GTM7_9HYPH)

HSP 1 Score: 232 bits (591), Expect = 4.850e-74
Identity = 127/200 (63.50%), Postives = 146/200 (73.00%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDGV-VPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLL-RPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTG 198
            GPR+     ER C AT TV+PV++++RFVVSP+G  VPDLK +LPGRG+WVTAT++A+  AIA KAFAR FKRDVR  PDL   TER++ RA LDALAIA K+GRVV GF KVEAAL  D  AAL+HA+DA  DGV KL       R D   + VV  F SAQLDLA+ RSNVVHAALL GP S TFL R  RLERFRTG
Sbjct:   13 GPRKAAHGTERLCAATGTVRPVDDMLRFVVSPEGTAVPDLKRRLPGRGVWVTATRSALGQAIARKAFARSFKRDVRTTPDLVQTTERMLERAALDALAIAYKAGRVVVGFAKVEAALLHDNAAALVHASDAAPDGVRKLDSAARRNREDHRPVAVVDAFASAQLDLAMGRSNVVHAALLGGPESRTFLARAARLERFRTG 212          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A1Q7BPA1_9PROT (YlxR domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BPA1_9PROT)

HSP 1 Score: 233 bits (594), Expect = 4.950e-74
Identity = 123/199 (61.81%), Postives = 145/199 (72.86%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDGV-VPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTG 198
            GP +  P  +RFC A+  VKPV+E+IRFVV PDG  VPDLK +LPGRGIW+TAT+ A+  AIA KAFAR FKRDVR+ PDL + TERL+ RA LDALAI  K+G++  GF   +AAL R RV ALL+A +A  DG  KL   L  R DA  I V+  FTSAQLDLAL RSNV+HAALLAGP S+TFL R  RL+ FRTG
Sbjct:   13 GPHKRAPGTQRFCAASGAVKPVDEMIRFVVGPDGAAVPDLKRRLPGRGIWITATRQALRSAIARKAFARAFKRDVRLAPDLVETTERLIERAALDALAICHKAGKLAIGFANADAALARARVVALLNAAEAAPDGTRKLTAALQRRADAAGIAVIDAFTSAQLDLALGRSNVIHAALLAGPESETFLARTARLDYFRTG 211          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A537SVY0_9PROT (RNA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SVY0_9PROT)

HSP 1 Score: 229 bits (583), Expect = 1.060e-72
Identity = 126/202 (62.38%), Postives = 142/202 (70.30%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGKSG 201
            G R++ P  +R C  T  V+P+EEL RFVV+PDG VVPDLK +LPGRGIW+TAT+ A+  A+A   FARGFKRDVRV  DL   TE L+ RA LDALAI  K+G+V  GF  VEA L R RV ALL+A  A  DGV KL   L  R D   I VV  FTSAQLDLAL RSNVVHAALLAGP S+TFL R  RLERFRTG  G
Sbjct:   13 GTRKSAPGTQRLCAVTGEVRPIEELTRFVVAPDGSVVPDLKRRLPGRGIWITATRHALRAAMARNTFARGFKRDVRVASDLVATTEGLIERAALDALAICHKAGKVAIGFANVEAVLARARVVALLNAAQAAPDGVRKLAAALHHRADVAEIAVVDAFTSAQLDLALGRSNVVHAALLAGPESETFLARHARLERFRTGSEG 214          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A1Q7B6Y0_9PROT (YlxR domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7B6Y0_9PROT)

HSP 1 Score: 227 bits (579), Expect = 4.590e-72
Identity = 120/199 (60.30%), Postives = 141/199 (70.85%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDGV-VPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTG 198
            GPR+     +RFC AT  ++P++E+IRFV+ PDG  VPDLK +LPGRGIW+TAT+ A+  AI  KAFAR FKRDVR+ PD  + TERL+ R  LDALAI  K+G V  GF  VEA L R  V ALL A +A  DGV KL   L  R DA  I VV  FTSAQLDLAL R+NV+HAALLAGP S+TFL R  RL+RFRTG
Sbjct:   13 GPRKRAAGTQRFCAATGAIRPIDEMIRFVIGPDGTPVPDLKRRLPGRGIWITATREALRAAITRKAFARAFKRDVRLAPDFVEATERLIERTALDALAICHKAGNVAIGFANVEAVLARAHVVALLDAVEAAPDGVKKLAAVLRRRADAAEIVVVDTFTSAQLDLALGRANVIHAALLAGPESETFLARAARLQRFRTG 211          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A6L5FLB4_9HYPH (RNA-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FLB4_9HYPH)

HSP 1 Score: 224 bits (572), Expect = 5.470e-71
Identity = 125/202 (61.88%), Postives = 146/202 (72.28%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLR-PDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGKS 200
            GPR +    ER C+ATRTVKP+ E+IRFVV+PDG VVPDLK KLPGRGIWVTAT+ A++ A+  KA   GFKRDVR    L  LT+ L+ RAVLDALAI GK+   V GF KV+AAL R+ V ALLHA+ A  DGV KL   L  R  DA+R+ +V + +S QLDLAL+R NVVHAALLAG  SDTFL R  RL RFRTG S
Sbjct:   15 GPRSDQSVTERMCIATRTVKPIGEMIRFVVAPDGTVVPDLKRKLPGRGIWVTATRDALAQAVKRKAIGTGFKRDVRADAGLVVLTDGLLERAVLDALAICGKASLAVMGFAKVDAALAREPVVALLHASGAAADGVRKLDAALQRRFDDANRVRIVTDLSSDQLDLALARPNVVHAALLAGSVSDTFLARHARLTRFRTGSS 216          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A537Q1Y3_9PROT (RNA-binding protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q1Y3_9PROT)

HSP 1 Score: 224 bits (570), Expect = 7.960e-71
Identity = 123/201 (61.19%), Postives = 145/201 (72.14%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRP--DADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTG 198
            GPR+     ER CVATR VKP  ++IRFVV PDG VV DLK KLPGRG+WVTAT+ A+++AI  K  AR FKR+VRV PDLAD  E L+ R+ LDALAIA K+G + AGF KVEAAL R  V AL+HA DAG DG+AK+      R    A+RI V+  F+SAQLDLAL R+NV+HAALLA  A D+FL R   LERFRTG
Sbjct:   11 GPRKKAAATERLCVATRRVKPTTDMIRFVVGPDGQVVADLKRKLPGRGVWVTATRQALAEAIRRKTLARAFKREVRVEPDLADRVEALLERSALDALAIARKAGALAAGFAKVEAALQRAGVVALIHAADAGPDGLAKIAAAARRRTGSQAERIPVIELFSSAQLDLALGRANVIHAALLADRAGDSFLARCRSLERFRTG 211          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A1W6ZR39_9HYPH (YlxR domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZR39_9HYPH)

HSP 1 Score: 218 bits (555), Expect = 2.270e-68
Identity = 117/197 (59.39%), Postives = 140/197 (71.07%), Query Frame = 0
Query:    6 GPRAERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDAD--RIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGK 199
            G   ER CV TR ++P+ +LIRFVV PDG  VPD+K  LPGRG+WVTAT+ AV  AI  K FA+GFKRDVR  P+L DLT+RL+ RA LDALAIAGK+G VV GF+KVEAA+ R  +  LLHA+D   +G  K    L   P+ D   I V+R F+  QLDLAL RSNV+HAALLAGPAS  FL R  R+ RFRTG+
Sbjct:   17 GAATERMCVVTREIRPIADLIRFVVGPDGNAVPDVKRNLPGRGLWVTATREAVDQAIRRKLFAKGFKRDVRSGPELTDLTDRLLERAALDALAIAGKAGEVVTGFSKVEAAIQRGGLLGLLHASDGSPEGARKATALLNRNPEDDSPEIPVIRAFSGTQLDLALGRSNVIHAALLAGPASQGFLTRCLRMMRFRTGE 213          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: A0A363TU83_9BRAD (DNA-binding protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TU83_9BRAD)

HSP 1 Score: 217 bits (552), Expect = 5.180e-68
Identity = 120/199 (60.30%), Postives = 139/199 (69.85%), Query Frame = 0
Query:    1 GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLR--PDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFR 196
            GPR     AER CVATRTV+PV ++IRFVV PDG VVPD++ +LPGRG+WVTAT+ AV +AI  KAFAR FKR+VR   DL  + E L+ RA LDAL++A K+G V  GF KVEAAL    +A LLHA DAG DGV K+      R   +A  I VV  FTS QLDLAL R NV+HAALLAGPAS  FL R   LERFR
Sbjct:   13 GPRSTAAGAERLCVATRTVRPVADMIRFVVGPDGAVVPDIRRRLPGRGVWVTATRQAVDEAIRRKAFARSFKREVRCAADLGAMVEGLLERAALDALSLANKAGLVAPGFGKVEAALAAAELAGLLHAADAGSDGVRKIAAAARRRFGAEAGNIPVVAAFTSVQLDLALGRPNVIHAALLAGPASKAFLARTMSLERFR 211          
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Match: UPI0009EBA915 (RNA-binding protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=UPI0009EBA915)

HSP 1 Score: 213 bits (542), Expect = 4.940e-66
Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 0
Query:    9 AERFCVATRTVKPVEELIRFVVSPDG-VVPDLKCKLPGRGIWVTATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAGKSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLL--LRPDADRIGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGKSGES 203
            AERFC  TR +KPV E+IRFVV P G  VPD+K KLPGRGIW+TAT+ A++DA+    F RGFKRD++V  +L    E+L+ +A LDALAIAGK+G VVAG  KVEAALG D V AL+HA DA  DG  KL   L   + P    I ++  F    LDLAL+RSNVVHAA+LAGPAS+TFL R  RL R+R+GKS +S
Sbjct:   26 AERFCALTRELKPVAEMIRFVVGPAGDAVPDVKRKLPGRGIWITATRDALTDAVKRNVFPRGFKRDLKVSRELPAEVEQLLAKAALDALAIAGKAGNVVAGSAKVEAALGGDGVRALIHAADAAPDGKRKLNAALQRNISPGQREITLIEAFNGPDLDLALNRSNVVHAAVLAGPASETFLTRVARLTRYRSGKSPDS 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15519.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A140GUT3_9HYPH6.200e-9065.71Nucleic-acid-binding protein n=1 Tax=Rhodoplanes s... [more]
A0A6N7GTM7_9HYPH4.850e-7463.50RNA-binding protein n=1 Tax=Hyphomicrobiales bacte... [more]
A0A1Q7BPA1_9PROT4.950e-7461.81YlxR domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A537SVY0_9PROT1.060e-7262.38RNA-binding protein n=1 Tax=Alphaproteobacteria ba... [more]
A0A1Q7B6Y0_9PROT4.590e-7260.30YlxR domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A6L5FLB4_9HYPH5.470e-7161.88RNA-binding protein n=1 Tax=Hyphomicrobiales bacte... [more]
A0A537Q1Y3_9PROT7.960e-7161.19RNA-binding protein n=2 Tax=Alphaproteobacteria ba... [more]
A0A1W6ZR39_9HYPH2.270e-6859.39YlxR domain-containing protein n=1 Tax=Pseudorhodo... [more]
A0A363TU83_9BRAD5.180e-6860.30DNA-binding protein n=1 Tax=Bradyrhizobiaceae bact... [more]
UPI0009EBA9154.940e-6658.59RNA-binding protein n=1 Tax=Pseudolabrys sp. Root1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 92..187
e-value: 1.9E-17
score: 64.9
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 92..179
IPR007393Domain of unknown function DUF448PFAMPF04296YlxRcoord: 11..82
e-value: 4.2E-20
score: 71.4
IPR035931YlxR-like superfamilyGENE3D3.30.1230.10coord: 4..91
e-value: 8.1E-19
score: 69.2
IPR035931YlxR-like superfamilySUPERFAMILY64376YlxR-likecoord: 10..94
IPR037465Uncharacterized protein YlxRPANTHERPTHR34215BLL0784 PROTEINcoord: 9..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15519contigP-wetherbeei_contig15519:3..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15519.1.1mRNA_P-wetherbeei_contig15519.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15519 3..647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15519.1.1 ID=prot_P-wetherbeei_contig15519.1.1|Name=mRNA_P-wetherbeei_contig15519.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=215bp
GPRRNGPRAERFCVATRTVKPVEELIRFVVSPDGVVPDLKCKLPGRGIWV
TATKAAVSDAIAHKAFARGFKRDVRVPPDLADLTERLMTRAVLDALAIAG
KSGRVVAGFTKVEAALGRDRVAALLHATDAGHDGVAKLKGPLLLRPDADR
IGVVREFTSAQLDLALSRSNVVHAALLAGPASDTFLGRFERLERFRTGKS
GESGNESGNGRAPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029064L30e-like
IPR007393DUF448
IPR035931YlxR-like_sf
IPR037465YlxR