prot_P-wetherbeei_contig15488.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15488.1.1
Unique Nameprot_P-wetherbeei_contig15488.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length336
Homology
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A1W0A6R9_9STRA (RING-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6R9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.330e-20
Identity = 71/211 (33.65%), Postives = 98/211 (46.45%), Query Frame = 0
Query:   68 RNRAGVGNANHLLNFQFTPPQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRRREQFLQANFKFALLPL-CDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGDGV-RRCPMCFESVSREALRGA-ERRILGVPAVGQPTTFFLLRRERPCLVPEA 275
            RN     +ANHLLNF                 P R+                  R R++FL ANF+F L P+  ++   A YDP++L  W+ ++ V             + T E  E        RCPICLDA R P+IT+CGH+FC  CIL +L+  +   RRCPMCF+SV +  LR     ++  +P V +  TF  L R +    P A
Sbjct:   37 RNGRKRVSANHLLNFSL---------------PEREELTNIVRKKKAPPP----RTRDEFLHANFRFVLTPMEKEKMQTASYDPESLTQWNNIEQV-------------IVTHEQPEVDQ-----RCPICLDALRAPKITRCGHIFCWNCILMYLSLSENYWRRCPMCFDSVKKTDLRSVLVDKMRTLPNVNRMATFQFLHRSKGSWFPHA 210          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A835YQ46_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ46_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.220e-19
Identity = 61/155 (39.35%), Postives = 77/155 (49.68%), Query Frame = 0
Query:  129 QANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDA-----DPGWRCPICLDAPRCPRITKCGH-VFCAWCILRHLAGGDGVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLVPEAAD 277
            +ANF+F LLP     H +F + D +VDW +V+ V             +   E  E         + GWRCPICL+ PRCPRIT+CGH  FCA CILRHL GG+  R             L GA  R    P  GQ  +F LL R++  L+P   D
Sbjct:   78 KANFQFLLLPGTSLEHRSFTNADVVVDWESVESV------------CLIQGEGGEXXXXXXXXXEAGWRCPICLEHPRCPRITRCGHGPFCAVCILRHL-GGEPYRXXXXXXXXXXXXRLAGALLRAHKPPVAGQSASFVLLLRDKEELIPRGVD 219          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A8D8T540_9HEMI (RING finger protein 10 n=13 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8T540_9HEMI)

HSP 1 Score: 99.8 bits (247), Expect = 2.350e-19
Identity = 68/207 (32.85%), Postives = 96/207 (46.38%), Query Frame = 0
Query:   75 NANHLLNFQFTPPQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRR----REQFLQANFKFALLPLCDRSHEAFY----DPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGD-GVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLV 272
            N NHLLNFQ+  P     S    S    ++            +  S  +    +EQFLQAN +F +     R+ E +     DPDTLV W  +  ++                     G  +   +CPICLD PR P++T+CGH FC  CIL +LA  D   R+CP+C+E+V    L+     I    AV +  TF L++RER  +V
Sbjct:  108 NLNHLLNFQYASPPSHYGSGGGRSSYTTRSHGAAGYNNYLMQSLASVHKHKYNKEQFLQANCQFVV-----RAGEDYAVHLGDPDTLVKWEFIQQIR---------------------GFGNEDIKCPICLDLPRAPQLTRCGHCFCWPCILHYLALSDKSWRKCPICYEAVHLNDLKSFRSVIKHPRAVNEVVTFQLMKRERGSMV 288          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A3Q0JCT8_DIACI (RING finger protein 10 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0JCT8_DIACI)

HSP 1 Score: 97.1 bits (240), Expect = 1.760e-18
Identity = 66/201 (32.84%), Postives = 93/201 (46.27%), Query Frame = 0
Query:   77 NHLLNFQFTPPQPQSF----SAYSHSPPRRQAXXXXXXXXXXXXAFGSFRR----REQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGD-GVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRER 268
            NHLLNFQ+ PP         S+Y +    R              +  S  +    +EQFLQAN +F ++ L +       DPD LV W  +  ++                     G  +   +CPICLD PR P++T+CGH FC  CIL +LA  D   R+CP+C+E+V    L+     I    AV +  TF L++RER
Sbjct:  159 NHLLNFQYAPPSSYGAGGGRSSYGNRSQSRGTDYSMGYNNFLMQSLASVHKHKYNKEQFLQANCQF-VVRLGEDYGIHLGDPDQLVKWEYIQQIR---------------------GFGNEDIKCPICLDLPRAPQMTRCGHCFCWPCILHYLALSDKSWRKCPICYEAVHLGDLKSFRSVIKRARAVNEEVTFQLMKRER 337          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: D2V1P1_NAEGR (RING finger domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V1P1_NAEGR)

HSP 1 Score: 96.3 bits (238), Expect = 3.130e-18
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 0
Query:  122 RRREQFLQANFKFALLPLCDRS-------------HEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGD-GVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLVPEAADEL 279
            + +E+F+ ANF F L PL   +             +   +D DTLVDW  +++V + T                     D    CPICLD  + P++TKCGHVFC  CILRH+A G+   R+CP+C ESV  +ALR                   LL+R++  ++P+   EL
Sbjct:  191 KTKEEFVLANFHFVLRPLSQSNTNFINQQFHITEYNNGKFDADTLVDWDTIELVIQQTH--------------------DENQECPICLDTFKAPKMTKCGHVFCYPCILRHVALGETNYRKCPLCNESVYIDALRSVRVEYRKKYKENDKMNLVLLKRDKKLIIPDLVSEL 342          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: L8HHQ7_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHQ7_ACACA)

HSP 1 Score: 92.8 bits (229), Expect = 4.830e-17
Identity = 61/198 (30.81%), Postives = 90/198 (45.45%), Query Frame = 0
Query:   76 ANHLLNFQFTPPQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRRREQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGD-GVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLV 272
            AN+LLNF +  P       +  S P R+                   ++E+FLQAN++F +    D      Y+ D LVDW  ++ +   T                        + CPICLDAP  P++TKCGH++C  CI R+L     G R+CP+CF+SVS + L+     ++     G    F L+RR + C V
Sbjct:  191 ANYLLNFTYERP------VHDWSAPARRRTPVVEF------------KKERFLQANYRFVVNAGGDYVRH-LYETDQLVDWDEIEQIVLQTPVP---------------------YNCPICLDAPMAPKMTKCGHIYCWSCINRYLGMAQKGWRKCPICFDSVSTKRLKSTSIELVPEYHEGDSIKFTLMRRHKDCTV 348          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: UPI0019298839 (RING finger protein 10 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298839)

HSP 1 Score: 92.4 bits (228), Expect = 6.300e-17
Identity = 69/211 (32.70%), Postives = 96/211 (45.50%), Query Frame = 0
Query:   75 NANHLLNFQFTP-PQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRRREQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGDGV------RRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLVPEAADE 278
            NANHLLNF + P  +PQ     S SPP R+                    ++ FLQANFKF +L       E   DPD ++ W  V  V+ ++                         +CPICL+AP CP+IT CGH++C  CILR+L  G+        ++CP+CF S+S + L       +    VG    F LL R +  LVP   ++
Sbjct:  157 NANHLLNFYYDPISRPQQ---PSRSPPTRRQRKIKPY------------NKDLFLQANFKFVVLDNGSYLSETM-DPDKMLQWEDVICVRYSSSFP---------------------VQCPICLEAPLCPQITSCGHIYCFPCILRYLLMGEEDHKGECWKKCPLCFMSISCKDLYTLRIENVTQFHVGDHVDFTLLTRAKDSLVPSMKNQ 330          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: W9R0T8_9ROSA (RING finger protein 10 n=3 Tax=Morus notabilis TaxID=981085 RepID=W9R0T8_9ROSA)

HSP 1 Score: 92.0 bits (227), Expect = 8.750e-17
Identity = 66/206 (32.04%), Postives = 97/206 (47.09%), Query Frame = 0
Query:   70 RAGVGNANHLLNFQFTP-PQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRRREQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLA------GGDGVRRCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRER 268
            R+ + + NHLLNF + P  +PQ  +     PPRRQ                    ++ FLQAN+KF +L   + + E+  DPD ++ W  +  V+ +T +                       +CPICL+AP CP+IT CGH+FC  CILR+L        GD  +RCP+CF  +S + L       +    VG    F LL R++
Sbjct:  145 RSQLMSGNHLLNFHYDPISRPQPRAP----PPRRQQKLKPY-------------NKDLFLQANYKFVVLDTGNYTPESM-DPDKMLRWEDIICVRYSTPSE---------------------VQCPICLEAPLCPQITSCGHIFCFPCILRYLLMGKEDEKGDCWKRCPLCFVMISPKDLYTISIENVKQYNVGDTLEFSLLTRQK 311          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A4D9CXT0_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXT0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.930e-16
Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 0
Query:  122 RRREQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGDGVRRCPMCFESVSREALRGAERRILGVPA 254
            R +E FLQ NF+  L PL   SH A +D D+ +DW  VD+V           + + T              CPIC D P   +IT+CGH +CA C+LR+L     VRRCPMC E + +  LR  E     +PA
Sbjct:   42 RSKEHFLQTNFRLVLSPLVPPSHPALFDADSPMDWEHVDLVL--------LPSLIPTLPP-----------CPICFDHPHAAQITRCGHHYCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPA 155          
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Match: A0A833QQ52_9POAL (RING finger protein 10 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QQ52_9POAL)

HSP 1 Score: 89.7 bits (221), Expect = 4.800e-16
Identity = 65/212 (30.66%), Postives = 94/212 (44.34%), Query Frame = 0
Query:   68 RNRAGVGNANHLLNFQFTPPQPQSFSAYSHSPPRRQAXXXXXXXXXXXXAFGSFRRREQFLQANFKFALLPLCDRSHEAFYDPDTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAPRCPRITKCGHVFCAWCILRHLAGGDGVR------RCPMCFESVSREALRGAERRILGVPAVGQPTTFFLLRRERPCLVP 273
            R   GV NAN+LLNF + P   +S +    +PP+R+                    ++ FLQAN++F +L        A  DPD ++ W  +  V+  T                         +CPICL+AP CP+IT CGH++C  CIL++   G   R      RCP+CF  +S + L       +   +VG   TF LL R +  L P
Sbjct:  101 RRNQGV-NANYLLNFSYDPIN-RSVTRGPRAPPQRKPRKIKPY------------NKDLFLQANYRFTVLDT-GNYETASMDPDKMLQWEDIICVKHRTTIP---------------------VQCPICLEAPLCPQITSCGHIYCFPCILQYFENGTENRKGEIYKRCPLCFMMISTKDLYTLVIENVKQLSVGDVVTFALLTRSKASLFP 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15488.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W0A6R9_9STRA1.330e-2033.65RING-type domain-containing protein n=1 Tax=Thraus... [more]
A0A835YQ46_9STRA2.220e-1939.35RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8D8T540_9HEMI2.350e-1932.85RING finger protein 10 n=13 Tax=Cacopsylla melanon... [more]
A0A3Q0JCT8_DIACI1.760e-1832.84RING finger protein 10 n=1 Tax=Diaphorina citri Ta... [more]
D2V1P1_NAEGR3.130e-1833.14RING finger domain-containing protein n=1 Tax=Naeg... [more]
L8HHQ7_ACACA4.830e-1730.81Zinc finger, C3HC4 type (RING finger) domain conta... [more]
UPI00192988396.300e-1732.70RING finger protein 10 n=1 Tax=Dioscorea cayennens... [more]
W9R0T8_9ROSA8.750e-1732.04RING finger protein 10 n=3 Tax=Morus notabilis Tax... [more]
A0A4D9CXT0_9STRA2.930e-1638.35RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A833QQ52_9POAL4.800e-1630.66RING finger protein 10 n=1 Tax=Carex littledalei T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 193..233
e-value: 1.7E-8
score: 44.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 193..233
score: 11.692616
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 168..252
e-value: 2.2E-15
score: 58.4
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 193..233
e-value: 1.9E-8
score: 34.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..115
NoneNo IPR availableCDDcd16536RING-HC_RNF10coord: 193..234
e-value: 1.08545E-17
score: 73.7525
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 191..244
IPR039739RING-finger protein Mag2/Rnf10PANTHERPTHR12983RING FINGER 10 FAMILY MEMBERcoord: 24..275
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 208..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15488contigP-wetherbeei_contig15488:264..1444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15488.1.1mRNA_P-wetherbeei_contig15488.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15488 264..1444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15488.1.1 ID=prot_P-wetherbeei_contig15488.1.1|Name=mRNA_P-wetherbeei_contig15488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
METKDALCSRGASSFPDNSTVRTRDQGKPASFLVRHQHSGAAGARERDMS
SSRDRRREKRGVGAQGRRNRAGVGNANHLLNFQFTPPQPQSFSAYSHSPP
RRQARDRRGGGGGGAGAFGSFRRREQFLQANFKFALLPLCDRSHEAFYDP
DTLVDWSAVDVVQEATDTAGAAAAAVATAEDTEAGDADPGWRCPICLDAP
RCPRITKCGHVFCAWCILRHLAGGDGVRRCPMCFESVSREALRGAERRIL
GVPAVGQPTTFFLLRRERPCLVPEAADELLPPRAAADGSGNSGGSGGVGT
GANHAVGSTSGVGRNGRKTGGGGGNGGGRADDGLAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR039739Mag2/Rnf10
IPR017907Znf_RING_CS