prot_P-wetherbeei_contig15383.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15383.1.1
Unique Nameprot_P-wetherbeei_contig15383.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length243
Homology
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 184 bits (468), Expect = 9.460e-50
Identity = 100/168 (59.52%), Postives = 126/168 (75.00%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 168
            VANKL  WS IGRLR+++ P++  D         + AGRILCDTYK+A+EFLR ETTYSL++LA+ QL  +RA+VDP DVPR F+  A  I+ LA  T  DA LVQ LMFKLQV+PLTKQLT I+GNLWS T +G RA+RI++LLLHEFH+LK++ PE R F+D  K+
Sbjct:  540 VANKLPNWSLIGRLRKSKEPKSINDRD-------VTAGRILCDTYKAAKEFLR-ETTYSLTYLASSQLKKERAEVDPIDVPRYFST-ANDIIGLAWHTYRDAWLVQGLMFKLQVVPLTKQLTCISGNLWSRTIKGARAERIEYLLLHEFHSLKYILPE-RKFQDNSKN 697          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.010e-43
Identity = 92/161 (57.14%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    4 KLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQ--RADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAF 162
            K+  W KIGRLRR + P   G + ++     + AGR++ DTY +A+E LR ETTYSL HLA  QL     RA +DP  VP  F + A  IV LAQ TAFDA LVQRL  +LQ++PLTKQLTNI+GNLW+ T +G RA+RI++LLLHEFH LK+VTPE+RAF
Sbjct:  733 KVSVWHKIGRLRRAKFPNPKG-LARDINLFGLTAGRLMADTYLTAREHLR-ETTYSLGHLATTQLRLPHPRAQIDPLQVPSFFGS-AKLIVNLAQHTAFDAQLVQRLCLRLQLVPLTKQLTNISGNLWARTIKGNRAERIEYLLLHEFHNLKYVTPERRAF 890          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S1YR22_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR22_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.270e-43
Identity = 88/169 (52.07%), Postives = 112/169 (66.27%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTRPP-----RAFGDVGKESFHTA-IAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFK 163
            V  K+  WSK+GR RRT  P      +F   G E++      +GR++CDTY S+QE LR ETTYSL +LA  QL   R +++  DVP+ F      IV LA+ T FDA LVQRLMFKLQV+PLTKQLT I GNLW  T +G RA+R ++LLLHEFH  K++ PE+R +K
Sbjct:   94 VETKVMIWSKLGRRRRTALPSISYLNSFKKGGGENYALVETLSGRLVCDTYVSSQELLR-ETTYSLQNLAMTQLKTNRVEIEQVDVPQWFDKSVN-IVNLAKHTLFDAQLVQRLMFKLQVLPLTKQLTCIAGNLWMRTLKGQRAERNEYLLLHEFHGRKYIVPERRNYK 260          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.050e-43
Identity = 96/170 (56.47%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 168
            V  K+G WSKIGR R+ R P A  FG+ GKE        GRILCDTY SA+EFLR ETTYSL++LA+ QL   R +++   VP     G    V+LAQ T  DA LVQ LMFKLQV+PLTKQLTNI GNLW  T +G RA+R ++LLLHEFH LK++ PEKR  K + +D
Sbjct:  729 VELKVGMWSKIGRRRQMRLPPASQFGN-GKEWAIANALDGRILCDTYLSAKEFLR-ETTYSLTNLASTQLKFAREEIEQESVPEFCKTGTN-FVKLAQHTLNDAQLVQNLMFKLQVLPLTKQLTNIAGNLWGRTMKGNRAERNEYLLLHEFHQLKYLVPEKRTAKQRLED 895          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS)

HSP 1 Score: 162 bits (411), Expect = 4.160e-42
Identity = 93/170 (54.71%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 168
            V  K+  WSKIGR R+ + P A  FG+ GKE        GRILCDT  SA+E LR ETTYSL++L   QL  QR +++P DVP+    G    V LAQ T  DA LVQRLMFKLQ++PLTKQLTNI GNLW+ T +G RA+R ++LLLHEFH LK++ PEKR  K + ++
Sbjct:  321 VELKVSMWSKIGRRRQMKLPNATQFGN-GKEWAIANALDGRILCDTCISAKELLR-ETTYSLTNLTLTQLKMQRVEIEPVDVPKWCRDGK-HFVSLAQHTLNDAQLVQRLMFKLQILPLTKQLTNIAGNLWARTMKGNRAERNEYLLLHEFHNLKYLVPEKRTAKQRSEE 487          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S3P4V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4V5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.060e-41
Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRA 161
             A+KL +WS++GR R+T  P+  G +   +   A+  GR+LCDTY SA+E LR ETTYSL+ LAA QL   R +++  D+P  FA   G +  +   T  DA LVQ+L FKLQ +PLTKQLTNI GNLWS T +  RA+R ++LLLHEFH LK++ PEK+A
Sbjct:   66 AAHKLKSWSQMGRRRQTALPK--GPIKDWAIAQAMT-GRLLCDTYLSAKELLR-ETTYSLTALAASQLQTARPEIESVDLPLYFATAKG-VTDVCHSTLLDAQLVQKLAFKLQTLPLTKQLTNIAGNLWSHTLKSNRAERTEYLLLHEFHRLKYLPPEKKA 221          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S1UP17_9STRA (DNA polymerase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UP17_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.580e-41
Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEK 167
            V  K+  WSK+GR R+T+ PP +    GK+        GR+LCDTY SA++ LR ETTYSL++LAA QL   R D++P D+P+ F      IV LA+ T  DA LVQRL+FKLQ++PLTKQLT + GNLW  T +G RA+R ++LLLHEFH+LK++ PEK+   +K++
Sbjct:  341 VELKVPLWSKVGRRRKTKLPPLSHFASGKDWAIADAIQGRLLCDTYLSAKDLLR-ETTYSLTNLAATQLKTLRQDIEPQDIPQWFHTSK-DIVHLARHTLHDAELVQRLLFKLQILPLTKQLTCVAGNLWGRTLKGNRAERNEYLLLHEFHSLKYLPPEKKRKGEKQE 506          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S4IIV6_9STRA (DNA polymerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIV6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.030e-41
Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 0
Query:    4 KLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDK 165
            K+  WSKIGRLR T  P+   F   GK+        GRIL DTY SA+E LR ETTYSL +LA  QL   + D+DP DVPR F + +  I+ LA+ T  DA LVQ+LMFKLQV+PLTKQLT I GNLWS T +G RA+R ++LLLHEFH LK++ PEK   ++K
Sbjct:  604 KVKLWSKIGRLRNTTLPKPSQFHGNGKDWAVGNALRGRILADTYLSAKELLR-ETTYSLKNLAKSQLKTFKEDIDPVDVPRWFNSSS-DIISLAKHTLRDAELVQKLMFKLQVLPLTKQLTCIAGNLWSHTVKGNRAERNEYLLLHEFHQLKYIVPEKERSRNK 765          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S4EF44_9STRA (DNA polymerase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF44_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.170e-41
Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKD 164
            + +K+  WSK GR R+T  P + +   GK+       +GR+LCDTY SAQE L  ETTYSL++LA  QL   R +++P D P+ F      IV LA+ T  DA LVQRLMFKLQ++PL+KQLTNI GNLWS T +  RA R ++LLLHEFH LKFV PEKR  K+
Sbjct:  819 IEHKVRMWSKFGRQRQTDLPSKTYFSNGKDWAIARAISGRLLCDTYLSAQEHLN-ETTYSLTNLAKTQLKTDRREIEPMDTPQYFHKSE-TIVALARHTLNDAQLVQRLMFKLQILPLSKQLTNIAGNLWSQTLKSNRAGRTEYLLLHEFHRLKFVVPEKRQGKN 981          
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A448Z9Q9_9STRA (DNA-directed DNA polymerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9Q9_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.300e-41
Identity = 89/169 (52.66%), Postives = 114/169 (67.46%), Query Frame = 0
Query:    1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 168
            V +K+  WSK GR R+T  P + +   GK+   +   +GR+LCDTY SAQE L  ETTYSL++LA  QL   R +++P D P+ F      IV LA+ T  DA LVQRLMFKLQ++PLTKQLTNI GNLWS T +  RA R ++LLLHEFH LK++ PEK   K K++D
Sbjct: 1267 VEHKVRMWSKFGRQRKTELPSKTYFSSGKDWAISEAISGRLLCDTYLSAQEHLN-ETTYSLTNLAKTQLRTDRQEIEPMDTPQYFHKSE-TIVALARHTLNDAQLVQRLMFKLQILPLTKQLTNIAGNLWSQTMKSNRAGRTEYLLLHEFHRLKYLVPEKH--KGKKED 1431          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482T3C7_9ARCH9.460e-5059.52DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A4D9CVK1_9STRA2.010e-4357.14DNA polymerase n=1 Tax=Nannochloropsis salina CCMP... [more]
A0A7S1YR22_9STRA3.270e-4352.07DNA-directed DNA polymerase (Fragment) n=1 Tax=Dit... [more]
A0A7S2L169_9STRA5.050e-4356.47DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=2... [more]
B8LEG9_THAPS4.160e-4254.71DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A7S3P4V5_9STRA1.060e-4151.55Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S1UP17_9STRA1.580e-4151.19DNA polymerase (Fragment) n=1 Tax=Grammatophora oc... [more]
A0A7S4IIV6_9STRA2.030e-4155.49DNA polymerase n=1 Tax=Odontella aurita TaxID=2655... [more]
A0A7S4EF44_9STRA5.170e-4153.33DNA polymerase n=1 Tax=Pseudo-nitzschia australis ... [more]
A0A448Z9Q9_9STRA5.300e-4152.66DNA-directed DNA polymerase n=1 Tax=Pseudo-nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..184
e-value: 5.0E-47
score: 162.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..217
NoneNo IPR availablePANTHERPTHR45861DNA POLYMERASE ALPHA CATALYTIC SUBUNITcoord: 3..183
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15383contigP-wetherbeei_contig15383:76..1570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15383.1.1mRNA_P-wetherbeei_contig15383.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15383 74..1570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15383.1.1 ID=prot_P-wetherbeei_contig15383.1.1|Name=mRNA_P-wetherbeei_contig15383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQE
FLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAF
DAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFH
ALKFVTPEKRAFKDKEKDGGAGSKGKGGSSKKKGGGGGGGGGGGGGGSGG
GGGDGDRHTRAGWFWSPRRASMTRSSCCLTSRHSTRPLSRSTT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf