prot_P-wetherbeei_contig15374.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15374.2.1
Unique Nameprot_P-wetherbeei_contig15374.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length91
Homology
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A7S1ZPN1_TRICV (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPN1_TRICV)

HSP 1 Score: 105 bits (261), Expect = 1.890e-26
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    2 QVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            Q++VGHGGTLDP+A GVLV+ VG+G ++L+ YL G K Y     LG ETDTLD+ G  T T P+EHV+  ++ G LP+F G IMQ+
Sbjct:   68 QIKVGHGGTLDPMATGVLVVGVGSGTKELQGYLSGSKKYVASVRLGEETDTLDTEGNVTKTVPFEHVTMEEIRGCLPKFTGKIMQI 153          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: F0YN09_AURAN (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN09_AURAN)

HSP 1 Score: 102 bits (253), Expect = 8.730e-25
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    2 QVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQ 86
            +V+VGHGGTLDPLA GVLV+ VG G R+++ YL+G K Y   A LG ETDTLD+ G   + AP++HV+   LE ALP F GDI Q
Sbjct:   37 KVKVGHGGTLDPLARGVLVVGVGRGCREMQGYLKGAKRYRAVAELGKETDTLDAEGAVVEEAPFDHVTLDALEAALPAFTGDIRQ 121          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A835Z9D0_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.690e-24
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    1 LQVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            ++++VGHGGTLDP+A GVLV+ +G+G ++LE YL+G K Y+    LG+ETDTLDS G  T+   W HV+   L  AL +F GDIMQV
Sbjct:   66 VKIKVGHGGTLDPMATGVLVLGIGSGTKELEKYLQGAKGYSAVGILGSETDTLDSEGQETEAMEWSHVTRDALMQALEQFRGDIMQV 152          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A813HPZ2_POLGL (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HPZ2_POLGL)

HSP 1 Score: 95.9 bits (237), Expect = 8.640e-23
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    4 EVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            +VGHGGTLDP A GVLV+ +G+G R +  +L G KAY    T+G+ETDT D+SG    TAP+EHV+   +E  +P+F G+I+QV
Sbjct:   47 KVGHGGTLDPEATGVLVLGIGSGTRMMTSFLHGSKAYEATVTMGSETDTEDASGKVVATAPFEHVTKEKMEEIMPQFLGEILQV 130          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A7S1VF52_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VF52_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 9.580e-23
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    3 VEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSAT--DLEGALPRFCGDIMQV 87
            V+VGHGGTLDPLA GVL I VG+G +QL+ YL G K Y  RA  G ETDTLD  G  T  AP++H+S T   +E  LP+F G I Q+
Sbjct:   22 VKVGHGGTLDPLATGVLAIGVGSGTKQLQSYLTGPKGYFARAEFGFETDTLDMGGNVTKRAPFDHISNTKEQIEEVLPKFTGTIQQI 108          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A7S2WB30_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB30_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.040e-22
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    1 LQVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            ++V+VGHGGTLDPLA GVLV+ VG G +QL DYL G K Y     LGAET+TLD+ G   +  P +HV+   L GALP F GDI QV
Sbjct:   67 VKVKVGHGGTLDPLATGVLVLGVGGGCKQLTDYLSGSKRYRALGRLGAETETLDTEGKVVEECPADHVTPEALLGALPDFRGDIEQV 153          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A7S2UD96_9STRA (tRNA pseudouridine(55) synthase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD96_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.570e-22
Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 LQVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSAT----DLEGALPRFCGDIMQV 87
            L + VGHGGTLDPLA GVLVI VG G +QL+ YL G K YT  A LG ET TLD  G  T + PWE +S +     LE  LP+F G I QV
Sbjct:  135 LMIRVGHGGTLDPLATGVLVIGVGKGTKQLQQYLNGNKRYTASAELGYETTTLDLEGNITKSVPWEQISDSIEIKSLEAILPQFKGTIQQV 225          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A7S2MBG8_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBG8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.590e-22
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    1 LQVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            ++V+VGHGGTLDPLA GVLV+ +G G RQL DYL G K Y     LG +TDTLDS G      PW+HV+   L  AL  F G+I+Q+
Sbjct:   83 VKVKVGHGGTLDPLATGVLVLGIGKGCRQLTDYLAGAKRYRAVGKLGMKTDTLDSLGEAVAEKPWDHVTDAQLSDALEAFRGEILQI 169          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A1Z5K540_FISSO (tRNA pseudouridine(55) synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K540_FISSO)

HSP 1 Score: 95.1 bits (235), Expect = 8.020e-22
Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    2 QVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
            ++++GHGGTLDPLA GVLV+ VG G +QLE YL G KAY   A LG ET+TLD  G  T  A ++H+   DLE   P F G I Q+
Sbjct:   69 RIKIGHGGTLDPLATGVLVLGVGKGTKQLESYLSGSKAYRAGAALGFETNTLDMEGNITRRATFDHIQPIDLERVRPHFVGTIEQI 154          
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Match: A0A0D2MSW8_HYPSF (tRNA pseudouridine(55) synthase n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2MSW8_HYPSF)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-21
Identity = 47/86 (54.65%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    2 QVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAETDTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQV 87
             V++G GGTLDPLA GVLVI VG G ++L D+L   K Y     LG ETDT DS GV    APW+HVS   +E ALP+F G+I Q+
Sbjct:   67 SVKIGQGGTLDPLADGVLVIGVGKGTKKLNDFLNCTKEYETTCLLGCETDTYDSEGVRVRLAPWQHVSREKVEAALPQFQGEITQI 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15374.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1ZPN1_TRICV1.890e-2654.65tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
F0YN09_AURAN8.730e-2557.65tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A835Z9D0_9STRA9.690e-2454.02tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A813HPZ2_POLGL8.640e-2352.38tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A7S1VF52_9STRA9.580e-2356.32tRNA pseudouridine(55) synthase n=1 Tax=Grammatoph... [more]
A0A7S2WB30_9STRA1.040e-2257.47tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A7S2UD96_9STRA2.570e-2256.04tRNA pseudouridine(55) synthase n=2 Tax=Attheya se... [more]
A0A7S2MBG8_9STRA5.590e-2254.02tRNA pseudouridine(55) synthase n=1 Tax=Dictyocha ... [more]
A0A1Z5K540_FISSO8.020e-2253.49tRNA pseudouridine(55) synthase n=1 Tax=Fistulifer... [more]
A0A0D2MSW8_HYPSF1.390e-2154.65tRNA pseudouridine(55) synthase n=1 Tax=Hypholoma ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 5..87
e-value: 3.7E-22
score: 79.3
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 2..90
e-value: 5.7E-27
score: 96.5
IPR014780tRNA pseudouridine synthase II, TruBPANTHERPTHR13767TRNA-PSEUDOURIDINE SYNTHASEcoord: 4..87
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 3..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15374contigP-wetherbeei_contig15374:1075..1347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15374.2.1mRNA_P-wetherbeei_contig15374.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15374 1075..1347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15374.2.1 ID=prot_P-wetherbeei_contig15374.2.1|Name=mRNA_P-wetherbeei_contig15374.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp
LQVEVGHGGTLDPLAIGVLVIRVGTGYRQLEDYLRGRKAYTCRATLGAET
DTLDSSGVFTDTAPWEHVSATDLEGALPRFCGDIMQVMHA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002501PsdUridine_synth_N
IPR014780tRNA_psdUridine_synth_TruB
IPR020103PsdUridine_synth_cat_dom_sf