prot_P-wetherbeei_contig15235.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15235.1.1
Unique Nameprot_P-wetherbeei_contig15235.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length197
Homology
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A836CIH7_9STRA (Protein in complex with Mn, Zn, and Amp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH7_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.030e-61
Identity = 114/197 (57.87%), Postives = 137/197 (69.54%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARARA 197
            FDTG+AAR L LPS   A+ L  +CG  ADK+HQL DWRVRPLP  ML YA +DTHYLL++ DRLR  L   G   A+  VL++SR LC +RYEKE F P G+  VLQR G      A  L   Q+  MAALW+WRDA AR EDES GYVMSAY+M R+A   PAS DAL RC  PLPPL+++R++EV+AL+A A A
Sbjct:  162 FDTGRAARTLDLPSRGLAYALKEFCGFEADKKHQLGDWRVRPLPPAMLKYAQADTHYLLHVYDRLRAML---GTPEAIAQVLESSRELCLQRYEKEAFDPEGWRRVLQRIGGE---GAGALDSAQQARMAALWDWRDALAREEDESPGYVMSAYLMLRLARAAPASHDALVRCAAPLPPLVQQRSDEVIALLAAAAA 352          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 3.410e-52
Identity = 102/196 (52.04%), Postives = 128/196 (65.31%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 196
            FDTGQAAR LGLPSF  AHLL+++C  + DK+HQLSDWR+RPLPA+MLL                  +L   GG VA++ VLDASR +C RR+EK  F+  G+  VL+RQG        +     RRV++ALW WRD  AR EDES GYVMSAYVM RVA   P+S D L  CGNPLP L+++ AE++L +V  A+
Sbjct:  413 FDTGQAARQLGLPSFGLAHLLEKFCDFVPDKKHQLSDWRMRPLPADMLLI-----------------DLERSGGDVAVKAVLDASREICLRRFEKPAFQEKGWSEVLKRQGG--NGVLDDFGDVPRRVLSALWSWRDMIARAEDESYGYVMSAYVMIRVARKCPSSRDDLEGCGNPLPRLVQQHAEDILEIVENAK 589          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: F6R4R6_CIOIN (HRDC domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6R4R6_CIOIN)

HSP 1 Score: 166 bits (419), Expect = 2.280e-47
Identity = 87/196 (44.39%), Postives = 120/196 (61.22%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 196
            FDTGQAAR LGL   S  +LL  YC V ADK++QL+DWR+RPLP EMLLYA  DTHYLLY+ D +R +L   G    L  V+D SR +C  +YEK     + +  +L++  H+      +   +Q   +  ++ WRD  AR+EDES GYV+  +++ ++A +LP  A  +  C NP+PPLLR+    V  LV  AR
Sbjct:   87 FDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPLPKEMLLYAQGDTHYLLYVYDMMRLDLVKTGDPGLLHKVIDKSRDICCLKYEKPITNDTSHLVLLEK--HKRRGGKKDFRPQQIEALRLIFAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLACCNPIPPLLRQHVLAVHQLVVEAR 280          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A0L0D0X9_THETB (Exosome component 10 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D0X9_THETB)

HSP 1 Score: 174 bits (442), Expect = 4.510e-47
Identity = 98/198 (49.49%), Postives = 125/198 (63.13%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAV--ALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASA-DALGRCGNPLPPLLRERAEEVLALVARA 195
            FDTGQAAR L  PSF  AHLL  YC V  +K +QL+DWR+RPLP +M  YA  DTHYLLYI DRL+ EL ARG      +  VL  SR +CG  YEK  F P  +  V +R       ++  LS EQR V AAL++WRDA AR+ DES GYVM   +++R+A  +P    D L  C NP+PPL+R+ A +++ +V  A
Sbjct:  346 FDTGQAARVLAYPSFGLAHLLKFYCSVNTNKSYQLADWRIRPLPEDMAKYARMDTHYLLYIYDRLKNELVARGSVSNNLVAAVLARSREICGFVYEKPAFTPDAWRRVYER-------SSTRLSSEQRAVFAALYDWRDAQARKLDESTGYVMPNALLARLAHAMPTRVGDLLAAC-NPIPPLVRQHAMDIVQVVVAA 535          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: L8H2P3_ACACA (3'5' exonuclease domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2P3_ACACA)

HSP 1 Score: 167 bits (423), Expect = 1.840e-44
Identity = 92/199 (46.23%), Postives = 128/199 (64.32%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAV--ALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARARA 197
            FDTGQA R L  PSFS A+LL  +CGV+ADK++QL+DWR+RPLP EML YA  DTHYLL+I D+LR EL  R       +  VL+ SR LC  +YEK  + P+ + ++  R  +         + +Q RV AA+++WRD  AR EDES  YV+  +++  +A ++P S  AL  C NP+PPL+R  AE ++ ++  ARA
Sbjct:  357 FDTGQACRVLEYPSFSLAYLLRHHCGVLADKKYQLADWRIRPLPEEMLKYAREDTHYLLFIYDKLRNELIGRANMSNNLILAVLNRSRELCLLQYEKPLWTPTSHLSLYNRFNY-------VFNEQQMRVFAAVYKWRDTVAREEDESYRYVLPNHMLFHIAELVPTSVPALLACCNPVPPLVRINAEILVDVITAARA 548          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: H2ZCV9_CIOSA (HRDC domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZCV9_CIOSA)

HSP 1 Score: 164 bits (416), Expect = 2.070e-44
Identity = 87/196 (44.39%), Postives = 122/196 (62.24%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 196
            FDTGQA+R LGL  FS   LL  YC + ADK++QL+DWRVRPLP EMLLYA  DTHYLLY+ D ++ +L  + G   L  VL+ SR +C  +YEK     S +  ++++Q  R      + + +Q   +  ++ WRD  AR+EDES GYV+  +++ ++A +LP  A  +  C NP+PPLLR+    V  LV  AR
Sbjct:  355 FDTGQASRALGLARFSLDFLLTHYCNIQADKKYQLADWRVRPLPKEMLLYAQGDTHYLLYVYDMMKIDL-LKAGTGMLEKVLEKSREICLLKYEKAVTTASSHLALMEKQKRR--GGKKDFNSQQLEALRLIYAWRDGLARQEDESCGYVLPNHMLLQIAEILPREAQGVLACCNPVPPLLRQHVLAVHQLVLEAR 547          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: K1QSH5_CRAGI (Exosome component 10 (Fragment) n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QSH5_CRAGI)

HSP 1 Score: 157 bits (398), Expect = 4.940e-44
Identity = 83/198 (41.92%), Postives = 123/198 (62.12%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVA--LRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 196
            FDTGQAAR L    FS AHL++ YC V+ DK++QL+DWR+RPLPAE++ YA  DTHYL YI  R++ EL ARG      L +VL  S  +C + Y+K+ F+   Y   L R+  ++       +  Q + +  L++WRD  AR+EDES GYV+  +++ ++A +LP     +  C NP+PPL+R+   E+ + +  AR
Sbjct:  110 FDTGQAARVLNHSRFSLAHLMEHYCDVITDKQYQLADWRIRPLPAELMKYAREDTHYLTYIYQRMKQELLARGNDQKNLLLSVLQRSTEICAKVYKKQVFKEDSY-LELYRKSKKV------FNSRQLQALQKLYQWRDKLARQEDESTGYVLPNHMILQIADILPREQQGIFACCNPIPPLVRQFLPEIHSFILEAR 300          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A7S4T666_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T666_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.350e-43
Identity = 88/193 (45.60%), Postives = 121/193 (62.69%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGA-VALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALV 192
            FDTG+A+R L  PS   A+LL +Y GV+ADK+HQLSDWR RPLP +M  YA SDT YLL I DRL+ EL       V++ +VLD SR +C  RY+KE F PSGY ++++    + + A  + S +Q   + AL++WRD  AR EDES+ Y      + R+A   P +   L    NPLPPL+   ++EVL ++
Sbjct:  246 FDTGRASRMLKFPSAGLAYLLSKYAGVIADKKHQLSDWRQRPLPEDMKAYATSDTLYLLDIYDRLKLELDTNSNVDVSVESVLDTSRKICLIRYDKEAFCPSGYQSLMK--WKKRSKATTSFSTKQENTLKALYDWRDKVAREEDESVQYTCPNSALLRIATARPHNVITLQGLVNPLPPLVLRHSQEVLNVI 436          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: A0A812X250_SYMMI (Exosc10 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X250_SYMMI)

HSP 1 Score: 160 bits (404), Expect = 4.200e-43
Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRPSGYDTVL-QRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVL 189
            FDT  AA+ L  P+ S AHLL  +CG+  +K+HQL+DWR+RPLP +ML YA SDTHYLLYI D LR +++   G  AL  V  AS   C +RYEKEPF P GY  +    +G     AA ++S EQ   +A+LW WRD+ ARREDES  ++MS   + R+   +P + ++L  C +PL   +R    +++
Sbjct:  250 FDTYHAAKALRYPALSLAHLLKYHCGITLNKKHQLADWRIRPLPEDMLCYARSDTHYLLYIYDCLRRDIYTAQGVSALLAVWMASMHTCLKRYEKEPFYPLGYTRLFTDSRGWSGAPAAVDVSPEQHIALASLWSWRDSMARREDESPLFIMSNAELLRIGRAIPLTEESLLEC-SPLSAFVRAHMNDLM 438          
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Match: Q99KY7_MOUSE (Exosc10 protein (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=Q99KY7_MOUSE)

HSP 1 Score: 160 bits (404), Expect = 4.260e-43
Identity = 89/198 (44.95%), Postives = 121/198 (61.11%), Query Frame = 0
Query:    1 FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLYACSDTHYLLYIADRLRTELHARGG--AVALRTVLDASRMLCGRRYEKEPFRPSGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYVMSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARAR 196
            FDT QAAR L L   S  HLL  YCGV ++K++QL+DWR+RPLP EML YA  DTHYLLYI DR+R EL  RG    V L+ V   SR +C +++ K  F    Y  + ++Q         +L+ +Q      L+ WRD TARREDES GYV+  ++M ++A  LP     +  C NP+PPL+R++  E+  L+ +AR
Sbjct:   17 FDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDRMRLELWERGNHQPVQLQVVWQRSRDICLKKFVKPIFTDESYLELYRKQ-------KKHLNSQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAR 207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15235.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIH7_9STRA1.030e-6157.87Protein in complex with Mn, Zn, and Amp n=1 Tax=Tr... [more]
D8LQE8_ECTSI3.410e-5252.04HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
F6R4R6_CIOIN2.280e-4744.39HRDC domain-containing protein n=2 Tax=Ciona intes... [more]
A0A0L0D0X9_THETB4.510e-4749.49Exosome component 10 n=1 Tax=Thecamonas trahens AT... [more]
L8H2P3_ACACA1.840e-4446.233'5' exonuclease domain containing protein n=1 Tax... [more]
H2ZCV9_CIOSA2.070e-4444.39HRDC domain-containing protein n=1 Tax=Ciona savig... [more]
K1QSH5_CRAGI4.940e-4441.92Exosome component 10 (Fragment) n=1 Tax=Crassostre... [more]
A0A7S4T666_9STRA2.350e-4345.60Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A812X250_SYMMI4.200e-4345.26Exosc10 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
Q99KY7_MOUSE4.260e-4344.95Exosc10 protein (Fragment) n=1 Tax=Mus musculus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002121HRDC domainSMARTSM00341hrdc7coord: 122..197
e-value: 2.0E-8
score: 44.0
IPR002121HRDC domainPFAMPF00570HRDCcoord: 125..192
e-value: 9.7E-13
score: 47.9
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 122..197
score: 15.409067
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 1..69
e-value: 3.0E-14
score: 53.1
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 110..197
e-value: 2.6E-22
score: 80.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..109
e-value: 1.9E-33
score: 117.8
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..194
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..101
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 113..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15235contigP-wetherbeei_contig15235:2..592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15235.1.1mRNA_P-wetherbeei_contig15235.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15235 2..592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15235.1.1 ID=prot_P-wetherbeei_contig15235.1.1|Name=mRNA_P-wetherbeei_contig15235.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp
FDTGQAARYLGLPSFSYAHLLDRYCGVMADKRHQLSDWRVRPLPAEMLLY
ACSDTHYLLYIADRLRTELHARGGAVALRTVLDASRMLCGRRYEKEPFRP
SGYDTVLQRQGHRLTAAAANLSGEQRRVMAALWEWRDATARREDESLGYV
MSAYVMSRVAAVLPASADALGRCGNPLPPLLRERAEEVLALVARARA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR0025623'-5'_exonuclease_dom
IPR044876HRDC_dom_sf
IPR036397RNaseH_sf
IPR045092Rrp6-like
IPR012337RNaseH-like_sf
IPR010997HRDC-like_sf