prot_P-wetherbeei_contig15064.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15064.1.1
Unique Nameprot_P-wetherbeei_contig15064.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length153
Homology
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.400e-63
Identity = 110/152 (72.37%), Postives = 128/152 (84.21%), Query Frame = 0
Query:    2 VTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            VTN L+ AVK+KAVGM+LV GV+  QQF+ VM DELV +MG +QAPLARRTDGKPTV+LLAGLQG GKTTAA KLAKY   E+ P+KVLLVAGD+YRPAAI+QL +LG+ IDVEVFSMG+   PV+I KAGL  AV G++DTVIVDTAGRQV
Sbjct:  141 VTNTLVDAVKSKAVGMKLVDGVTAKQQFVNVMNDELVEIMGAEQAPLARRTDGKPTVILLAGLQGTGKTTAAAKLAKYLQQEEEPKKVLLVAGDVYRPAAIDQLISLGKRIDVEVFSMGQGVDPVEITKAGLERAVEGEFDTVIVDTAGRQV 292          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A6V3B529_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3B529_HETAK)

HSP 1 Score: 179 bits (455), Expect = 6.240e-51
Identity = 103/159 (64.78%), Postives = 120/159 (75.47%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLAR--RTDG----KPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +VTNDLIKAVK KA+GME+ +GV+  QQF+KVM DELV ++G   A LAR  R D     +PTV+LLAGLQGAGKTTAA KLA YC GE   R+ LL A D+YRPAAI+QL+TLG  I VEVFS G D  PV+IA+A +A A A  YDTVIVDTAGRQV
Sbjct:  110 KVTNDLIKAVKKKALGMEVTKGVTPEQQFVKVMGDELVRILGGAVAELARGDRVDALGQPEPTVILLAGLQGAGKTTAAGKLALYCKGEAQGRRPLLCAADVYRPAAIDQLKTLGGRIGVEVFSQGTDADPVEIARAAVAHAKAQGYDTVIVDTAGRQV 268          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.350e-50
Identity = 102/180 (56.67%), Postives = 122/180 (67.78%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRT-DGKPTVVLLAGLQGAGKTTAAVKLAKYCLG--------------------------EDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +VTN LI++V+ +AVG  L++GV+  QQF+K+MYDELV VMG +QAPLAR T +G+P V+LLAGLQGAGKTTAA KLAK+C                            E PP KVLLVAGD+YRPAAIEQLQ LG  I  EVF+ GRD  PV IA+ G+  A  G +D VIVDTAGRQV
Sbjct:  105 KVTNGLIESVRNQAVGKLLIEGVTPDQQFVKIMYDELVKVMGSQQAPLARSTKEGEPVVILLAGLQGAGKTTAAAKLAKFCQERGAGVAPAEEPQPEMKEGEVWTPPQREGPPGKVLLVAGDVYRPAAIEQLQRLGERIGAEVFAPGRDVDPVDIARGGVQYARDGGFDAVIVDTAGRQV 284          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A5J4YVF1_PORPP (Signal recognition particle protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF1_PORPP)

HSP 1 Score: 177 bits (449), Expect = 4.380e-50
Identity = 94/155 (60.65%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDG--KPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +V N LIK VKA+A+G ++++GV   QQFIK++YDEL  +MG +  PLAR+      PTV+LLAGLQGAGKTTAA KLA YC  E  PR+VLL A D+YRPAAIEQL+TLG SID EVF+MG D  P +IA+  ++ A    +DTVIVDTAGRQV
Sbjct:  112 KVVNSLIKDVKARALGEKVLEGVKPGQQFIKIIYDELARIMGSEATPLARKDASAESPTVILLAGLQGAGKTTAAAKLALYCKSEAKPRRVLLCACDVYRPAAIEQLKTLGASIDTEVFAMGTDVEPERIAREAISYAKKNKFDTVIVDTAGRQV 266          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 175 bits (444), Expect = 4.460e-50
Identity = 89/153 (58.17%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +V N L+K +KA+AVG ++  GV   Q  +K+M++EL  +MG  QAPLA RTDG+PTVVLLAGLQGAGKTTAA KLA YCL E+  R V+++A D+YRPAAI+QL+TLG+SI+V+VF MG D  P +I + GL        +T+IVDTAGRQV
Sbjct:   31 RVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEE--RSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQV 181          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 174 bits (442), Expect = 1.160e-49
Identity = 91/153 (59.48%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +V N LIK +K +A+G E+V GV   Q  IK+M++EL  +MG+ QAPLA+R+DG+PTVVLLAGLQGAGKTTAA KLA YCL +   R V+L+AGD+YRPAAI+QL+TLG  I+V+VFSMG D  P  I + G+        DT+IVDTAGRQV
Sbjct:   47 RVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDK--RSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQV 197          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A6T5W5G4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5W5G4_9RHOD)

HSP 1 Score: 167 bits (423), Expect = 2.560e-46
Identity = 95/171 (55.56%), Postives = 115/171 (67.25%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYC-------LGED-----------PPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            +V N L+K V+ +AVGME++ GV+  QQF+K++Y+EL  VMG    PLA  T   P V+LLAGLQGAGKTTAA KLA YC       +G D           P +KVLLVA D+YRPAAIEQL+TLG  I+ EVFS+G +  P QIAK GL  A    +DTVIVDTAGRQV
Sbjct:   88 RVVNKLVKEVQQRAVGMEVLPGVTPGQQFVKIIYEELSRVMGADATPLASPTGSDPVVILLAGLQGAGKTTAAAKLALYCKAPPAPPVGADGAAQNAVVARAPAKKVLLVAADVYRPAAIEQLKTLGARIETEVFSLGTELSPEQIAKQGLEYARKNGFDTVIVDTAGRQV 258          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A0G4GPH7_VITBC (SRP54 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GPH7_VITBC)

HSP 1 Score: 166 bits (420), Expect = 3.530e-46
Identity = 96/175 (54.86%), Postives = 114/175 (65.14%), Query Frame = 0
Query:    1 QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCL--------------GEDP--------PRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            QV N L+KAVK KAVG   +  V+ +QQF+K++YDELV +MG  +AP+A     +PTV+LLAGLQGAGKTTAA KLA Y                GE          PRKVLLVA D+YRPAAI+QLQ LG  +  EVF+MG+D  PV I K G+A A    YDTVIVDTAGRQV
Sbjct:   47 QVANSLVKAVKEKAVGERRIDNVNPSQQFVKILYDELVDIMGGDEAPIATSATDQPTVLLLAGLQGAGKTTAAAKLALYLQTPQTRLDASGDAEGGEGEGGKGTMTKPRKVLLVAADVYRPAAIDQLQILGERVGCEVFTMGQDVDPVDIVKQGVAYAKEQGYDTVIVDTAGRQV 221          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A6I5P0P2_9CYAN (Signal recognition particle protein (Fragment) n=1 Tax=Leptolyngbya sp. SIO3F4 TaxID=2607780 RepID=A0A6I5P0P2_9CYAN)

HSP 1 Score: 157 bits (396), Expect = 2.460e-45
Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 0
Query:    2 VTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGR 151
            V  D +  V+ KA G E+V+GV+  QQFIK++YDELV +MGE   PL+   D KPTVVL+AGLQG GKTTA+ KLA +   ++  R  +LVA D+YRPAA++QL TLG+ IDV VF MG D  PV IAKAG+A A     DTVIVDTAGR
Sbjct:   47 VVKDFVAEVQEKAQGAEVVRGVAPDQQFIKIVYDELVTLMGEANEPLSD-ADSKPTVVLMAGLQGTGKTTASAKLALHLRKQE--RSAMLVATDVYRPAAVDQLITLGKQIDVPVFEMGTDANPVDIAKAGIAKAKEDGIDTVIVDTAGR 193          
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Match: A0A7S0VH70_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VH70_9CRYP)

HSP 1 Score: 157 bits (398), Expect = 2.760e-44
Identity = 88/152 (57.89%), Postives = 109/152 (71.71%), Query Frame = 0
Query:    2 VTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLARRTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPAAIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAGRQV 153
            V +++I+ ++ KA+G E+V GV  AQQF+KVM DEL  ++G +Q+PLA+  +G  T +LLAGLQG GKTTAA KLA YC  E+   KVLLVA D+YRPAAIEQLQTL   I  EVF  G +  P QIA+  L  A  G +DTVIVDTAGRQV
Sbjct:  131 VADEVIEGIRTKAIGTEVVDGVEPAQQFVKVMNDELTRILGGEQSPLAQ-VEGGMTKILLAGLQGTGKTTAAAKLALYCQ-ENRKSKVLLVACDVYRPAAIEQLQTLAAQIGAEVFQQGTEANPRQIAREALEYAKEGGFDTVIVDTAGRQV 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15064.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN22_ECTSI1.400e-6372.37PFfh, plastid Ffh subunit of the signal recognitio... [more]
A0A6V3B529_HETAK6.240e-5164.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YMH5_9STRA3.350e-5056.67SRP54-type protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A5J4YVF1_PORPP4.380e-5060.65Signal recognition particle protein n=1 Tax=Porphy... [more]
R7QHF1_CHOCR4.460e-5058.17Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A2V3IRY4_9FLOR1.160e-4959.48Signal recognition particle protein n=1 Tax=Gracil... [more]
A0A6T5W5G4_9RHOD2.560e-4655.56Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A0G4GPH7_VITBC3.530e-4654.86SRP54 domain-containing protein n=1 Tax=Vitrella b... [more]
A0A6I5P0P2_9CYAN2.460e-4558.00Signal recognition particle protein (Fragment) n=1... [more]
A0A7S0VH70_9CRYP2.760e-4457.89Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 56..153
e-value: 1.3E-8
score: -21.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 56..152
e-value: 4.2E-29
score: 101.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 45..153
e-value: 2.3E-30
score: 107.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..151
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 1..44
e-value: 6.8E-8
score: 34.2
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 1..152
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 1..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15064contigP-wetherbeei_contig15064:265..1354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15064.1.1mRNA_P-wetherbeei_contig15064.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15064 265..1354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15064.1.1 ID=prot_P-wetherbeei_contig15064.1.1|Name=mRNA_P-wetherbeei_contig15064.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
QVTNDLIKAVKAKAVGMELVQGVSGAQQFIKVMYDELVLVMGEKQAPLAR
RTDGKPTVVLLAGLQGAGKTTAAVKLAKYCLGEDPPRKVLLVAGDIYRPA
AIEQLQTLGRSIDVEVFSMGRDTPPVQIAKAGLAAAVAGDYDTVIVDTAG
RQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR027417P-loop_NTPase
IPR042101SRP54_N_sf
IPR022941SRP54
IPR004780SRP