prot_P-wetherbeei_contig15026.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig15026.1.1
Unique Name	prot_P-wetherbeei_contig15026.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	105

Homology

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A835ZDL4_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.010e-55
Identity = 82/105 (78.10%), Postives = 98/105 (93.33%), Query Frame = 0

Query:    1 LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            L+NTA+R K+PLRP SG+R+ FYSCGPTVYD AH+GNFRAFLTYDVLKRWL YRG++V+HVCNLTD+DDKII+RM RDGVGL+ELT++YA LFFEDLAALN++PA
Sbjct:   13 LYNTAARTKEPLRPLSGKRIAFYSCGPTVYDHAHIGNFRAFLTYDVLKRWLTYRGFEVDHVCNLTDIDDKIIRRMARDGVGLRELTDRYAALFFEDLAALNVVPA 117

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S0CUB0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CUB0_9EUKA)

HSP 1 Score: 177 bits (448), Expect = 1.360e-53
Identity = 80/108 (74.07%), Postives = 98/108 (90.74%), Query Frame = 0

Query:    1 LFNTASREK---QPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            L+NTA REK   +PL P+ G++VKFYSCGPTVYD AH+GNFRAFLTYD++KRWLLY GYDV+HVCNLTD+DDKI+QRM+RD + LK+LTNKY+DLFF+DLA+LN+IPA
Sbjct:    3 LYNTAQREKIKFEPLDPE-GKKVKFYSCGPTVYDFAHIGNFRAFLTYDLIKRWLLYLGYDVDHVCNLTDIDDKILQRMKRDDISLKDLTNKYSDLFFQDLASLNVIPA 109

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S3YUM7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YUM7_9EUKA)

HSP 1 Score: 173 bits (439), Expect = 1.920e-52
Identity = 80/105 (76.19%), Postives = 90/105 (85.71%), Query Frame = 0

Query:    1 LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            L+NTA+REK P  P +  RV FYSCGPTVYD AHVGNFRAFLTYD+LKRWL Y GYDV+HVCNLTD+DDKII RM RD V LK+LT KY+DLFFEDLA+LNI+PA
Sbjct:   55 LYNTATREKDPFVPANPPRVTFYSCGPTVYDFAHVGNFRAFLTYDLLKRWLKYLGYDVDHVCNLTDIDDKIINRMARDNVTLKDLTTKYSDLFFEDLASLNILPA 159

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: D7FX39_ECTSI (Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX39_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 4.690e-51
Identity = 81/105 (77.14%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            LFNT  R K+  RPQ  RRVKFYSCGPTVYD AH+GNFRAFLTYDVLKRWLLY+G++V+HVCNLTDVDDKII RM RDGV L+ELT KYA LFF+DL +LNI+PA
Sbjct:   21 LFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPA 125

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: L1I7X3_GUITC (Cysteine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I7X3_GUITC)

HSP 1 Score: 170 bits (431), Expect = 3.310e-49
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 LFNTASREKQPLRP--QSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            ++NT SR+K+   P  + G+ VK Y+CGPT+YD AH+GNFRAFLTYDVLKRWLLY GYDV+H+CNLTDVDDKIIQRM+RD VGLKELT K+AD FF+DL  LNIIPA
Sbjct:   24 IYNTLSRDKETFEPMCEDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPA 130

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S0EPZ0_9CRYP (Cysteine--tRNA ligase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EPZ0_9CRYP)

HSP 1 Score: 170 bits (430), Expect = 8.770e-49
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 LFNTASREKQPLRP--QSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            ++NT SR+K+   P  + GR VK Y+CGPT+YD AH+GNFRAFLTYDVLKRWLLY GY+V+H+CNLTDVDDKIIQRM+RD VGLKELT K+AD FF+DL  LNIIPA
Sbjct:   96 IYNTLSRDKETFEPMCEDGRTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYEVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPA 202

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: W7U426_9STRA (Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U426_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.650e-48
Identity = 77/105 (73.33%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            L+NTASR+K+P +     +V FYSCGPT+YD AH+GNFRAFLTYDVLKRWLLY GYDVEHVCNLTDVDDKII+RM RDG+ L ELT+K+A +FFEDL ALN++PA
Sbjct:   92 LYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPA 196

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S4UT40_GUITH (Cysteine--tRNA ligase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UT40_GUITH)

HSP 1 Score: 170 bits (431), Expect = 5.740e-48
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 LFNTASREKQPLRP--QSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            ++NT SR+K+   P  + G+ VK Y+CGPT+YD AH+GNFRAFLTYDVLKRWLLY GYDV+H+CNLTDVDDKIIQRM+RD VGLKELT K+AD FF+DL  LNIIPA
Sbjct:  130 IYNTLSRDKETFEPMCEDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPA 236

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S0Y1W6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y1W6_HEMAN)

HSP 1 Score: 162 bits (410), Expect = 6.030e-48
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 0

Query:    1 LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
             +NT +R+KQP  P    +V  Y+CGPTVYD AH+GNFRAFLTYD++KRWLLY G++V+HVCNLTDVDDKIIQRM+RD + LK+LTN+YAD F  DLA LN++PA
Sbjct:   91 FYNTLTRDKQPFEPIQQGKVSMYTCGPTVYDFAHIGNFRAFLTYDLIKRWLLYCGFEVDHVCNLTDVDDKIIQRMKRDKISLKDLTNRYADAFLSDLALLNVVPA 195

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BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Match: A0A7S2S4N2_9STRA (Cysteine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4N2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.400e-44
Identity = 72/100 (72.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    6 SREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRWLLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAALNIIPA 105
            SR K+P  P+   +V FYSCGPTVYD AH+GNFRAFLTYDVLKRWL + G+DVEHVCNLTD+DDKII R+ RDGV L+ELT+KYA  FFEDL ALN++PA
Sbjct:    1 SRSKEPFSPECPPKVSFYSCGPTVYDFAHIGNFRAFLTYDVLKRWLTFLGFDVEHVCNLTDIDDKIIARIARDGVSLQELTDKYAAAFFEDLDALNVMPA 100

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig15026.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZDL4_9STRA	7.010e-55	78.10	Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI...	[more]
A0A7S0CUB0_9EUKA	1.360e-53	74.07	Hypothetical protein (Fragment) n=1 Tax=Amorphochl...	[more]
A0A7S3YUM7_9EUKA	1.920e-52	76.19	Hypothetical protein n=1 Tax=Lotharella globosa Ta...	[more]
D7FX39_ECTSI	4.690e-51	77.14	Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculos...	[more]
L1I7X3_GUITC	3.310e-49	71.96	Cysteine--tRNA ligase n=1 Tax=Guillardia theta (st...	[more]
A0A7S0EPZ0_9CRYP	8.770e-49	71.96	Cysteine--tRNA ligase (Fragment) n=1 Tax=Hanusia p...	[more]
W7U426_9STRA	1.650e-48	73.33	Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxI...	[more]
A0A7S4UT40_GUITH	5.740e-48	71.96	Cysteine--tRNA ligase n=1 Tax=Guillardia theta Tax...	[more]
A0A7S0Y1W6_HEMAN	6.030e-48	66.67	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S2S4N2_9STRA	1.400e-44	72.00	Cysteine--tRNA ligase n=1 Tax=Rhizochromulina mari...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..105 e-value: 1.0E-37 score: 131.6
IPR032678	tRNA synthetases class I, catalytic domain	PFAM	PF01406	tRNA-synt_1e	coord: 14..104 e-value: 3.8E-29 score: 102.0
IPR024909	Cysteinyl-tRNA synthetase/mycothiol ligase	PANTHER	PTHR10890	CYSTEINYL-TRNA SYNTHETASE	coord: 1..104
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 2..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig15026	contig	P-wetherbeei_contig15026:8..501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig15026.1.1	mRNA_P-wetherbeei_contig15026.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig15026 8..501 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig15026.1.1 ID=prot_P-wetherbeei_contig15026.1.1|Name=mRNA_P-wetherbeei_contig15026.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp
LFNTASREKQPLRPQSGRRVKFYSCGPTVYDAAHVGNFRAFLTYDVLKRW
LLYRGYDVEHVCNLTDVDDKIIQRMQRDGVGLKELTNKYADLFFEDLAAL
NIIPA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR032678	tRNA-synt_1_cat_dom
IPR024909	Cys-tRNA/MSH_ligase