prot_P-wetherbeei_contig1490.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1490.5.1
Unique Nameprot_P-wetherbeei_contig1490.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length219
Homology
BLAST of mRNA_P-wetherbeei_contig1490.5.1 vs. uniprot
Match: A0A835ZIZ6_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIZ6_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.150e-41
Identity = 91/157 (57.96%), Postives = 107/157 (68.15%), Query Frame = 0
Query:   53 LEKMARQSLLLELTQKQQRTYEAVVDWFLSQMPATYFRQTTEEARLEHLQAITAMIEPRVFEATAAAAAAGRFEATAAGGRTALPPTRDLVLHFEHVTEGRRDVTFIQPG-----TRRRKDGLLALMGSLPPADGTLRQVKVFNSKDGTLAINVFGY 204
            + KMA QSLL ELTQKQQ+TYE+VVDWFL  MPATYFRQT++EARLEHLQAI+AM+EP  F          R +   A     +  TRD+VL  +  +   R+VT IQPG     TR R+  LLA++ SLPPADG L QVKVFNS D TLAINVF Y
Sbjct:    1 MRKMATQSLLHELTQKQQQTYESVVDWFLQNMPATYFRQTSQEARLEHLQAISAMMEPSFFV---------RAKNFKADSDAPVAATRDIVLKLQRASASGREVTVIQPGSAVAGTRERRHNLLAVLESLPPADGKLSQVKVFNSLDRTLAINVFAY 148          
BLAST of mRNA_P-wetherbeei_contig1490.5.1 vs. uniprot
Match: D8LF79_ECTSI (Glutamate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF79_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.300e-31
Identity = 81/177 (45.76%), Postives = 104/177 (58.76%), Query Frame = 0
Query:   46 LPHNSRQLEKMARQSLLLELTQKQQRTYEAVVDWFLSQMPATYFRQTTEEARLEHLQAITAMIEPRVFEATAAAAAAGRFEATAAGGRTALPPTRDLVLHFEHVTEGRRDVTFIQPGTRRRKDGLLALMGSLPPADGTLRQVKVFNSKDGTLAINVFGYTDH----PAAVGAAAAGV 218
            +P N  +LEKMARQSLL EL Q+QQRT+E  VDWFL  MPA+YFRQTTEE+RL+HL AI++M+E             G  +A    G   L PT+D+ LHF+   E  +++TF+Q  T+ R DG+L L+ SLP AD               LA+ +FGY       P A G  AAGV
Sbjct:    1 MPRNELKLEKMARQSLLHELWQEQQRTHEGAVDWFLRNMPASYFRQTTEESRLQHLGAISSMLE------------GGHVDAN---GVERLTPTKDITLHFQRDVENMKEMTFVQ-STKGRSDGILRLLDSLPQADXXXXXXXXXXXXXXNLAVYLFGYMKQEEVPPDAAGGHAAGV 161          
BLAST of mRNA_P-wetherbeei_contig1490.5.1 vs. uniprot
Match: A0A6H5LPU5_9PHAE (Glutamate dehydrogenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPU5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.520e-14
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0
Query:   84 MPATYFRQTTEEARLEHLQAITAMIEPRVFEATAAAAAAGRFEATAAGGRTALPPTRDLVLHFEHVTEGRRDVTFIQPGTRRRKDGLLALMGSLPPADGTLRQVKVFNSKDGTLAINVFGYTDH----PAAVGAAAAGV 218
            MPA+YFRQTTEE+RL+HL AI++M+E             G  +A    G   L PT+D+ LHF+   E  +++TF+Q  T+ R DG+L L+ SLP                  LA+ +FGY       P A G  AAGV
Sbjct:    1 MPASYFRQTTEESRLQHLGAISSMLE------------GGHVDAN---GVERLTPTKDITLHFQRDVENMKEMTFVQ-STKGRSDGILRLLDSLPRXXXXXXXXXXXXXXXXNLAVYLFGYMKQDEAPPDAAGGHAAGV 123          
BLAST of mRNA_P-wetherbeei_contig1490.5.1 vs. uniprot
Match: A0A7S2YL56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YL56_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.250e-9
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 0
Query:   42 ASGWLPHNSRQLEKMARQSLLLELTQKQQRTYEAVVDWFLSQMPATYFRQTTEEARLEHLQAITAMIEPRVFEATAAAAAAGRFEATAAGGRTALPPTRDLVLHFE-HVTEGRRDVTFIQPGTRRRKDGLLALMGSLPPADG 182
            A  W   ++  ++ + +++L+ ELTQ+Q +T EAVV WFL  MP +YF Q  E  R++H++AI ++ +  +                            DL L+ + H+ +GR   TFI+PGT+     LL ++  L   DG
Sbjct:   67 AVSWQAAHNVDIQNVTQKALIYELTQQQTKTIEAVVPWFLENMPESYFLQIPEPFRMDHIKAIASLKDTNM----------------------------DLFLNLKSHMPDGREVFTFIRPGTQ--PGTLLHMLEDLRDNDG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1490.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZIZ6_9STRA2.150e-4157.96Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
D8LF79_ECTSI1.300e-3145.76Glutamate dehydrogenase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPU5_9PHAE3.520e-1438.85Glutamate dehydrogenase n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YL56_9STRA2.250e-930.28Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1490contigP-wetherbeei_contig1490:5578..6828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1490.5.1mRNA_P-wetherbeei_contig1490.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1490 5578..6829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1490.5.1 ID=prot_P-wetherbeei_contig1490.5.1|Name=mRNA_P-wetherbeei_contig1490.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp
FNGLEDAPSPEAMSPGADASAAATSATAAAVAAAAATARASASGWLPHNS
RQLEKMARQSLLLELTQKQQRTYEAVVDWFLSQMPATYFRQTTEEARLEH
LQAITAMIEPRVFEATAAAAAAGRFEATAAGGRTALPPTRDLVLHFEHVT
EGRRDVTFIQPGTRRRKDGLLALMGSLPPADGTLRQVKVFNSKDGTLAIN
VFGYTDHPAAVGAAAAGVP
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