prot_P-wetherbeei_contig14720.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14720.2.1
Unique Nameprot_P-wetherbeei_contig14720.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length89
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig14720.2.1 vs. uniprot
Match: A0A6I2YUF2_9ACTN (Ribosomal RNA small subunit methyltransferase G n=2 Tax=root TaxID=1 RepID=A0A6I2YUF2_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 2.240e-5
Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:    1 SAHVEVIASDVE-LVHRARGRFA-DIATARSFAAAELTARWGSRLLVDGGCLLVSEPPRTDDARWPVD 66
            S HV V+A   E L HR   R A D+  ARSF    +TA  G+  LV+GG L+VSEPP     RWP +
Sbjct:   98 SEHVSVLAGRAEDLGHREDLRGAIDVVVARSFGPPAVTAECGAPFLVEGGALVVSEPPEGRAERWPAE 165
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14720.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6I2YUF2_9ACTN2.240e-547.06Ribosomal RNA small subunit methyltransferase G n=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14720contigP-wetherbeei_contig14720:1419..1685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14720.2.1mRNA_P-wetherbeei_contig14720.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14720 1419..1685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14720.2.1 ID=prot_P-wetherbeei_contig14720.2.1|Name=mRNA_P-wetherbeei_contig14720.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp
SAHVEVIASDVELVHRARGRFADIATARSFAAAELTARWGSRLLVDGGCL
LVSEPPRTDDARWPVDLLERERLVDDGLVDGVRVFRRR*
back to top