prot_P-wetherbeei_contig14707.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14707.1.1
Unique Nameprot_P-wetherbeei_contig14707.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length247
Homology
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI00199EB5AD (Uncharacterized protein n=2 Tax=Dyadobacter endophyticus TaxID=1749036 RepID=UPI00199EB5AD)

HSP 1 Score: 390 bits (1001), Expect = 3.260e-132
Identity = 197/247 (79.76%), Postives = 213/247 (86.23%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 247
            MYNMSDSFWE TYRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKR EKWEEAH Y  + +++QEENP +D RGFSEAELLE IG LPEHHRLVFNLYVVDNFTHAQIA RLGISEGTSKSHLARARKKIRELL DKL+ +KE KRAF WL+  YP  H++ LV+GKL NLAIRPQR+ S  I+     +P FKP+GISY  YMKTG+MTIATA
Sbjct:    1 MYNMSDSFWETTYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRQEKWEEAHAYHTIANELQEENPANDQRGFSEAELLEVIGQLPEHHRLVFNLYVVDNFTHAQIATRLGISEGTSKSHLARARKKIRELLKDKLRKDKERKRAFAWLMFSYPFRHVDHLVAGKLRNLAIRPQRRLS--IANTNSGVPGFKPSGISYGAYMKTGLMTIATA 245          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1H6RIS8_9BACT (RNA polymerase sigma factor, sigma-70 family n=2 Tax=Dyadobacter sp. SG02 TaxID=1855291 RepID=A0A1H6RIS8_9BACT)

HSP 1 Score: 368 bits (944), Expect = 1.170e-123
Identity = 189/244 (77.46%), Postives = 208/244 (85.25%), Query Frame = 0
Query:    4 MSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 247
            MSDSFWEA YRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQ+LREQKR EKWE AH Y  +  ++Q+ENP  DDR FSEAELLE I  LP+HHRLVFNLYVVDNFTHAQIA+ L ISEGTSKSHL+RARK++RELLHDKL+N KE KRAF WLLLPYP G I+RLV+GKL+NLAI PQR  +  +   E   P FKP GISYATY+KTG++TIATA
Sbjct:    3 MSDSFWEAAYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQHLREQKRQEKWEAAHAYQTIIHEIQDENPFHDDRVFSEAELLEVINSLPDHHRLVFNLYVVDNFTHAQIASLLHISEGTSKSHLSRARKRVRELLHDKLRNGKERKRAFFWLLLPYPFGGIDRLVAGKLSNLAILPQRNTAFHMLH-EAHAPVFKPAGISYATYVKTGVLTIATA 245          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1G7PYY4_9BACT (RNA polymerase sigma factor, sigma-70 family n=2 Tax=Dyadobacter soli TaxID=659014 RepID=A0A1G7PYY4_9BACT)

HSP 1 Score: 358 bits (919), Expect = 9.760e-120
Identity = 181/247 (73.28%), Postives = 203/247 (82.19%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 247
            MY+MSDSFWEATYRQNIAKMIGVCWRYT +RQ AEDLAHDAFL+AIDKVSSFEN GPFEAWLRRIVVNVALQ+LREQKR EKWE  H Y A G   Q+E+P  + R FSE+ELLE IGYLP+HHR+VFNLYV+DNFTHAQIAA LGISEGTSKSHLARARKKIR LL  +    K+ KRAF WLL  +PI  I+ LV+GKL NLAI PQ + SLD++  E P+P FKP+GISY TY KTG+M I TA
Sbjct:    1 MYHMSDSFWEATYRQNIAKMIGVCWRYTHDRQTAEDLAHDAFLLAIDKVSSFENNGPFEAWLRRIVVNVALQHLREQKRQEKWEADHAYGAPGYISQDESPADNGRSFSESELLETIGYLPDHHRIVFNLYVIDNFTHAQIAALLGISEGTSKSHLARARKKIRALLDKQAGQAKKRKRAFFWLLFSHPIHPIDHLVAGKLKNLAIEPQTRLSLDVTNAEAPVPAFKPSGISYTTYWKTGVMGITTA 247          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001FD55611 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. U1 TaxID=2910158 RepID=UPI001FD55611)

HSP 1 Score: 313 bits (801), Expect = 8.960e-102
Identity = 164/246 (66.67%), Postives = 196/246 (79.67%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSL-DISAPEPPIPPFKPTGISYATYMKTGIMTIA 245
            M   SD+FWEATYRQNIAKMIGVC RYTQNRQ AEDLAHDAFLVAIDKVSSFENKGPFEAWLRRI VNVALQ+LR QKR +++ +   Y    DD+ + N  +++  FSE ELLE I YLPEHHRLVFNLYVVDNFTHAQIAA+LGIS+GTSKSHLARARKKIRELL D+L+ +KE KR FV+LL PY +  I+ L +  L +L ++P R FS+ +I+  + PIP ++PTGIS + Y+KTG+  IA
Sbjct:    1 MDKRSDNFWEATYRQNIAKMIGVCCRYTQNRQTAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIAVNVALQHLRVQKREQRFVQIAAYATPYDDIPDGNAGNENLTFSETELLEVISYLPEHHRLVFNLYVVDNFTHAQIAAQLGISQGTSKSHLARARKKIRELLSDRLRKDKERKRGFVFLLFPYKLWSIDNLFAATLRDLLMQPTRDFSISNINLNQQPIPKYRPTGISNSIYLKTGVWGIA 246          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A5B0FU88_9BACT (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. UC 10 TaxID=2605428 RepID=A0A5B0FU88_9BACT)

HSP 1 Score: 293 bits (751), Expect = 2.660e-94
Identity = 158/247 (63.97%), Postives = 192/247 (77.73%), Query Frame = 0
Query:    4 MSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKF---SLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA 247
            MSDSFWEATYR+NI KMIG+C RYTQ+RQ AEDLAHDAF++AIDKVSSFEN+GPFEAWLR+IVVNVALQYLR QK+ EK  + + Y A+ D   EE+P +D   FSE ELL  IG LPEHHRLVFNLYV+DNFTHAQIAA+LGISEGTSKSHLARARKKIR LLH  L NNKE KRAF++++ P+ I HI++L +  L   +I P+ +     +D++     IP ++P  I  +TY+KTG + IATA
Sbjct:    1 MSDSFWEATYRRNIGKMIGICCRYTQDRQTAEDLAHDAFVIAIDKVSSFENRGPFEAWLRQIVVNVALQYLRAQKQQEKLGQ-NAYPAIYDHHHEESPDNDLNAFSEQELLSVIGQLPEHHRLVFNLYVIDNFTHAQIAAQLGISEGTSKSHLARARKKIRVLLHLLLTNNKERKRAFLFIIFPHRIWHIDQLFTDILGQFSIPPRAEHLFHQVDLNGAA--IPKYQPLFIQKSTYLKTGALGIATA 244          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A1T5EUF8_9BACT (RNA polymerase sigma factor, sigma-70 family n=1 Tax=Dyadobacter psychrophilus TaxID=651661 RepID=A0A1T5EUF8_9BACT)

HSP 1 Score: 286 bits (733), Expect = 1.250e-91
Identity = 151/245 (61.63%), Postives = 186/245 (75.92%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIA 245
            M N S++FWE+ YRQNIAKMIGVCWRYTQ+RQ AEDLAHDAF+VAI+K SSFENKGPFEAWLRRIVVNVALQYLRE+K+ +  +       +  D+++EN  +D   FSEAELLE IGYLPEHHRLVFNLYV+DNF+HAQIAARL ISEGTSKSHLARARKKIR+LL  KL+ +K+ +R F+ LL P    HI+ L++  LN   I P +    +I+   PP+   +P  +S  TY+K GI ++A
Sbjct:    1 MDNRSNNFWESIYRQNIAKMIGVCWRYTQDRQTAEDLAHDAFVVAINKASSFENKGPFEAWLRRIVVNVALQYLRERKKSDNLDRPAATTFIYSDVEDENSHNDLHTFSEAELLEVIGYLPEHHRLVFNLYVIDNFSHAQIAARLSISEGTSKSHLARARKKIRQLLQAKLQEDKKRRRTFLLLLFPSRFWHIDSLITKGLNGFEIEPLKNRPENIALDLPPVSNSRPF-MSNKTYLKYGISSVA 244          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A7K1SPK6_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Spirosoma arboris TaxID=2682092 RepID=A0A7K1SPK6_9BACT)

HSP 1 Score: 275 bits (702), Expect = 8.260e-87
Identity = 148/248 (59.68%), Postives = 184/248 (74.19%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKF---SLDISAPEPPIPPFKPTGISYATYMKTGIMTIA 245
            M  ++ SFWEATY+QNIAK+IGVC+RYT NRQ+AEDLAHDAFLVAIDK SSFENKG F+AWLRRIV+NVALQYLREQK+ +  E+   YD    D Q+EN ++++  FS+AELLEAI  LPEHH+LVFNLYV DNFTHAQI A LGISEGTSKSHLARARKKIR++L++K+  NK+  R F+  LLP  +  I+ L + +LN   I+PQ+ F   ++D S  E      KP+ I    Y+K  I  +A
Sbjct:    1 MNGVTKSFWEATYKQNIAKLIGVCYRYTYNRQIAEDLAHDAFLVAIDKSSSFENKGSFDAWLRRIVINVALQYLREQKKQKHQEDRIAYDTTSIDYQDENQVNEENTFSKAELLEAIERLPEHHKLVFNLYVFDNFTHAQIGAELGISEGTSKSHLARARKKIRQILNEKVNENKKRTRLFLLFLLPDKLYKIDHLFARQLNYFEIQPQKLFPFHTIDFS--EISTLKSKPSAIFSEAYLKIDIAAVA 246          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001F2C0AA9 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. LJ419 TaxID=2906456 RepID=UPI001F2C0AA9)

HSP 1 Score: 273 bits (699), Expect = 1.870e-86
Identity = 146/242 (60.33%), Postives = 179/242 (73.97%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDISAPE-PPIPPFKPTGISYATYMKTGI 241
            M N+S  FWE  YRQNI KMI VCWRYT +RQ AEDLAHDAF+VAI KV+SF+N+GPFEAWLRRIVVNVALQYLR+QK  EK      Y    D  Q+ENP      FSE ELLE I  LPEHH+LVFNLYV+DNFTHAQIAA+LGISEGTSKSHLARARKKIRELL++++++NK  K++F   +LPY    I+  + G+L +L ++P+R  SL+IS  E   IP +  TG++   + K G+
Sbjct:    1 MDNISKHFWEDAYRQNIGKMIAVCWRYTHDRQTAEDLAHDAFVVAIGKVTSFKNRGPFEAWLRRIVVNVALQYLRQQKEREKIRIGTEYPCELDANQDENPGR--FSFSEIELLEVISNLPEHHKLVFNLYVIDNFTHAQIAAQLGISEGTSKSHLARARKKIRELLNERIRDNKRGKKSFPLFILPYQSWGIDGFIFGRLKDLQVQPKRLLSLNISKTECMTIPKYVSTGLTSRFFFKAGL 240          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: UPI001F20BD51 (RNA polymerase sigma factor n=1 Tax=Dyadobacter sp. CY323 TaxID=2907302 RepID=UPI001F20BD51)

HSP 1 Score: 273 bits (698), Expect = 2.570e-86
Identity = 147/242 (60.74%), Postives = 176/242 (72.73%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLDIS-APEPPIPPFKPTGISYATYMKTGI 241
            M N++++FWE TYRQNI+KMIGVCWRYTQ+RQ AEDLAHDAF+VAI KVSSFENKGPFEAWLRRIVVNVALQ+LR+QK  EK  +   Y A  + +QEENP  D   FSE ELLE I  LPEHHRLVFNLYV+DN TH +IAA+LGISEGTSKSHLARARKK+RELL  +++  K  ++ F  L LP+   +I+  VS +L  L I+P +  S   + A    IP +KP G       KT I
Sbjct:    1 MDNLTNNFWENTYRQNISKMIGVCWRYTQDRQTAEDLAHDAFVVAIGKVSSFENKGPFEAWLRRIVVNVALQHLRQQKIREKLAQGAAYPAAYEVIQEENPDCDHFSFSETELLEVIANLPEHHRLVFNLYVIDNLTHGEIAAQLGISEGTSKSHLARARKKVRELLSAQIREKKGHRKWFPLLFLPFQFRNIDEFVSRELGGLQIQPLKGASFQTARAQHALIPKWKPAGSGSTFLSKTAI 242          
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Match: A0A6P1VWY0_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Spirosoma endbachense TaxID=2666025 RepID=A0A6P1VWY0_9BACT)

HSP 1 Score: 265 bits (677), Expect = 4.550e-83
Identity = 147/246 (59.76%), Postives = 173/246 (70.33%), Query Frame = 0
Query:    1 MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVSSFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEENPMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEGTSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGKLNNLAIRPQRKFSLD-ISAPEPPIPPFKPTGISYATYMKTGIMTIA 245
            M ++  SFWE  Y+ NIAKMIGVC+RYT NRQ+AEDLAHDAFLVAIDK SSFENKG FEAWLRRIVVN ALQYLREQK+ +       Y     + Q EN ++++  FSEAELLEAI  LPEHH+LVFNLYV DNFTHAQI   LGISEGTSKSHLARARK IR +L  K K NK+ K+  V +LLP  + HI+ L + KLN   I+PQ+   +D I      IP FK   I    Y+KT + T+A
Sbjct:    1 MNDVPKSFWETIYKHNIAKMIGVCYRYTYNRQIAEDLAHDAFLVAIDKSSSFENKGSFEAWLRRIVVNTALQYLREQKKKKCHLGRIAYVMASTEPQNENQLNEETNFSEAELLEAIECLPEHHKLVFNLYVFDNFTHAQIGVELGISEGTSKSHLARARKSIRGILTKKAKGNKKRKKLAVLILLPDRLWHIDDLFTRKLNYFEIQPQKSAPIDTIDFSGISIPKFKSPTIFSENYLKTDVSTLA 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14707.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00199EB5AD3.260e-13279.76Uncharacterized protein n=2 Tax=Dyadobacter endoph... [more]
A0A1H6RIS8_9BACT1.170e-12377.46RNA polymerase sigma factor, sigma-70 family n=2 T... [more]
A0A1G7PYY4_9BACT9.760e-12073.28RNA polymerase sigma factor, sigma-70 family n=2 T... [more]
UPI001FD556118.960e-10266.67RNA polymerase sigma factor n=1 Tax=Dyadobacter sp... [more]
A0A5B0FU88_9BACT2.660e-9463.97RNA polymerase sigma factor n=1 Tax=Dyadobacter sp... [more]
A0A1T5EUF8_9BACT1.250e-9161.63RNA polymerase sigma factor, sigma-70 family n=1 T... [more]
A0A7K1SPK6_9BACT8.260e-8759.68Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
UPI001F2C0AA91.870e-8660.33RNA polymerase sigma factor n=1 Tax=Dyadobacter sp... [more]
UPI001F20BD512.570e-8660.74RNA polymerase sigma factor n=1 Tax=Dyadobacter sp... [more]
A0A6P1VWY0_9BACT4.550e-8359.76Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 13..79
e-value: 5.5E-14
score: 51.7
NoneNo IPR availableGENE3D1.10.1740.10coord: 4..77
e-value: 3.4E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR43133:SF8ECF RNA POLYMERASE SIGMA-E FACTOR-RELATEDcoord: 6..171
NoneNo IPR availableCDDcd06171Sigma70_r4coord: 111..164
e-value: 1.65222E-11
score: 55.9586
IPR013249RNA polymerase sigma factor 70, region 4 type 2PFAMPF08281Sigma70_r4_2coord: 112..163
e-value: 9.0E-16
score: 57.3
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 11..167
e-value: 1.2E-26
score: 91.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 78..168
e-value: 1.2E-18
score: 68.7
IPR039425RNA polymerase sigma-70 likePANTHERPTHR43133RNA POLYMERASE ECF-TYPE SIGMA FACTOcoord: 6..171
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 111..168
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 8..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14707contigP-wetherbeei_contig14707:1..741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14707.1.1mRNA_P-wetherbeei_contig14707.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14707 1..741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14707.1.1 ID=prot_P-wetherbeei_contig14707.1.1|Name=mRNA_P-wetherbeei_contig14707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MYNMSDSFWEATYRQNIAKMIGVCWRYTQNRQVAEDLAHDAFLVAIDKVS
SFENKGPFEAWLRRIVVNVALQYLREQKRLEKWEEAHTYDAVGDDMQEEN
PMSDDRGFSEAELLEAIGYLPEHHRLVFNLYVVDNFTHAQIAARLGISEG
TSKSHLARARKKIRELLHDKLKNNKEWKRAFVWLLLPYPIGHIERLVSGK
LNNLAIRPQRKFSLDISAPEPPIPPFKPTGISYATYMKTGIMTIATA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007627RNA_pol_sigma70_r2
IPR013249RNA_pol_sigma70_r4_t2
IPR014284RNA_pol_sigma-70_dom
IPR036388WH-like_DNA-bd_sf
IPR039425RNA_pol_sigma-70-like
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2