prot_P-wetherbeei_contig14659.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14659.1.1
Unique Nameprot_P-wetherbeei_contig14659.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length80
Homology
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BLAST of mRNA_P-wetherbeei_contig14659.1.1 vs. uniprot
Match: A0A835YN48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN48_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.290e-7
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:   42 PAVGDALVSFNGVSVSGRSYAEVATALRAAGRPLLLRFR 80
            P +GDAL+S+NGVSV+G ++A+VA ALR AGRPL LRFR
Sbjct:  902 PRIGDALLSYNGVSVAGMAFADVAAALRQAGRPLRLRFR 940
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14659.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YN48_9STRA3.290e-769.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 20..80
e-value: 6.5E-6
score: 28.0
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 6..79
IPR001478PDZ domainPROSITEPS50106PDZcoord: 44..80
score: 8.6268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14659contigP-wetherbeei_contig14659:629..868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14659.1.1mRNA_P-wetherbeei_contig14659.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14659 629..868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14659.1.1 ID=prot_P-wetherbeei_contig14659.1.1|Name=mRNA_P-wetherbeei_contig14659.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
STVEYELIFHEPRIGLHFQMTGAGRLVVKGRQGLADPIATLPAVGDALVS
FNGVSVSGRSYAEVATALRAAGRPLLLRFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ