prot_P-wetherbeei_contig14646.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14646.1.1
Unique Nameprot_P-wetherbeei_contig14646.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length155
Homology
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BLAST of mRNA_P-wetherbeei_contig14646.1.1 vs. uniprot
Match: D8LDG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG0_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 7.950e-17
Identity = 53/176 (30.11%), Postives = 68/176 (38.64%), Query Frame = 0 
Query:    4 GSVKVYLCPSPSKTAAXXXXXXXXXXXXXG------GGFAP-------------------VLDLAPLVVLALAGPSLTCISWHPTDPTQLLCGATDGSVCLWRLPTYGGNGCGGEEPAPLTTPARRYVDMTRDASSAGDCVLRAVEWCPFEPRLFAAAGQQTAAVVWHVDDQFRPI 154
            GS+ VY+CP P    A             G      G FAP                   VL   P++   L    L C+ W P +P  LL GA+DG+VC+W++   GG   GGE       P R++             V+  V WCP  P LFA  G      VW   D F P+
Sbjct: 1140 GSLPVYVCPDPDGVTAEAASSLSNTAPGSGASGGTAGAFAPPGSTPAAXXXXXXXXHGAVVLKTKPILQARLKHAELMCLDWSPQEPDLLLAGASDGTVCIWKVSALGGEH-GGEGTTGNHPPFRQFSCSAIGMCDVVQAVVNDVAWCPTSPNLFATTGAGHILTVWDTSDVFEPL 1314
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BLAST of mRNA_P-wetherbeei_contig14646.1.1 vs. uniprot
Match: W7TZJ1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZJ1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.220e-9
Identity = 57/159 (35.85%), Postives = 73/159 (45.91%), Query Frame = 0 
Query:    3 DGSVKVYLCPSPSKTAAXXXXXXXXXXXXXGGGFAPVLDLAPLVVLALAGPSLTCISWHPTDPTQLLCGATDGSVCLWRLPT------YGGNGCGGEEPAPLTTPARRYVDMTRDASSAGDCVLRAVEWCPFEPRLFAAAGQQTAAVVWHVDDQFRPIV 155
            DGS +VY+ P P +   XXXXXXXX          PV +L P       G  LT +   P DP+QLLCGAT+G   L+RL        +         P     PARR+ D  R+A       + AV W P  P LF   G   +  +W +   FRP+V
Sbjct:  168 DGSARVYVLPLPPRLXXXXXXXXXXIP------LQPVQELLPP-----RGTCLTTVRPSPHDPSQLLCGATNGMALLYRLELPLLSCPFPSLPALSPPPPRRLFPARRFYDA-REAPLPSLSAVDAVAWHPTLPDLFVTGGHDCSLRLWDLRKPFRPVV 314
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14646.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDG0_ECTSI7.950e-1730.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TZJ1_9STRA2.220e-935.85Uncharacterized protein (Fragment) n=2 Tax=Monodop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 43..81
e-value: 0.0068
score: 25.6
coord: 103..146
e-value: 270.0
score: 1.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..152
e-value: 5.4E-12
score: 47.2
NoneNo IPR availablePANTHERPTHR15052RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNITcoord: 3..154
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 54..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14646contigP-wetherbeei_contig14646:210..779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14646.1.1mRNA_P-wetherbeei_contig14646.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14646 210..809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14646.1.1 ID=prot_P-wetherbeei_contig14646.1.1|Name=mRNA_P-wetherbeei_contig14646.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MLDGSVKVYLCPSPSKTAAASSAAAAGAAAVSGGGFAPVLDLAPLVVLAL
AGPSLTCISWHPTDPTQLLCGATDGSVCLWRLPTYGGNGCGGEEPAPLTT
PARRYVDMTRDASSAGDCVLRAVEWCPFEPRLFAAAGQQTAAVVWHVDDQ
FRPIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf