prot_P-wetherbeei_contig14585.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14585.1.1
Unique Nameprot_P-wetherbeei_contig14585.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length74
Homology
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: D8LH21_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH21_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.410e-31
Identity = 59/71 (83.10%), Postives = 67/71 (94.37%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GL+LVFTETKRNAD+LEYQL+  G+PASSIHGDK+QRERE+AL+ FK+G TPILVATDVAARGLDINNVTQ
Sbjct:  464 GLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQ 534          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A6H5JCH1_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH1_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.500e-31
Identity = 59/71 (83.10%), Postives = 67/71 (94.37%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GL+LVFTETKRNAD+LEYQL+  G+PASSIHGDK+QRERE+AL+ FK+G TPILVATDVAARGLDINNVTQ
Sbjct:  547 GLVLVFTETKRNADYLEYQLSDQGYPASSIHGDKTQREREDALRLFKTGTTPILVATDVAARGLDINNVTQ 617          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A836CEH0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.750e-29
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLIL+FTETKR  D+LE+QL   G PA+SIHGDK+QREREEALK FK+G+TPILVATDVAARGLDI+NVTQ
Sbjct:  370 GLILIFTETKRGCDYLEHQLRMQGLPAASIHGDKTQREREEALKYFKNGQTPILVATDVAARGLDISNVTQ 440          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A835ZB12_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB12_9STRA)

HSP 1 Score: 116 bits (291), Expect = 8.950e-29
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GL+LVFTETKR AD+LE+QL     PA+SIHGDKSQREREEALK FKSG++PILVATDVAARGLDI+NVTQ
Sbjct:  387 GLVLVFTETKRGADYLEHQLRMRSLPAASIHGDKSQREREEALKHFKSGKSPILVATDVAARGLDISNVTQ 457          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A7S2SLW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLW3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 9.280e-29
Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLILVF ETKRN D++E  L + GFPA SIHGDKSQREREEAL+ FK+G+ P+LVATDVAARGLDI NVTQ
Sbjct:  127 GLILVFVETKRNCDFVEDILCQRGFPACSIHGDKSQREREEALRAFKTGKCPVLVATDVAARGLDIPNVTQ 197          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A5D6XZC5_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZC5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.350e-29
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLILVF ETKRNAD+LE  L R GFPA+SIHGD++QRERE+AL  F+SGRTP+LVATDVAARGLDIN VTQ
Sbjct:  322 GLILVFVETKRNADFLEDMLCREGFPATSIHGDRTQREREQALASFRSGRTPVLVATDVAARGLDINGVTQ 392          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A7S1TZT5_9STRA (RNA helicase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZT5_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.800e-28
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLILVF ETKR+AD +E+ L +SGFPA+SIHGD+SQRERE ALK FKSG TPILVATDVAARGLDIN VTQ
Sbjct:  334 GLILVFVETKRSADEIEHYLCQSGFPATSIHGDRSQREREYALKTFKSGETPILVATDVAARGLDINGVTQ 404          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: K3WTV7_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTV7_GLOUD)

HSP 1 Score: 115 bits (288), Expect = 2.430e-28
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLILVF ETKRNAD+LE  L R GFPA+SIHGD++QRERE+AL  F+SGRTP+LVATDVAARGLDIN VTQ
Sbjct:  427 GLILVFVETKRNADFLEDLLCREGFPATSIHGDRTQREREQALASFRSGRTPVLVATDVAARGLDINGVTQ 497          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: A0A7S3HCK6_9STRA (RNA helicase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCK6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.480e-28
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GL+LVF ETKR AD LE  L R+ FPASSIHGDKSQRERE+ALK FK+GRTPILVATDVAARGLDI NVTQ
Sbjct:  453 GLVLVFVETKRGADHLEEVLMRNNFPASSIHGDKSQREREDALKWFKTGRTPILVATDVAARGLDIPNVTQ 523          
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Match: D0MXE0_PHYIT (RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0MXE0_PHYIT)

HSP 1 Score: 114 bits (285), Expect = 6.200e-28
Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGRTPILVATDVAARGLDINNVTQ 71
            GLILVF ETKR AD+LE  L R GFPA+SIHGD+SQRERE+AL  FKSGRTP+LVATDVAARGLDI+ VTQ
Sbjct:  419 GLILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQ 489          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14585.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH21_ECTSI1.410e-3183.10RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCH1_9PHAE1.500e-3183.10RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A836CEH0_9STRA7.750e-2978.87P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZB12_9STRA8.950e-2980.28RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2SLW3_9STRA9.280e-2976.06Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6XZC5_9STRA9.350e-2978.87RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A7S1TZT5_9STRA1.800e-2880.28RNA helicase (Fragment) n=1 Tax=Phaeomonas parva T... [more]
K3WTV7_GLOUD2.430e-2878.87RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A7S3HCK6_9STRA3.480e-2881.69RNA helicase n=1 Tax=Spumella elongata TaxID=89044... [more]
D0MXE0_PHYIT6.200e-2878.87RNA helicase n=20 Tax=Peronosporaceae TaxID=4777 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 14..73
e-value: 3.0E-5
score: 33.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 2..70
e-value: 1.3E-16
score: 60.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..73
score: 12.839289
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..71
e-value: 1.9E-25
score: 91.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..70
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 3..70
NoneNo IPR availablePANTHERPTHR47958:SF53DEAD-BOX ATP-DEPENDENT RNA HELICASE 37coord: 3..70
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 1..70
e-value: 3.2787E-34
score: 111.06

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14585contigP-wetherbeei_contig14585:1044..1265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14585.1.1mRNA_P-wetherbeei_contig14585.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14585 523..1265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14585.1.1 ID=prot_P-wetherbeei_contig14585.1.1|Name=mRNA_P-wetherbeei_contig14585.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp
GLILVFTETKRNADWLEYQLTRSGFPASSIHGDKSQREREEALKCFKSGR
TPILVATDVAARGLDINNVTQAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase