prot_P-wetherbeei_contig14576.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14576.1.1
Unique Nameprot_P-wetherbeei_contig14576.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length122
Homology
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A523P3K6_9PROT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P3K6_9PROT)

HSP 1 Score: 150 bits (380), Expect = 9.090e-41
Identity = 77/122 (63.11%), Postives = 99/122 (81.15%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDR-AIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 121
            SRDY+++V+++      T+CLEGTLFDERHPRLVRVN+Y +E+ LEGQ+L TRHAD+PGVIGA+GE+LGRAGINI+RMQVGVA      AIAV+G+S  L++  ++ LA I A+DKVLQV F
Sbjct:  407 SRDYLAVVQVSGVTAMGTLCLEGTLFDERHPRLVRVNNYIIESELEGQILMTRHADRPGVIGAIGELLGRAGINITRMQVGVASDDKTSAIAVVGISNELSEATMESLAEIDAIDKVLQVKF 528          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A1Z8VA24_9PROT (ACT domain-containing protein (Fragment) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1Z8VA24_9PROT)

HSP 1 Score: 129 bits (323), Expect = 1.880e-35
Identity = 64/119 (53.78%), Postives = 90/119 (75.63%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 119
            S +Y+S++RITA     T+ LEGT+FD R  RLVRV+DY++E+ LEG++L T+HAD+PGVIG +G  LG  G+NISRMQVGV+ GS  AIA+L VS  L +  ++ ++ I AV+KV+Q+
Sbjct:   59 STEYISVLRITATGPDQTVYLEGTIFDGRRARLVRVSDYDIESPLEGRLLITKHADEPGVIGMIGATLGEKGVNISRMQVGVSGGSQMAIAILAVSDELEKATMEGISRIPAVEKVMQI 177          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A3D5DFA7_9GAMM (D-3-phosphoglycerate dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFA7_9GAMM)

HSP 1 Score: 135 bits (339), Expect = 4.880e-35
Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVA-KGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 121
            SRDY++++R++      T+ LEGTLFDERHPRLVRVNDY +E+ L G+++ TRH D+PGVIGA+G +LGR GINIS MQVG+A  GS  AIAV  VS  L+   L +L++I A+DK LQ+ F
Sbjct:  375 SRDYLTMLRVSGVTAAGTLVLEGTLFDERHPRLVRVNDYIIESELTGRIVMTRHDDRPGVIGAIGALLGREGINISSMQVGIAGDGSSEAIAVFRVSSELSIGTLQELSSIDAIDKALQIEF 496          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A1G0G3V3_9GAMM (D-3-phosphoglycerate dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G3V3_9GAMM)

HSP 1 Score: 130 bits (328), Expect = 2.510e-33
Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 0
Query:    4 YVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 119
            Y+S++ I A+ G  TI + GTLFD+RHPRLV +N Y +E  L+G +L T HADKPGV+GA+G +LG+A INIS MQVG+A  SD AIAVLG+S+ L   ++  + AI A+ KVLQV
Sbjct:  410 YLSMLSIKARQGAETITVAGTLFDDRHPRLVGINHYPLEAPLDGNLLLTHHADKPGVVGAIGNVLGQADINISHMQVGIASDSDEAIAVLGISRLLDDSSMAAIRAIPAIHKVLQV 525          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A6L8EJF1_9GAMM (ACT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJF1_9GAMM)

HSP 1 Score: 120 bits (302), Expect = 6.510e-33
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    3 DYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 121
            DY S V ++  NG+    + GTLF  R+PRL+ +NDYE+E  LEG +L TRH D+PGVI A+  +L    INISRMQ+G+  GSD+AIAV+GVS  L  + +D+L+ I A++KV+QV  
Sbjct:   10 DYHSAVSLSVHNGERETRVVGTLFHRRYPRLISINDYEIEAVLEGNLLVTRHNDQPGVIAAISNLLADERINISRMQLGIVSGSDKAIAVIGVSTPLNDELMDKLSQIEAINKVMQVSL 128          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: X0YBF9_9ZZZZ (ACT domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0YBF9_9ZZZZ)

HSP 1 Score: 123 bits (308), Expect = 7.470e-33
Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 119
            + DYVSL+ +  K  + +  + GTL  ERHPRLVR++DY VE   EG ++FTRH D+PGV+G+LG IL R  INISRMQVGVA+G   AIA++GVS  ++  AL+++ AI  V + +Q+
Sbjct:   87 AHDYVSLIELRGKAAQSSTSVAGTLLGERHPRLVRIDDYHVEAVPEGCLIFTRHEDRPGVVGSLGSILSRENINISRMQVGVAEGRPEAIALIGVSAPISPSALEEVQAIPGVRQAIQI 205          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A661C3V8_9GAMM (D-3-phosphoglycerate dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661C3V8_9GAMM)

HSP 1 Score: 129 bits (323), Expect = 1.270e-32
Identity = 61/121 (50.41%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 121
            + DY+S+V + AK     I + GTL ++++ RL+++NDY++E  L G +L TRH+D+PGV+GALG +LG  GINIS MQVGV  G D AIA++G+SQ L++ AL ++A I A+DKV+QV  
Sbjct:  406 THDYISMVSVKAKFDNEEIIVSGTLLNDKYARLIQINDYQIEAPLSGNLLITRHSDQPGVVGALGVLLGEEGINISNMQVGVKDGLDEAIAIIGISQLLSETALGKVADIPAIDKVIQVSL 526          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A6I0E7F2_HYPSQ (D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0E7F2_HYPSQ)

HSP 1 Score: 126 bits (317), Expect = 9.300e-32
Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 119
            +RDYVSLV + AK G+ +  + GTL  E HPRLV ++DY VE   EG ++FTRH D+PGV+GALG ILGR  INISRMQVGVA+G   AIA++GVS  L   AL+++ AI A+ + +Q+
Sbjct:  410 ARDYVSLVELRAKTGEASTSVAGTLLGESHPRLVCIDDYHVEAVPEGCLIFTRHDDRPGVVGALGGILGRENINISRMQVGVAEGRPEAIALVGVSAPLPPKALEEVRAIPAIRQAVQI 528          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A3C0BRI6_9HYPH (D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C0BRI6_9HYPH)

HSP 1 Score: 126 bits (316), Expect = 1.300e-31
Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 119
            + DY+SLV + AK  +    + GTL  +RHPRLVR++DY VE   EG ++FTRH D+PGV+GALG ILGR  INISRMQVG+A+G   AIA++GVS  L+  AL+++ AI A+ + +Q+
Sbjct:  410 AHDYLSLVELRAKTAETLTSVAGTLLGDRHPRLVRIDDYHVEAVPEGYLIFTRHDDQPGVVGALGSILGRENINISRMQVGIAEGRAEAIALIGVSAPLSPKALEEVQAIPAIRQAVQI 528          
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A522VIM2_9GAMM (D-3-phosphoglycerate dehydrogenase n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A522VIM2_9GAMM)

HSP 1 Score: 125 bits (315), Expect = 1.750e-31
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 0
Query:    1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 121
            S +Y+SL+ +TA +    + L GTLFDER PRLVR+N+YE+E  LEG +L  RH D+PGV+GALG ILGRAGINISRMQ+G   G+DRA+A+L +S+ L+ D + ++  I A+ K  Q+  
Sbjct:  408 SPNYLSLIGLTAWSDSEQVSLAGTLFDERLPRLVRINNYEIEAMLEGHILLFRHYDRPGVVGALGSILGRAGINISRMQLGDEPGTDRAVALLQLSRPLSADVMAEIEQIDAITKAGQISL 528          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523P3K6_9PROT9.090e-4163.11D-3-phosphoglycerate dehydrogenase n=1 Tax=Proteob... [more]
A0A1Z8VA24_9PROT1.880e-3553.78ACT domain-containing protein (Fragment) n=2 Tax=P... [more]
A0A3D5DFA7_9GAMM4.880e-3557.38D-3-phosphoglycerate dehydrogenase (Fragment) n=1 ... [more]
A0A1G0G3V3_9GAMM2.510e-3356.03D-3-phosphoglycerate dehydrogenase n=1 Tax=Gammapr... [more]
A0A6L8EJF1_9GAMM6.510e-3350.42ACT domain-containing protein n=1 Tax=Gammaproteob... [more]
X0YBF9_9ZZZZ7.470e-3351.26ACT domain-containing protein (Fragment) n=1 Tax=m... [more]
A0A661C3V8_9GAMM1.270e-3250.41D-3-phosphoglycerate dehydrogenase n=2 Tax=Gammapr... [more]
A0A6I0E7F2_HYPSQ9.300e-3255.46D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomi... [more]
A0A3C0BRI6_9HYPH1.300e-3152.94D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomi... [more]
A0A522VIM2_9GAMM1.750e-3152.89D-3-phosphoglycerate dehydrogenase n=1 Tax=Methylo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002912ACT domainPFAMPF01842ACTcoord: 49..111
e-value: 2.3E-9
score: 36.8
IPR002912ACT domainPROSITEPS51671ACTcoord: 49..121
score: 11.426594
IPR029009Allosteric substrate binding domain superfamilyGENE3D3.30.1330.90coord: 1..47
e-value: 3.1E-7
score: 32.3
IPR029009Allosteric substrate binding domain superfamilySUPERFAMILY143548Serine metabolism enzymes domaincoord: 2..42
NoneNo IPR availableGENE3D3.30.70.260coord: 48..121
e-value: 8.2E-21
score: 75.8
NoneNo IPR availablePANTHERPTHR42938:SF22D-3-PHOSPHOGLYCERATE DEHYDROGENASE 2, CHLOROPLASTICcoord: 16..114
NoneNo IPR availablePANTHERPTHR42938FORMATE DEHYDROGENASE 1coord: 16..114
NoneNo IPR availableCDDcd04902ACT_3PGDH-xctcoord: 49..116
e-value: 3.92502E-22
score: 80.9769
IPR045865ACT-like domainSUPERFAMILY55021ACT-likecoord: 38..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14576contigP-wetherbeei_contig14576:1..366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14576.1.1mRNA_P-wetherbeei_contig14576.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14576 1..366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14576.1.1 ID=prot_P-wetherbeei_contig14576.1.1|Name=mRNA_P-wetherbeei_contig14576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQML
FTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALA
QDALDQLAAIAAVDKVLQVGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
IPR029009ASB_dom_sf
IPR045865ACT-like_dom_sf