prot_P-wetherbeei_contig1453.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1453.1.1
Unique Name	prot_P-wetherbeei_contig1453.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	616

Homology

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: UPI0003F0A194 (RING finger protein 157-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0A194)

HSP 1 Score: 68.2 bits (165), Expect = 1.140e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            D+ +ECV+C+C+ R+ LI+PCRHL +CSGCAD L      CP CR P+  +++
Sbjct:  204 DNGSECVICMCDLRDTLILPCRHLCLCSGCADSLRYQSSCCPICRAPFRALLQ 256

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: B7PGD7_IXOSC (RING-type E3 ubiquitin transferase n=2 Tax=Ixodes TaxID=6944 RepID=B7PGD7_IXOSC)

HSP 1 Score: 65.5 bits (158), Expect = 9.510e-8
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS  ECV+C+CE R+ LI+PCRHL +CS CAD L      CP CR P+  +++
Sbjct:  256 DSGAECVICMCESRDTLILPCRHLCLCSCCADSLRYQANNCPICRAPFRALLQ 308

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: UPI000771D37C (E3 ubiquitin ligase Rnf157 isoform X2 n=3 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771D37C)

HSP 1 Score: 66.2 bits (160), Expect = 9.970e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS +ECV+C+C+ R+ LI+PCRHL +C+GCAD L      CP CR P+  +++
Sbjct:  245 DSGSECVICMCDVRDTLILPCRHLCLCNGCADSLRYQANNCPICRAPFRALLQ 297

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: UPI000626C06B (E3 ubiquitin ligase RNF157 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI000626C06B)

HSP 1 Score: 66.2 bits (160), Expect = 1.070e-7
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS +ECV+C+C+ R+ LI+PCRHL +C+GCAD L      CP CR P+  +++
Sbjct:  282 DSGSECVICMCDVRDTLILPCRHLCLCNGCADSLRYQANNCPICRAPFRALLQ 334

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: A0A6J0C2B6_NEOLC (RING-type E3 ubiquitin transferase n=8 Tax=Tenthredinoidea TaxID=85772 RepID=A0A6J0C2B6_NEOLC)

HSP 1 Score: 66.2 bits (160), Expect = 1.070e-7
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS +ECV+C+C+ R+ LI+PCRHL +C+GCAD L      CP CR P+  +++
Sbjct:  283 DSGSECVICMCDVRDTLILPCRHLCLCNGCADSLRYQANNCPICRAPFRALLQ 335

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: A0A7J7QCI4_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QCI4_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-7
Identity = 23/51 (45.10%), Postives = 36/51 (70.59%), Query Frame = 0

Query:  564 ECVVCLCERRNALIMPCRHLVICSGCADILVD----GLCPFCRRPYADIIK 610
            +C+VC+   R+ L++PC+HLV+CSGCA+ L      G CP+CR+P A  ++
Sbjct:    7 KCIVCMERLRDVLLLPCKHLVLCSGCAEQLEGRGALGSCPYCRQPCAQRVR 57

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: A0A147BGE7_IXORI (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BGE7_IXORI)

HSP 1 Score: 65.5 bits (158), Expect = 1.740e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS  ECV+C+CE R+ LI+PCRHL +CS CAD L      CP CR P+  +++
Sbjct:  245 DSGAECVICMCESRDTLILPCRHLCLCSCCADSLRYQANNCPICRAPFRALLQ 297

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BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: UPI000C7740B5 (E3 ubiquitin-protein ligase MGRN1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7740B5)

HSP 1 Score: 65.1 bits (157), Expect = 1.950e-7
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS  ECVVC+C+ R+ LI+PCRHL +C+ CAD L      CP CR P+  +++
Sbjct:   60 DSGAECVVCMCDNRDTLILPCRHLCLCNACADSLRYQANNCPICRAPFRALLQ 112

[Close]

BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: A0A6B0VEF1_IXORI (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0VEF1_IXORI)

HSP 1 Score: 65.5 bits (158), Expect = 1.950e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS  ECV+C+CE R+ LI+PCRHL +CS CAD L      CP CR P+  +++
Sbjct:  124 DSGAECVICMCESRDTLILPCRHLCLCSCCADSLRYQANNCPICRAPFRALLQ 176

[Close]

BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Match: A0A6P7U7M0_IXOSC (RING-type E3 ubiquitin transferase n=8 Tax=Ixodes TaxID=6944 RepID=A0A6P7U7M0_IXOSC)

HSP 1 Score: 65.5 bits (158), Expect = 2.280e-7
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query:  560 DSETECVVCLCERRNALIMPCRHLVICSGCADIL--VDGLCPFCRRPYADIIK 610
            DS  ECV+C+CE R+ LI+PCRHL +CS CAD L      CP CR P+  +++
Sbjct:  274 DSGAECVICMCESRDTLILPCRHLCLCSCCADSLRYQANNCPICRAPFRALLQ 326

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1453.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI0003F0A194	1.140e-8	49.06	RING finger protein 157-like n=1 Tax=Saccoglossus ...	[more]
B7PGD7_IXOSC	9.510e-8	50.94	RING-type E3 ubiquitin transferase n=2 Tax=Ixodes ...	[more]
UPI000771D37C	9.970e-8	49.06	E3 ubiquitin ligase Rnf157 isoform X2 n=3 Tax=Ceph...	[more]
UPI000626C06B	1.070e-7	49.06	E3 ubiquitin ligase RNF157 n=1 Tax=Orussus abietin...	[more]
A0A6J0C2B6_NEOLC	1.070e-7	49.06	RING-type E3 ubiquitin transferase n=8 Tax=Tenthre...	[more]
A0A7J7QCI4_9CHLO	1.240e-7	45.10	RING-type domain-containing protein n=1 Tax=Scened...	[more]
A0A147BGE7_IXORI	1.740e-7	50.94	RING-type E3 ubiquitin transferase (Fragment) n=1 ...	[more]
UPI000C7740B5	1.950e-7	49.06	E3 ubiquitin-protein ligase MGRN1-like n=1 Tax=Eur...	[more]
A0A6B0VEF1_IXORI	1.950e-7	50.94	RING-type E3 ubiquitin transferase (Fragment) n=1 ...	[more]
A0A6P7U7M0_IXOSC	2.280e-7	50.94	RING-type E3 ubiquitin transferase n=8 Tax=Ixodes ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 190..252 e-value: 9.4E-5 score: 22.2
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 183..279 e-value: 4.2E-6 score: 28.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 183..256
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 562..606 e-value: 9.7E-12 score: 44.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 484..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..91
None	No IPR available	PANTHER	PTHR22996:SF0	LP12254P-RELATED	coord: 556..610
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 186..252 score: 9.770521
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 560..607
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 551..613 e-value: 4.0E-12 score: 47.4
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 424..493 e-value: 4.9E-8 score: 34.6
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 425..484
IPR045194	E3 ubiquitin-protein ligase MGRN1/RNF157-like	PANTHER	PTHR22996	MAHOGUNIN	coord: 556..610
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 565..602 score: 10.04028

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1453	contig	P-wetherbeei_contig1453:688..2683 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1453.1.1	mRNA_P-wetherbeei_contig1453.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1453 2..3061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1453.1.1 ID=prot_P-wetherbeei_contig1453.1.1|Name=mRNA_P-wetherbeei_contig1453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=616bp
MLSTRVATLLTLPLEDAIRNNDVPLLERLVDLLKDRSGDDYARERRLALV
HLAGLQEWQQQQRQQAAATSDGPPTASTGGKGAVPDAALARTGWPPPVAA
AAAARKPSAKAAAATAATTAVAEVAATAAVPKAVVAASAAAAKGFPVKGT
HAGNNAGDEGGGKPLAPPPPPLTNPYLSLPPPGESDTLYHFPIPNRIAGW
VVGHNGQRIKDYNRRFPGTAMVVRPGGKLPDAPQFIKIKGDPEVIATAVK
FLQGALAKAPKPKPGQPGDGQLILAEGGAYFAPPVVACDGGGKGDSGGGS
GCIDDNDGGGGCDGDGGGVGGRSVLAAAYAQVAAAAAPSTACAAGAKGAR
GASAAPQTGAPHGNGVAAPLRHQSPQNATLSMPQARDAARIDAVGNGSRI
DCGTASRAGAGAAAAAAAPITGEYAELHAFLSGVGLQPFYDAFVEQGWDL
ETVVWHAEDPHLSELGLRVGHKVKLRSAIVEERRRRGKPTRIELHATSPP
PQHLQLQQQQQQQQGQQQQVASEGHAVAAALAPAARDNAGGAIATAGGAA
VAAAAAAATDSETECVVCLCERRNALIMPCRHLVICSGCADILVDGLCPF
CRRPYADIIKNIIIA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004088	KH_dom_type_1
IPR036612	KH_dom_type_1_sf
IPR013083	Znf_RING/FYVE/PHD
IPR013761	SAM/pointed_sf
IPR045194	MGRN1/RNF157-like
IPR001841	Znf_RING