prot_P-wetherbeei_contig14427.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14427.1.2
Unique Nameprot_P-wetherbeei_contig14427.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length372
Homology
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A6H5JHY1_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY1_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 4.170e-47
Identity = 106/200 (53.00%), Postives = 133/200 (66.50%), Query Frame = 0
Query:   99 NLIVPELRLTPVATQYDLRAIAIPQGTVLYHDHTVPSLEPSFLYHFRQASTQARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGD 298
            +L++P  R TP AT   L   AIP   +   D+TVPSLE +FL  +R A++   S KL A+  DL      +P AKFV+FSQ+  V+D A   L   GI   +I G      R +AV SF+ D ++R ILLTTG+AAAGLTLTAA  +YMLDP  SAADEAQ+L RAHRIGQT  VRCV+FYM++SVEERLLALR+  G+
Sbjct:  188 SLVIPTFRFTPTATAAQLSG-AIPPPVMFPRDNTVPSLEQTFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPTAKFVIFSQYPQVVDRAGIVLSARGIRSTSIVGGRTRVERSSAVSSFTNDPSIRVILLTTGSAAAGLTLTAASTVYMLDPVWSAADEAQALNRAHRIGQTHTVRCVVFYMKDSVEERLLALRHSKGN 386          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 4.740e-36
Identity = 94/200 (47.00%), Postives = 120/200 (60.00%), Query Frame = 0
Query:   99 NLIVPELRLTPVATQYDLRAIAIPQGTVLYHDHTVPSLEPSFLYHFRQASTQARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGD 298
            +L++P  R TP AT                          +FL  +R A++   S KL A+  DL      +P AKFV+FSQ+  V+D A   L   GI   +I G      R +AV SF+ D +++ ILLTTG+AAAGLTLTAA  +YMLDP  SAADEAQ+L RAHRIGQT  VRCV+FYM++SVEERLLALR+  G+
Sbjct: 1307 SLVIPTFRFTPTATA-------------------------TFLSQYRAATSSQSSVKLDALVRDLDTTLLHDPTAKFVIFSQYPQVVDRAGIVLSARGIRSTSIVGGRTRVERSSAVSSFTNDPSIKVILLTTGSAAAGLTLTAASTVYMLDPVWSAADEAQALNRAHRIGQTHTVRCVVFYMKDSVEERLLALRHSKGN 1481          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A835YV89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV89_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.820e-35
Identity = 100/207 (48.31%), Postives = 125/207 (60.39%), Query Frame = 0
Query:  115 DLRAIAIPQGTVLY-HDHTVPSLEPSFLYHFRQASTQ-ARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQ----------------------SLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSG 297
            DL+AI  P G  L+  D + PSL+P FL H+R AS   A  AKL A+  D++ V   EP AKFVVFS     L  AA  L    +  VTI G+    RR  AV  F+TD +VR +LL  G+AAAGLTLTAA  +YML+P+ +AADEAQ                      +L+RAHRIGQT +VRCVIFY   ++EERLLALR++SG
Sbjct:  385 DLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESG 591          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A4D9D770_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D770_9STRA)

HSP 1 Score: 113 bits (283), Expect = 9.530e-24
Identity = 77/197 (39.09%), Postives = 112/197 (56.85%), Query Frame = 0
Query:  102 VPELRLTPVATQYDLRAIAIPQGTVLYHDHTVPSLEPSFLYHFRQASTQARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQT-QAVRCVIFYMRNSVEERLLALRNDSG 297
            +P++   P A +  L+ +  P       D+++PSLEP+FL H+R  S    SAK+ A+   L+   +++P AKFVVFSQF          L   G   V++        RQ AV +FS+D  V+ IL+  G  AAGLTLTAA  L +L+PS +  DEAQ+++R HRIGQ   +V   + +   +VEER+L +R D G
Sbjct:  544 IPQVGCPPAADEATLQRLPAPFACG--RDNSLPSLEPAFLAHYRNTS-MVPSAKMQALVGILESTLSSDPSAKFVVFSQFP--FTTVKPCLDQHGFACVSVTAQCKMADRQQAVGAFSSDPDVKVILVGMGVGAAGLTLTAASTLILLEPSHNLGDEAQAMSRIHRIGQAASSVEIFVLFTPRTVEERMLKVRQDQG 735          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: C1EH46_MICCC (SNF2 super family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH46_MICCC)

HSP 1 Score: 104 bits (259), Expect = 1.580e-20
Identity = 83/224 (37.05%), Postives = 117/224 (52.23%), Query Frame = 0
Query:  105 LRLTPVATQYDLRAIAIPQGT--VLYHDHTVPSLEPS---FLYHFRQASTQARSAKLAAMRADLQEVSAAEPGA-KFVVFSQFQGVLDAAAAALRLDGIGHVTIG-----GSADARRR----------------QNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGDGGA 301
            +R TP A   +   + +P G     Y D   P+L      FL H  +AS + +S K++A+  DL+E  AA  G+ K VVFSQ +  L  A   LR +GIG  ++G     G  +                    + A+  F  D A + +LL  G+AAAGLTLT A ++ +L+P  S  DEAQ+  R HRIGQT+ VRCV +++  +VEERLLA R    + GA
Sbjct: 1432 VRFTPAARPSEFSRLPLPDGENPADYRDGRYPALSMDGGRFLAHLHRASMR-QSPKMSALVRDLREALAAPGGSGKAVVFSQLRDALAHAEQVLRWEGIGCESVGVHNRGGGVNXXXXXXXXXXXXXXXXXXXXEGAIARFRDDPATQVLLLHAGSAAAGLTLTQADLVVLLEPFLSPGDEAQAANRVHRIGQTRPVRCVTYFVEGTVEERLLAFRTRQREFGA 1654          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A7S0S928_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S928_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 5.610e-20
Identity = 82/212 (38.68%), Postives = 117/212 (55.19%), Query Frame = 0
Query:  105 LRLTPVATQYDLRAIAIPQGT--VLYHDHTVPSLEPS---FLYHFRQASTQARSAKLAAMRADLQEVSAAEPGA--KFVVFSQFQGVLDAAAAALRLDGIGHVTIG----------------GSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALR 293
            +R +  AT  +   + +P+G     Y   + P+L      FL H  +A+ + RS K+ A+ ADL+E +   PGA  K VVFSQ +  L  A AAL  +GIG  ++G                G+      + A+  F  D  V+ +LL  G+AAAGLTLT A ++ +L+P  SA DEAQ+  R HRIGQT+ VRCV +++  +VEERLLA R
Sbjct:  639 VRFSAAATPAEFGRLPLPRGEDPAQYRSGSFPALSMDGGYFLAHCHRAAMR-RSPKINALVADLRE-ALNRPGAAGKVVVFSQQRDALAHADAALTGEGIGTESVGVKGVRSAARDGAVAGGGAGKQGDYEGAIQRFRDDPDVKVLLLHAGSAAAGLTLTQADLVVLLEPFLSAGDEAQAANRVHRIGQTRPVRCVTYFVEGTVEERLLAYR 848          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A7S0PUJ4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PUJ4_MICPS)

HSP 1 Score: 98.2 bits (243), Expect = 1.590e-19
Identity = 81/223 (36.32%), Postives = 114/223 (51.12%), Query Frame = 0
Query:  106 RLTPVATQYDLRAIAIPQGT--VLYHDHTVPSLEPS---FLYHFRQASTQARSAKLAAMRADLQEVSAAEPGA--KFVVFSQFQGVLDAAAAALRLDGIG--------------------HVTIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGDGGA 301
            R TP A   +   + +P+G     Y D   P+L      FL H  +A+ + +S K++A+  DL+E S A PG   K VVFSQ +  L  A   LR +GIG                             +   + A+  F  D +V+ +LL  G+AAAGLTLT A ++ +L+P  S  DEAQ+  R HRIGQT+ VRCV +++  +VEERLLA R    + GA
Sbjct:    2 RSTPPARPSEFSRLPLPRGENPADYRDGRYPALSMDGGRFLAHLHRAAMR-QSPKMSALVRDLRE-SLASPGGSGKAVVFSQLRDALAHAEQVLRWEGIGCESXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGEGAIARFRDDPSVQVLLLHAGSAAAGLTLTQADLVILLEPFLSPGDEAQAANRVHRIGQTRPVRCVTYFVEGTVEERLLAFRTRQREFGA 222          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A7S0GPK4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GPK4_MICPS)

HSP 1 Score: 100 bits (249), Expect = 2.200e-19
Identity = 78/197 (39.59%), Postives = 105/197 (53.30%), Query Frame = 0
Query:  140 FLYHFRQASTQARSAKLAAMRADLQEVSAAEPGA--KFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSA--------DARRRQNAVVS-----------------------FSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGDGGASS 303
            FL H  +A  + RS K+AA+ ADL+    A PGA  K VVFSQ +  L   + AL  +G+G+  + G+A         A R +NA  +                       F  D A R +LL  G AAAGLTLT A ++ +L+P  S  DEAQ+  R HRIGQT+AVRCV +++R +VEERLLA R    + G  +
Sbjct:  431 FLAHVHRACAR-RSPKIAALVADLRS-HFATPGASGKAVVFSQLRDALSKVSEALTWEGVGNALVDGNATSSSSAGRSASRHRNAATASDDNDGNVVPVRPEDAAASAVRRFRDDPACRVLLLHAGTAAAGLTLTHADLVILLEPFLSPGDEAQAANRVHRIGQTRAVRCVTYFVRGTVEERLLAFRERQAEFGGEA 625          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A7S3NHU0_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHU0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-17
Identity = 63/166 (37.95%), Postives = 93/166 (56.02%), Query Frame = 0
Query:  134 PSLEPSFLYHFRQASTQARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTI------GGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALR 293
            P++    L +   A  QA SAK+A + +D++ +   +P  K VVF+  +  ++  AA L L GIGH T+      G S   RR QN       D      ++  G AAAGLTLTAA  +++L+P  S   E Q++ R HRIGQ + V  + +++RNS+EER+LA R
Sbjct: 1377 PNIPLELLRYLSVARQQAHSAKIALLISDIKRILRDDPCEKMVVFTTIRAAVEHVAADLYLSGIGHETLVTGNSSGISDRVRRWQN-------DDTCNVFVVNAGVAAAGLTLTAARYMFLLEPFLSKGQEIQAMNRCHRIGQEREVHTITYFVRNSIEERILAYR 1535          
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Match: A0A8J5XH39_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH39_DIALT)

HSP 1 Score: 94.4 bits (233), Expect = 3.400e-17
Identity = 82/202 (40.59%), Postives = 104/202 (51.49%), Query Frame = 0
Query:  108 TPVAT--QYD--------LRAIAIP-----QGTVLYHDHTVPSLEPSFLYHFRQASTQARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHVTIGGSADARRRQ-NAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLDPSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALR 293
            TP AT  QY+        L A AIP        +L H      LEP    +  Q     RSAKL  + ADL  V A     K VV S  + +++  + AL  DG+GH  +  SA  R  Q  AV  ++ D A+   LL  G AAAGLTL AAH +++LD  P  A+E Q+L R HRIGQ   V C ++Y   +VEERLLA R
Sbjct: 1479 TPAATRAQYEACPPAREALMARAIPALPLFDARLLDHLCAATGLEPPAPPNASQPRAH-RSAKLRRLLADLAPVLARRE--KAVVLSAHRLMIEYVSRALADDGVGHRKVCASAGRREAQARAVSEWAADPALPVFLLHAGVAAAGLTLVAAHHVFLLDVLPYEAEEQQALNRCHRIGQRHDVTCTVYYAPGTVEERLLAFR 1677          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14427.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHY1_9PHAE4.170e-4753.00Helicase C-terminal domain-containing protein n=1 ... [more]
D7G2K8_ECTSI4.740e-3647.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV89_9STRA3.820e-3548.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D770_9STRA9.530e-2439.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
C1EH46_MICCC1.580e-2037.05SNF2 super family n=1 Tax=Micromonas commoda (stra... [more]
A0A7S0S928_9CHLO5.610e-2038.68Hypothetical protein (Fragment) n=3 Tax=Mantoniell... [more]
A0A7S0PUJ4_MICPS1.590e-1936.32Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0GPK4_MICPS2.200e-1939.59Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S3NHU0_9STRA1.390e-1737.95Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A8J5XH39_DIALT3.400e-1740.59Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 186..269
e-value: 1.4E-8
score: 44.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 167..269
e-value: 3.2E-8
score: 33.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 162..308
score: 10.374486
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 134..298
e-value: 1.5E-36
score: 127.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 146..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..372
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 146..295
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 153..281
e-value: 4.81632E-17
score: 74.8204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14427contigP-wetherbeei_contig14427:97..1582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14427.1.2mRNA_P-wetherbeei_contig14427.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14427 97..1592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14427.1.2 ID=prot_P-wetherbeei_contig14427.1.2|Name=mRNA_P-wetherbeei_contig14427.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=372bp
MPAVCGIWNNIFCRGGGGSSSGGGDSSSGGGGSSSGSGGGDASGSGGGGG
SSRGGGDSRGGGSFSGQNGRAGSNTPASNASATASPAPAPGAAAMAPTNL
IVPELRLTPVATQYDLRAIAIPQGTVLYHDHTVPSLEPSFLYHFRQASTQ
ARSAKLAAMRADLQEVSAAEPGAKFVVFSQFQGVLDAAAAALRLDGIGHV
TIGGSADARRRQNAVVSFSTDRAVRAILLTTGAAAAGLTLTAAHVLYMLD
PSPSAADEAQSLARAHRIGQTQAVRCVIFYMRNSVEERLLALRNDSGDGG
ASSGGGAGSGGGSGSGGGTAGGGASSGDGGASSGGGAGSGGGGGGGGRRG
GGRRRGYGGRGRGARRRRGGDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase