prot_P-wetherbeei_contig1436.4.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1436.4.2
Unique Nameprot_P-wetherbeei_contig1436.4.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length277
Homology
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BLAST of mRNA_P-wetherbeei_contig1436.4.2 vs. uniprot
Match: A0A836CBF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.670e-11
Identity = 93/298 (31.21%), Postives = 124/298 (41.61%), Query Frame = 0 
Query:    1 MRRAGVVAAVNTPPPPERDEPRETQVKLCL--RLKAPQLP------AAADSAGGTGGGRQLPGKQTRRSGHGSGSXXXXXXXXRHGGVAAAKGSNAFHVDLSRFRSVLVIRAE-RIGPAGGVALARDLSRGCCPALRHLLLPYNGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------KIFAHQVL---GGVWCGVAEVGLAGCGIRDAGLLAVFSAVTATGVDIPRLQR-LSLRANSASLAARQRMAPTPRFW 274
            MRRAGV A VN PP P  D P E    + +  R ++P+ P      A AD+       ++L  +Q  R+      XXXXXX  R   +A  +  + F++ LSR R++  +R    +GP GGV LAR+LS   C  L  L LP   L+                XXXXXX                                                     +  AHQ+L   G  W GVA +GLA CG+ DAG LA++ A+   GV +    R + LR N  S AAR+ M  T   W
Sbjct:  362 MRRAGVTAGVNAPPAPPADVPHEADESVVIWPRAQSPRSPXXXPQAAVADAQDA----KELD-RQASRASTAXXXXXXXXXQRRRVWLAQQEAGSYFNLQLSRMRAITRLRVRGALGPRGGVPLARELSAASCLTLLELRLPRCALTDAGLAPVLAALAHGSGXXXXXXGSAAPLLATLDLRENGLTAAAVQLFGAARDGNGLRALRDLDLGGNAALGDGGARTLAHQLLASRGATWRGVARLGLAHCGVGDAGALALWRALDGAGVLLESPPRCVCLRDNRVSAAARRAMGATAPLW 654
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BLAST of mRNA_P-wetherbeei_contig1436.4.2 vs. uniprot
Match: A0A7S3Y1R3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1R3_HETAK)

HSP 1 Score: 71.2 bits (173), Expect = 9.960e-11
Identity = 51/137 (37.23%), Postives = 64/137 (46.72%), Query Frame = 0 
Query:    1 MRRAGVVAAVNTPPPPERDEPRETQVKLCLRLKAPQLPAAADSAGGTGGGRQLPGKQTRRSGHGSGSXXXXXXXXRHGGVAAAKGSNAFHVDLSRFRSVLVIRAERIGPAGGVALARDLSRGCCPALRHLLLPYNGL 137
            MRRAG +A  N  PPPE ++ RET   L LR+     P   D+  G         ++ R+ G                      GS  F VDL R+R V  I A+++G AGG ALA DL  G CP L HL L +N L
Sbjct:   43 MRRAGTIAGANARPPPEVEDDRETAKLLHLRMN----PHPPDAGAGP--------RRRRKKG---------------------VGSKLFTVDLKRYRMVETIHAQKLGEAGGRALAGDLLLGFCPGLGHLRLGWNDL 146
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1436.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CBF8_9STRA4.670e-1131.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y1R3_HETAK9.960e-1137.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 124..151
e-value: 9.6
score: 10.2
coord: 154..181
e-value: 0.82
score: 17.7
coord: 184..211
e-value: 2.4
score: 14.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 87..209
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 106..257
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 90..268
e-value: 1.7E-20
score: 74.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 185..203
e-value: 0.029
score: 14.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1436contigP-wetherbeei_contig1436:4674..5833 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1436.4.2mRNA_P-wetherbeei_contig1436.4.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1436 4644..6107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1436.4.2 ID=prot_P-wetherbeei_contig1436.4.2|Name=mRNA_P-wetherbeei_contig1436.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp
MRRAGVVAAVNTPPPPERDEPRETQVKLCLRLKAPQLPAAADSAGGTGGG
RQLPGKQTRRSGHGSGSHGGGTHGGRHGGVAAAKGSNAFHVDLSRFRSVL
VIRAERIGPAGGVALARDLSRGCCPALRHLLLPYNGLSPRGAAALLEAFA
GGAGAAIEALDLSANGLGPAAVAALGRAIAAGGLPRLSAVELGGNKIGDE
GAKIFAHQVLGGVWCGVAEVGLAGCGIRDAGLLAVFSAVTATGVDIPRLQ
RLSLRANSASLAARQRMAPTPRFWAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt