prot_P-wetherbeei_contig1433.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1433.1.1
Unique Nameprot_P-wetherbeei_contig1433.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length221
Homology
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A482V1I8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1I8_9ARCH)

HSP 1 Score: 85.5 bits (210), Expect = 1.690e-18
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITG 41
            MDNTARLWDVETGEC+HTLLGHTAEIVSL+FDTQGQRIITG
Sbjct:   13 MDNTARLWDVETGECVHTLLGHTAEIVSLDFDTQGQRIITG 53
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A0W8D668_PHYNI (1-phosphatidylinositol 3-phosphate 5-kinase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D668_PHYNI)

HSP 1 Score: 84.7 bits (208), Expect = 1.280e-17
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MDNTA+LWDVETG+ LHTL GHTAEIVSLNFDTQG+RIITGSFD
Sbjct:    1 MDNTAKLWDVETGQELHTLFGHTAEIVSLNFDTQGERIITGSFD 44
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A0P1AZC6_PLAHL (Wd domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZC6_PLAHL)

HSP 1 Score: 84.7 bits (208), Expect = 1.820e-16
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MDNTA+LWDVETG+ LHTL GHTAEIVSLNFDTQG+RIITGSFD
Sbjct:    1 MDNTAKLWDVETGQELHTLFGHTAEIVSLNFDTQGERIITGSFD 44
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A7S0NLQ6_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NLQ6_MICPS)

HSP 1 Score: 65.5 bits (158), Expect = 2.160e-9
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MDNTA+LWDVETG  + TL GHTAEIVSL F+T G  I+TG FD
Sbjct:    1 MDNTAKLWDVETGTEVCTLAGHTAEIVSLCFNTSGDTIVTGGFD 44
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A218UZ39_9PASE (Dynein assembly factor with WDR repeat domains 1 n=1 Tax=Lonchura striata domestica TaxID=299123 RepID=A0A218UZ39_9PASE)

HSP 1 Score: 63.9 bits (154), Expect = 6.820e-9
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MD TA+LWD+E GE + TL GH+AEI++L+F+T G RIITGSFD
Sbjct:    1 MDTTAKLWDLEKGEEVATLNGHSAEIIALSFNTTGDRIITGSFD 44
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A8C5SVK3_LATLA (Uncharacterized protein n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5SVK3_LATLA)

HSP 1 Score: 62.0 bits (149), Expect = 3.820e-8
Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MD TARLWD++ GE +  L GH+AEI++L+F+T G +IITGSFD
Sbjct:    1 MDTTARLWDIQNGEEVVRLTGHSAEIIALSFNTTGDKIITGSFD 44
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A5E4A6W9_MARMO (Uncharacterized protein n=1 Tax=Marmota monax TaxID=9995 RepID=A0A5E4A6W9_MARMO)

HSP 1 Score: 56.6 bits (135), Expect = 3.490e-6
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLL--------GHTAEIVSLNFDTQGQRIITGSFD 44
            MD TA+LW+ E GE + TL         GH AEI+SL FDT G RIITGSFD
Sbjct:    1 MDTTAKLWNTEDGEEMCTLTVCRCVGVSGHLAEIISLAFDTSGNRIITGSFD 52
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A674C646_SALTR (Uncharacterized protein n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674C646_SALTR)

HSP 1 Score: 55.1 bits (131), Expect = 1.120e-5
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MD TA+ WDV+TGE     +GH+AEI+SL+F+T G +++TGSFD
Sbjct:  105 MDTTAKRWDVQTGE----EVGHSAEIISLSFNTVGDQLVTGSFD 144
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A674C5E8_SALTR (Uncharacterized protein n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674C5E8_SALTR)

HSP 1 Score: 55.1 bits (131), Expect = 1.510e-5
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    1 MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFD 44
            MD TA+ WDV+TGE     +GH+AEI+SL+F+T G +++TGSFD
Sbjct:  121 MDTTAKRWDVQTGE----EVGHSAEIISLSFNTVGDQLVTGSFD 160
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BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Match: A0A4W3GSB6_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GSB6_CALMI)

HSP 1 Score: 52.8 bits (125), Expect = 1.870e-5
Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:    2 DNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSF 43
            D T RLWD+E+G CLHTLLGH A +  + +D  G+R+++G++
Sbjct:   23 DATLRLWDIESGRCLHTLLGHVAAVRCVQYD--GRRVVSGAY 62
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1433.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A482V1I8_9ARCH1.690e-1895.12Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0W8D668_PHYNI1.280e-1788.641-phosphatidylinositol 3-phosphate 5-kinase n=1 Ta... [more]
A0A0P1AZC6_PLAHL1.820e-1688.64Wd domain-containing protein n=1 Tax=Plasmopara ha... [more]
A0A7S0NLQ6_MICPS2.160e-970.45Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A218UZ39_9PASE6.820e-965.91Dynein assembly factor with WDR repeat domains 1 n... [more]
A0A8C5SVK3_LATLA3.820e-861.36Uncharacterized protein n=1 Tax=Laticauda laticaud... [more]
A0A5E4A6W9_MARMO3.490e-657.69Uncharacterized protein n=1 Tax=Marmota monax TaxI... [more]
A0A674C646_SALTR1.120e-556.82Uncharacterized protein n=1 Tax=Salmo trutta TaxID... [more]
A0A674C5E8_SALTR1.510e-556.82Uncharacterized protein n=1 Tax=Salmo trutta TaxID... [more]
A0A4W3GSB6_CALMI1.870e-550.00Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 38..52
score: 37.47
coord: 80..94
score: 39.9
coord: 164..178
score: 29.62
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 138..177
e-value: 1.4E-8
score: 44.5
coord: 54..93
e-value: 6.4E-8
score: 42.3
coord: 180..219
e-value: 8.0E-11
score: 52.0
coord: 12..51
e-value: 1.7E-10
score: 50.9
coord: 96..135
e-value: 4.7E-10
score: 49.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 13..51
e-value: 2.2E-8
score: 34.6
coord: 139..176
e-value: 1.4E-6
score: 28.9
coord: 55..93
e-value: 3.6E-6
score: 27.6
coord: 97..135
e-value: 3.1E-7
score: 31.0
coord: 181..218
e-value: 4.1E-9
score: 36.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 103..144
score: 12.246197
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..18
score: 9.706414
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 61..102
score: 13.917108
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 19..60
score: 17.125254
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 187..220
score: 14.384962
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 145..186
score: 16.623981
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..146
e-value: 1.0E-52
score: 181.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 147..220
e-value: 5.9E-30
score: 106.5
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 1..219
NoneNo IPR availablePANTHERPTHR44156:SF1DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1coord: 1..219
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 145..181
score: 12.446495
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 61..98
score: 10.337415
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 187..220
score: 13.211037
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 103..135
score: 10.15287
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 19..56
score: 13.079218
NoneNo IPR availableCDDcd00200WD40coord: 2..219
e-value: 2.2245E-72
score: 219.899
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 80..94
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 164..178
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 38..52
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1433contigP-wetherbeei_contig1433:1553..3643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1433.1.1mRNA_P-wetherbeei_contig1433.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1433 318..4313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1433.1.1 ID=prot_P-wetherbeei_contig1433.1.1|Name=mRNA_P-wetherbeei_contig1433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
MDNTARLWDVETGECLHTLLGHTAEIVSLNFDTQGQRIITGSFDHTVKVW
DVRSGQCAHTLAGHHGEISSTQFNYSSDLCLSGSIDRTCKVWDVASGQCV
HTLRGHNDEILDVSFNATGSRLVTASADGTSRVYNTVNGACQAILIGHDS
EISKVAFNPQGTRILTASSDKTARLWEAETGDCVQTLEGHTDEIFSCAFN
YEGDTVITGSKDNTCRIWRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf