prot_P-wetherbeei_contig1420.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1420.3.1
Unique Nameprot_P-wetherbeei_contig1420.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length300
Homology
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BLAST of mRNA_P-wetherbeei_contig1420.3.1 vs. uniprot
Match: D8LQ14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ14_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.080e-34
Identity = 97/243 (39.92%), Postives = 142/243 (58.44%), Query Frame = 0 
Query:   21 PPIFTQLQQIQQEILVPALHLSPAATPEGLESR-EGLRGSRITNERFSGAAVSNMRVSYLQAPGIEVFSSAVY--PTCDVPVLGVSAMLMGPSCCMVAVDFQPLLRR---AAADADDPALAPLLAIKRRHPRLQQPLVRDTYRGSPFFSDGMLYARFA-NPVAD--LESEVLPAFREAVEAYAAVVAAAPL--PSADTAVAVRRRISEFDAFHAEREQAHSVVKASFGEAWANQYIERFLYPH 252
            P  F  L + Q   L   L L  +  P  +++     R SR+ N  ++G  V  +R+SYL  P ++V+S+  Y  P  D P+LG+SAM MG S  ++A+D QPL      AA  AD  A A L AI+ ++P+L + L +D Y+GSPFFSD M+YAR+     AD  ++  V+PAFRE ++AY  +V  AP   P + T  AV  R +EFD FHAEREQ   ++ + FG ++A+ Y+  FL+ +
Sbjct:  123 PLFFADLLRTQASTLEFELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMG-SVRVLALDLQPLFPGEDYAAKYAD--ANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECMQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAY 362
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1420.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ14_ECTSI2.080e-3439.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1500.20coord: 10..252
e-value: 2.8E-37
score: 130.6
IPR009249Ferredoxin-dependent bilin reductasePFAMPF05996Fe_bilin_redcoord: 38..251
e-value: 7.4E-28
score: 97.8
IPR009249Ferredoxin-dependent bilin reductasePANTHERPTHR34557PHYTOCHROMOBILIN:FERREDOXIN OXIDOREDUCTASE, CHLOROPLASTICcoord: 38..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1420contigP-wetherbeei_contig1420:4521..5926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1420.3.1mRNA_P-wetherbeei_contig1420.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1420 3792..5956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1420.3.1 ID=prot_P-wetherbeei_contig1420.3.1|Name=mRNA_P-wetherbeei_contig1420.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=300bp
MIAFPRCPVDHAVEASKAKPPPIFTQLQQIQQEILVPALHLSPAATPEGL
ESREGLRGSRITNERFSGAAVSNMRVSYLQAPGIEVFSSAVYPTCDVPVL
GVSAMLMGPSCCMVAVDFQPLLRRAAADADDPALAPLLAIKRRHPRLQQP
LVRDTYRGSPFFSDGMLYARFANPVADLESEVLPAFREAVEAYAAVVAAA
PLPSADTAVAVRRRISEFDAFHAEREQAHSVVKASFGEAWANQYIERFLY
PHACLLAAEGGGVGGASAGSGGAGGAVVTALKPPEAAAAAAAASTARTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009249Ferredoxin-dep_bilin_Rdtase