prot_P-wetherbeei_contig14183.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A835ZJ72_9STRA (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ72_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.960e-21 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query: 6 VSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
VS+ITNDGRN+VG RGHD INV+L+ C ERV+S A VE VPLGLYI+RGDN+
Sbjct: 13 VSIITNDGRNIVGNFRGHDHTINVILDSCHERVYSTTAAVEVVPLGLYIVRGDNI 67
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: L1JS17_GUITC (U6 snRNA-associated Sm-like protein LSm8 n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JS17_GUITC) HSP 1 Score: 86.7 bits (213), Expect = 7.970e-21 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 0
Query: 6 VSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
VS+ITNDGRN++GTL+G DQ++NV+LE C ERVFS A VEQV LGLYI+RGDN+
Sbjct: 13 VSIITNDGRNIIGTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLYIVRGDNI 67
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A0M0JV94_9EUKA (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JV94_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 1.610e-20 Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 1 YSAELVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
Y ++V ++TNDGRN+VG L+G DQ NV+LE C ERVFS A VEQV LGLYI+RGDN+
Sbjct: 8 YVDKVVQIVTNDGRNIVGVLKGFDQTTNVILEDCNERVFSSTAGVEQVALGLYIVRGDNI 67
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A0H5RNA2_9EUKA (U6 snRNA-associated Sm-like protein LSm8 (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RNA2_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 2.110e-20 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 5 LVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
+VSVITNDGRNL+G LRG DQ IN+VLE C ERV+S A VEQV LGLY++RGDN+
Sbjct: 35 VVSVITNDGRNLIGRLRGFDQCINIVLEECHERVYSTTAGVEQVVLGLYVVRGDNI 90
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A0G4IR77_PLABS (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IR77_PLABS) HSP 1 Score: 85.1 bits (209), Expect = 3.150e-20 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0
Query: 5 LVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
+VSVITNDGRN+VG L+G DQ IN+VLE C ERV+S A VEQV LGLY+IRGDN+
Sbjct: 11 VVSVITNDGRNIVGRLKGFDQCINIVLEECHERVYSTTAGVEQVVLGLYVIRGDNI 66
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: W7TRW1_9STRA (U6 snRNA-associated Sm-like protein LSm8 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRW1_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 6.180e-20 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0
Query: 5 LVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
++ VITNDGRN+VG L+G DQ N++L+ C ERVFS A VEQVPLGLYI+RGDN+
Sbjct: 36 VICVITNDGRNIVGVLKGFDQTTNIILQECHERVFSTTAGVEQVPLGLYIVRGDNI 91
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A444TUL9_ARMVU (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TUL9_ARMVU) HSP 1 Score: 84.3 bits (207), Expect = 6.530e-20 Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query: 1 YSAELVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
Y LVSVIT+DGRN+VGTL+G+DQ +N++L+ C ERV+S VEQV LGLYIIRGDN+
Sbjct: 8 YVNHLVSVITSDGRNIVGTLKGYDQTVNLILDECHERVYSTNRGVEQVILGLYIIRGDNV 67
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A2P2I2Z4_9CRUS (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I2Z4_9CRUS) HSP 1 Score: 84.3 bits (207), Expect = 6.530e-20 Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query: 1 YSAELVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
Y LVSVIT DGRN+VGTL+G+DQ INV+L+ C ERV+S VEQV LGLYIIRGDN+
Sbjct: 8 YVNHLVSVITADGRNIVGTLKGYDQSINVILDECHERVYSSNRGVEQVILGLYIIRGDNV 67
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A7S3BPJ4_9EUKA (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BPJ4_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 1.810e-19 Identity = 37/60 (61.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 1 YSAELVSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
Y ++V ++TNDGRN+VG L+G DQ NV+L+ C ERVFS A VEQV LGLYI+RGDN+
Sbjct: 33 YVDKVVQIVTNDGRNIVGVLKGFDQTTNVILDECHERVFSTTAGVEQVVLGLYIVRGDNI 92
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Match: A0A7S1NW03_9EUGL (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NW03_9EUGL) HSP 1 Score: 82.8 bits (203), Expect = 2.880e-19 Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0
Query: 6 VSVITNDGRNLVGTLRGHDQRINVVLEGCKERVFSLVAPVEQVPLGLYIIRGDNM 60
VSVITNDGR++VGTLRG DQ +N+++E ERV+S A VEQVPLGL++IRGDN+
Sbjct: 13 VSVITNDGRHIVGTLRGFDQCVNIIIEDSHERVYSTSAGVEQVPLGLFVIRGDNL 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14183.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig14183.1.1 ID=prot_P-wetherbeei_contig14183.1.1|Name=mRNA_P-wetherbeei_contig14183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bpback to top |